RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, human

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-222	ENST00000494012	VGLL2	Q8N8G2	317 aa		12.4	□□□□□ -0.42
MACF1-222	ENST00000494012	SSH3	Q8TE77	659 aa		12.4	□□□□□ -0.42
MACF1-222	ENST00000494012	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.4	□□□□□ -0.42
MACF1-222	ENST00000494012	ZBTB40	Q9NUA8	1239 aa		12.4	□□□□□ -0.42
MACF1-222	ENST00000494012	GJA3	Q9Y6H8	435 aa		12.4	□□□□□ -0.42
MACF1-222	ENST00000494012	ZNF646	O15015	1829 aa	Predicted RBP	12.39	□□□□□ -0.43
MACF1-222	ENST00000494012	WTIP	A6NIX2	430 aa	Predicted RBP	12.39	□□□□□ -0.43
MACF1-222	ENST00000494012	VEGFA	P15692	232 aa	Predicted RBP	12.39	□□□□□ -0.43
MACF1-222	ENST00000494012	CXCL9	Q07325	125 aa		12.39	□□□□□ -0.43
MACF1-222	ENST00000494012	POLA2	Q14181	598 aa		12.39	□□□□□ -0.43
MACF1-222	ENST00000494012	CEP85	Q6P2H3	762 aa		12.39	□□□□□ -0.43
MACF1-222	ENST00000494012	ATG9A	Q7Z3C6	839 aa		12.39	□□□□□ -0.43
MACF1-222	ENST00000494012	RPAP2	Q8IXW5	612 aa	Predicted RBP	12.39	□□□□□ -0.43
MACF1-222	ENST00000494012	CEP126	Q9P2H0	1117 aa		12.39	□□□□□ -0.43
MACF1-222	ENST00000494012	PA2G4	Q9UQ80	394 aa	Known RBP	12.39	□□□□□ -0.43
MACF1-222	ENST00000494012	IRS2	Q9Y4H2	1338 aa		12.38	□□□□□ -0.43
MACF1-222	ENST00000494012	YDJC	A8MPS7	323 aa		12.38	□□□□□ -0.43
MACF1-222	ENST00000494012	HMMR	O75330	724 aa		12.38	□□□□□ -0.43
MACF1-222	ENST00000494012	RAD17	O75943	681 aa		12.38	□□□□□ -0.43
MACF1-222	ENST00000494012	IFIT1	P09914	478 aa	Known RBP	12.38	□□□□□ -0.43
MACF1-222	ENST00000494012	KLRK1	P26718	216 aa		12.38	□□□□□ -0.43
MACF1-222	ENST00000494012	LMOD1	P29536	600 aa	Predicted RBP	12.38	□□□□□ -0.43
MACF1-222	ENST00000494012	TXNRD3	Q86VQ6	643 aa		12.38	□□□□□ -0.43
MACF1-222	ENST00000494012	C16orf71	Q8IYS4	520 aa	Predicted RBP	12.38	□□□□□ -0.43
MACF1-222	ENST00000494012	NMRK2	Q9NPI5	230 aa		12.38	□□□□□ -0.43
MACF1-222	ENST00000494012	ZNF609	O15014	1411 aa		12.37	□□□□□ -0.43
MACF1-222	ENST00000494012	SLC5A1	P13866	664 aa		12.37	□□□□□ -0.43
MACF1-222	ENST00000494012	G3BP1	Q13283	466 aa	Known RBP eCLIP	12.37	□□□□□ -0.43
MACF1-222	ENST00000494012	OS9	Q13438	667 aa	Predicted RBP	12.37	□□□□□ -0.43
MACF1-222	ENST00000494012	ATP2B3	Q16720	1220 aa		12.37	□□□□□ -0.43
MACF1-222	ENST00000494012	CAVIN4	Q5BKX8	364 aa		12.37	□□□□□ -0.43
MACF1-222	ENST00000494012	LPIN2	Q92539	896 aa		12.37	□□□□□ -0.43
MACF1-222	ENST00000494012	RRAGC	Q9HB90	399 aa		12.37	□□□□□ -0.43
MACF1-222	ENST00000494012	HACL1	Q9UJ83	578 aa		12.37	□□□□□ -0.43
MACF1-222	ENST00000494012	AKAP2	Q9Y2D5	859 aa		12.37	□□□□□ -0.43
MACF1-222	ENST00000494012	USP17L3	A6NCW0	530 aa		12.36	□□□□□ -0.43
MACF1-222	ENST00000494012	USP17L4	A6NCW7	530 aa		12.36	□□□□□ -0.43
MACF1-222	ENST00000494012	SNAP23	O00161	211 aa		12.36	□□□□□ -0.43
MACF1-222	ENST00000494012	SURF6	O75683	361 aa	Known RBP	12.36	□□□□□ -0.43
MACF1-222	ENST00000494012	RPS12	P25398	132 aa	Known RBP	12.36	□□□□□ -0.43
MACF1-222	ENST00000494012	USP17L1	Q7RTZ2	530 aa		12.36	□□□□□ -0.43
MACF1-222	ENST00000494012	VPS37D	Q86XT2	251 aa		12.36	□□□□□ -0.43
MACF1-222	ENST00000494012	MYO3B	Q8WXR4	1341 aa		12.36	□□□□□ -0.43
MACF1-222	ENST00000494012	PSMD14	O00487	310 aa		12.35	□□□□□ -0.43
MACF1-222	ENST00000494012	KIF3C	O14782	793 aa		12.35	□□□□□ -0.43
MACF1-222	ENST00000494012	IL1R1	P14778	569 aa		12.35	□□□□□ -0.43
MACF1-222	ENST00000494012	FGFR2	P21802	821 aa		12.35	□□□□□ -0.43
MACF1-222	ENST00000494012	HIBADH	P31937	336 aa	Known RBP	12.35	□□□□□ -0.43
MACF1-222	ENST00000494012	GMPS	P49915	693 aa	Predicted RBP	12.35	□□□□□ -0.43
MACF1-222	ENST00000494012	SCNN1D	P51172	638 aa		12.35	□□□□□ -0.43
MACF1-222	ENST00000494012	AAMP	Q13685	434 aa		12.35	□□□□□ -0.43
MACF1-222	ENST00000494012	HSP90AB4P	Q58FF6	505 aa		12.35	□□□□□ -0.43
MACF1-222	ENST00000494012	STRIP1	Q5VSL9	837 aa		12.35	□□□□□ -0.43
MACF1-222	ENST00000494012	PNMA8A	Q86V59	439 aa	Predicted RBP	12.35	□□□□□ -0.43
MACF1-222	ENST00000494012	ERC1	Q8IUD2	1116 aa		12.35	□□□□□ -0.43
MACF1-222	ENST00000494012	CD209	Q9NNX6	404 aa		12.35	□□□□□ -0.43
MACF1-222	ENST00000494012	GPRC5D	Q9NZD1	345 aa		12.35	□□□□□ -0.43
MACF1-222	ENST00000494012	NOP58	Q9Y2X3	529 aa	Known RBP	12.35	□□□□□ -0.43
MACF1-222	ENST00000494012	ADAMTSL1	Q8N6G6	1762 aa		12.34	□□□□□ -0.43
MACF1-222	ENST00000494012	VIL1	P09327	827 aa	Known RBP	12.34	□□□□□ -0.43
MACF1-222	ENST00000494012	EPHX2	P34913	555 aa		12.34	□□□□□ -0.43
MACF1-222	ENST00000494012	GYG1	P46976	350 aa		12.34	□□□□□ -0.43
MACF1-222	ENST00000494012	TFCP2	Q12800	502 aa		12.34	□□□□□ -0.43
MACF1-222	ENST00000494012	RSBN1L	Q6PCB5	846 aa	Predicted RBP	12.34	□□□□□ -0.43
MACF1-222	ENST00000494012	AGBL3	Q8NEM8	1001 aa		12.34	□□□□□ -0.43
MACF1-222	ENST00000494012	DPF2	Q92785	391 aa		12.34	□□□□□ -0.43
MACF1-222	ENST00000494012	FBXW7	Q969H0	707 aa		12.34	□□□□□ -0.43
MACF1-222	ENST00000494012	FAM84B	Q96KN1	310 aa	Predicted RBP	12.34	□□□□□ -0.43
MACF1-222	ENST00000494012	KCNQ5	Q9NR82	932 aa		12.34	□□□□□ -0.43
MACF1-222	ENST00000494012	SUPT16H	Q9Y5B9	1047 aa	Known RBP	12.34	□□□□□ -0.43
MACF1-222	ENST00000494012	POTEC	B2RU33	542 aa		12.33	□□□□□ -0.44
MACF1-222	ENST00000494012		H7C1D1	291 aa		12.33	□□□□□ -0.44
MACF1-222	ENST00000494012	FRAT2	O75474	233 aa	Predicted RBP	12.33	□□□□□ -0.44
MACF1-222	ENST00000494012	TOMM70	O94826	608 aa		12.33	□□□□□ -0.44
MACF1-222	ENST00000494012	SASH1	O94885	1247 aa		12.33	□□□□□ -0.44
MACF1-222	ENST00000494012	TTLL5	Q6EMB2	1281 aa		12.33	□□□□□ -0.44
MACF1-222	ENST00000494012	CRBN	Q96SW2	442 aa		12.33	□□□□□ -0.44
MACF1-222	ENST00000494012	TAF1D	Q9H5J8	278 aa	Predicted RBP	12.33	□□□□□ -0.44
MACF1-222	ENST00000494012	ADARB2	Q9NS39	739 aa	Known RBP	12.33	□□□□□ -0.44
MACF1-222	ENST00000494012	GNL3L	Q9NVN8	582 aa	Known RBP	12.33	□□□□□ -0.44
MACF1-222	ENST00000494012		A0A1B0GUL7	405 aa		12.32	□□□□□ -0.44
MACF1-222	ENST00000494012	MMP14	P50281	582 aa		12.32	□□□□□ -0.44
MACF1-222	ENST00000494012	GTF2I	P78347	998 aa		12.32	□□□□□ -0.44
MACF1-222	ENST00000494012	DACT2	Q5SW24	774 aa		12.32	□□□□□ -0.44
MACF1-222	ENST00000494012	FBXO33	Q7Z6M2	555 aa		12.32	□□□□□ -0.44
MACF1-222	ENST00000494012	SIRT2	Q8IXJ6	389 aa		12.32	□□□□□ -0.44
MACF1-222	ENST00000494012	MICALL2	Q8IY33	904 aa		12.32	□□□□□ -0.44
MACF1-222	ENST00000494012	TDRD7	Q8NHU6	1098 aa	Known RBP	12.32	□□□□□ -0.44
MACF1-222	ENST00000494012	RBM46	Q8TBY0	533 aa	Known RBP	12.32	□□□□□ -0.44
MACF1-222	ENST00000494012	GPR108	Q9NPR9	543 aa		12.32	□□□□□ -0.44
MACF1-222	ENST00000494012	CNOT7	Q9UIV1	285 aa	Known RBP	12.32	□□□□□ -0.44
MACF1-222	ENST00000494012	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.32	□□□□□ -0.44
MACF1-222	ENST00000494012	SEMA3E	O15041	775 aa		12.31	□□□□□ -0.44
MACF1-222	ENST00000494012	USP17L8	P0C7I0	530 aa		12.31	□□□□□ -0.44
MACF1-222	ENST00000494012	HSPA6	P17066	643 aa		12.31	□□□□□ -0.44
MACF1-222	ENST00000494012	EPS15	P42566	896 aa		12.31	□□□□□ -0.44
MACF1-222	ENST00000494012	BCAM	P50895	628 aa		12.31	□□□□□ -0.44
MACF1-222	ENST00000494012	FKBP1A	P62942	108 aa	Known RBP	12.31	□□□□□ -0.44
MACF1-222	ENST00000494012	USP50	Q70EL3	339 aa	Predicted RBP	12.31	□□□□□ -0.44
MACF1-222	ENST00000494012	LDHD	Q86WU2	507 aa		12.31	□□□□□ -0.44

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