RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 RASSF10A6NK89 507 aa19.7■□□□□ 0.74
LIMS2-216ENST00000494613 KLRK1P26718 216 aa19.7■□□□□ 0.74
LIMS2-216ENST00000494613 USP44Q9H0E7 712 aa19.7■□□□□ 0.74
LIMS2-216ENST00000494613 PLIN1O60240 522 aa19.69■□□□□ 0.74
LIMS2-216ENST00000494613 CT47B1P0C2W7 299 aaPredicted RBP19.69■□□□□ 0.74
LIMS2-216ENST00000494613 KCNJ4P48050 445 aa19.69■□□□□ 0.74
LIMS2-216ENST00000494613 ZNF280AP59817 542 aaPredicted RBP19.69■□□□□ 0.74
LIMS2-216ENST00000494613 TAF7LQ5H9L4 462 aa19.69■□□□□ 0.74
LIMS2-216ENST00000494613 DLK2Q6UY11 383 aa19.69■□□□□ 0.74
LIMS2-216ENST00000494613 SMC4Q9NTJ3 1288 aa19.69■□□□□ 0.74
LIMS2-216ENST00000494613 CELF2O95319 508 aaKnown RBP19.68■□□□□ 0.74
LIMS2-216ENST00000494613 USP17L8P0C7I0 530 aa19.68■□□□□ 0.74
LIMS2-216ENST00000494613 KIF4BQ2VIQ3 1234 aa19.68■□□□□ 0.74
LIMS2-216ENST00000494613 DACT2Q5SW24 774 aa19.68■□□□□ 0.74
LIMS2-216ENST00000494613 TTLL5Q6EMB2 1281 aa19.68■□□□□ 0.74
LIMS2-216ENST00000494613 DCPSQ96C86 337 aaKnown RBP19.68■□□□□ 0.74
LIMS2-216ENST00000494613 MXD3Q9BW11 206 aa19.68■□□□□ 0.74
LIMS2-216ENST00000494613 CNNM1Q9NRU3 951 aa19.68■□□□□ 0.74
LIMS2-216ENST00000494613 NOB1Q9ULX3 412 aaKnown RBP19.68■□□□□ 0.74
LIMS2-216ENST00000494613 PCNTO95613 3336 aa19.68■□□□□ 0.74
LIMS2-216ENST00000494613 SCN9AQ15858 1988 aa19.68■□□□□ 0.74
LIMS2-216ENST00000494613 HSPA1AP0DMV8 641 aaKnown RBP19.67■□□□□ 0.74
LIMS2-216ENST00000494613 HSPA1BP0DMV9 641 aaKnown RBP19.67■□□□□ 0.74
LIMS2-216ENST00000494613 STRIP1Q5VSL9 837 aa19.67■□□□□ 0.74
LIMS2-216ENST00000494613 BICC1Q9H694 974 aaKnown RBP19.67■□□□□ 0.74
LIMS2-216ENST00000494613 BRPF1P55201 1214 aaPredicted RBP19.66■□□□□ 0.74
LIMS2-216ENST00000494613 SCARF1Q14162 830 aa19.66■□□□□ 0.74
LIMS2-216ENST00000494613 C15orf52Q6ZUT6 534 aaKnown RBP19.66■□□□□ 0.74
LIMS2-216ENST00000494613 KRT26Q7Z3Y9 468 aa19.66■□□□□ 0.74
LIMS2-216ENST00000494613 FBXW7Q969H0 707 aa19.66■□□□□ 0.74
LIMS2-216ENST00000494613 PUS3Q9BZE2 481 aaKnown RBP19.66■□□□□ 0.74
LIMS2-216ENST00000494613 CD209Q9NNX6 404 aa19.66■□□□□ 0.74
LIMS2-216ENST00000494613 TLL2Q9Y6L7 1015 aa19.66■□□□□ 0.74
LIMS2-216ENST00000494613 RARSP54136 660 aaKnown RBP19.65■□□□□ 0.74
LIMS2-216ENST00000494613 GTF2IP78347 998 aa19.65■□□□□ 0.74
LIMS2-216ENST00000494613 RABL6Q3YEC7 729 aaPredicted RBP19.65■□□□□ 0.74
LIMS2-216ENST00000494613 ZNF408Q9H9D4 720 aa19.65■□□□□ 0.74
LIMS2-216ENST00000494613 MYOZ2Q9NPC6 264 aa19.65■□□□□ 0.74
LIMS2-216ENST00000494613 RIPOR2Q9Y4F9 1068 aa19.65■□□□□ 0.74
LIMS2-216ENST00000494613 WDR33Q9C0J8 1336 aaKnown RBP19.65■□□□□ 0.74
LIMS2-216ENST00000494613 IRS2Q9Y4H2 1338 aa19.65■□□□□ 0.74
LIMS2-216ENST00000494613 SAPCD2Q86UD0 394 aa19.64■□□□□ 0.73
LIMS2-216ENST00000494613 ANKRD44Q8N8A2 993 aa19.64■□□□□ 0.73
LIMS2-216ENST00000494613 ASTN2O75129 1339 aaPredicted RBP19.64■□□□□ 0.73
LIMS2-216ENST00000494613 SPEF2Q9C093 1822 aa19.63■□□□□ 0.73
LIMS2-216ENST00000494613 COL13A1Q5TAT6 717 aaPredicted RBP19.63■□□□□ 0.73
LIMS2-216ENST00000494613 OGFOD1Q8N543 542 aa19.63■□□□□ 0.73
LIMS2-216ENST00000494613 CYP4F22Q6NT55 531 aa19.62■□□□□ 0.73
LIMS2-216ENST00000494613 CAPNS2Q96L46 248 aa19.62■□□□□ 0.73
LIMS2-216ENST00000494613 ZNF609O15014 1411 aa19.61■□□□□ 0.73
LIMS2-216ENST00000494613 ADM5C9JUS6 153 aa19.61■□□□□ 0.73
LIMS2-216ENST00000494613 IL1R1P14778 569 aa19.61■□□□□ 0.73
LIMS2-216ENST00000494613 ECE1P42892 770 aa19.61■□□□□ 0.73
LIMS2-216ENST00000494613 UBE4AQ14139 1066 aa19.61■□□□□ 0.73
LIMS2-216ENST00000494613 NBPF9Q3BBW0 867 aa19.61■□□□□ 0.73
LIMS2-216ENST00000494613 IFFO2Q5TF58 517 aa19.61■□□□□ 0.73
LIMS2-216ENST00000494613 ANGEL2Q5VTE6 544 aaKnown RBP19.61■□□□□ 0.73
LIMS2-216ENST00000494613 PAXIP1Q6ZW49 1069 aaPredicted RBP19.61■□□□□ 0.73
LIMS2-216ENST00000494613 ZNF804AQ7Z570 1209 aa19.61■□□□□ 0.73
LIMS2-216ENST00000494613 SULF1Q8IWU6 871 aa19.61■□□□□ 0.73
LIMS2-216ENST00000494613 WBP1LQ9NX94 342 aa19.61■□□□□ 0.73
LIMS2-216ENST00000494613 GGA3Q9NZ52 723 aa19.61■□□□□ 0.73
LIMS2-216ENST00000494613 POLR2AP24928 1970 aaKnown RBP19.61■□□□□ 0.73
LIMS2-216ENST00000494613 MYO3BQ8WXR4 1341 aa19.6■□□□□ 0.73
LIMS2-216ENST00000494613 MMP14P50281 582 aa19.6■□□□□ 0.73
LIMS2-216ENST00000494613 GRM1Q13255 1194 aa19.6■□□□□ 0.73
LIMS2-216ENST00000494613 LRRC24Q50LG9 513 aa19.6■□□□□ 0.73
LIMS2-216ENST00000494613 API5Q9BZZ5 524 aaKnown RBP19.6■□□□□ 0.73
LIMS2-216ENST00000494613 KIAA0825Q8IV33 1275 aa19.59■□□□□ 0.73
LIMS2-216ENST00000494613 KLHDC4Q8TBB5 520 aa19.59■□□□□ 0.73
LIMS2-216ENST00000494613 ARHGAP45Q92619 1136 aa19.59■□□□□ 0.73
LIMS2-216ENST00000494613 HHIPL1Q96JK4 782 aa19.59■□□□□ 0.73
LIMS2-216ENST00000494613 MROH5Q6ZUA9 1318 aa19.58■□□□□ 0.73
LIMS2-216ENST00000494613 WNT10BO00744 389 aa19.58■□□□□ 0.72
LIMS2-216ENST00000494613 FOXN1O15353 648 aa19.58■□□□□ 0.72
LIMS2-216ENST00000494613 SASH1O94885 1247 aa19.58■□□□□ 0.72
LIMS2-216ENST00000494613 C2orf69Q8N8R5 385 aa19.58■□□□□ 0.72
LIMS2-216ENST00000494613 FAM84BQ96KN1 310 aaPredicted RBP19.58■□□□□ 0.72
LIMS2-216ENST00000494613 SCAF8Q9UPN6 1271 aaKnown RBP19.58■□□□□ 0.72
LIMS2-216ENST00000494613 TRPM7Q96QT4 1865 aa19.58■□□□□ 0.72
LIMS2-216ENST00000494613 HIBADHP31937 336 aaKnown RBP19.57■□□□□ 0.72
LIMS2-216ENST00000494613 GYG1P46976 350 aa19.57■□□□□ 0.72
LIMS2-216ENST00000494613 HNRNPUQ00839 825 aaKnown RBP eCLIP19.57■□□□□ 0.72
LIMS2-216ENST00000494613 MAP2K1Q02750 393 aaPredicted RBP19.57■□□□□ 0.72
LIMS2-216ENST00000494613 CERS5Q8N5B7 392 aa19.57■□□□□ 0.72
LIMS2-216ENST00000494613 TDRD7Q8NHU6 1098 aaKnown RBP19.57■□□□□ 0.72
LIMS2-216ENST00000494613 GBA2Q9HCG7 927 aaPredicted RBP19.57■□□□□ 0.72
LIMS2-216ENST00000494613 HDAC9Q9UKV0 1011 aa19.57■□□□□ 0.72
LIMS2-216ENST00000494613 AOC2O75106 756 aa19.56■□□□□ 0.72
LIMS2-216ENST00000494613 UBTFL1P0CB47 393 aaPredicted RBP19.56■□□□□ 0.72
LIMS2-216ENST00000494613 MAP2K2P36507 400 aa19.56■□□□□ 0.72
LIMS2-216ENST00000494613 RFX5P48382 616 aaPredicted RBP19.56■□□□□ 0.72
LIMS2-216ENST00000494613 HUNKP57058 714 aa19.56■□□□□ 0.72
LIMS2-216ENST00000494613 METTL24Q5JXM2 366 aa19.56■□□□□ 0.72
LIMS2-216ENST00000494613 AIDAQ96BJ3 306 aa19.56■□□□□ 0.72
LIMS2-216ENST00000494613 PITPNM2Q9BZ72 1349 aa19.55■□□□□ 0.72
LIMS2-216ENST00000494613 BCAR3O75815 825 aa19.55■□□□□ 0.72
LIMS2-216ENST00000494613 PDE8BO95263 885 aa19.55■□□□□ 0.72
LIMS2-216ENST00000494613 FKBP1AP62942 108 aaKnown RBP19.55■□□□□ 0.72
LIMS2-216ENST00000494613 PRAMEF18Q5VWM3 479 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms