RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 FAM160A1Q05DH4 1040 aa8.87□□□□□ -0.99
BRCA1-221ENST00000493795 SRGAP1Q7Z6B7 1085 aa8.87□□□□□ -0.99
BRCA1-221ENST00000493795 RAB11FIP4Q86YS3 637 aa8.87□□□□□ -0.99
BRCA1-221ENST00000493795 RBM27Q9P2N5 1060 aaKnown RBP8.87□□□□□ -0.99
BRCA1-221ENST00000493795 MIER3Q7Z3K6 550 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 NEK1Q96PY6 1258 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 CDK19Q9BWU1 502 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 CCDC8Q9H0W5 538 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-221ENST00000493795 PRDM11Q9NQV5 511 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 TMOD3Q9NYL9 352 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 MCM7P33993 719 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 KIFC2Q96AC6 838 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 HAUS8Q9BT25 410 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 GUCA1BQ9UMX6 200 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 A6NNZ2 444 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 TXNDC9O14530 226 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 RHOXF2BP0C7M4 288 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 NFE2L2Q16236 605 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 KLHL40Q2TBA0 621 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 TUBB8Q3ZCM7 444 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 RILPL1Q5EBL4 403 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 RHOXF2Q9BQY4 288 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 ANKFY1Q9P2R3 1169 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 AGTPBP1Q9UPW5 1226 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 PTPRGP23470 1445 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 STK10O94804 968 aaKnown RBP8.86□□□□□ -0.99
BRCA1-221ENST00000493795 INPP1P49441 399 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 ZNF569Q5MCW4 686 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 KRBA2Q6ZNG9 492 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 CCDC186Q7Z3E2 898 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 OGFRQ9NZT2 677 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 HDAC9Q9UKV0 1011 aa8.86□□□□□ -0.99
BRCA1-221ENST00000493795 HCLS1P14317 486 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-221ENST00000493795 DUSP27Q5VZP5 1158 aa8.85□□□□□ -0.99
BRCA1-221ENST00000493795 FAM200AQ8TCP9 573 aa8.85□□□□□ -0.99
BRCA1-221ENST00000493795 MRPS27Q92552 414 aaKnown RBP8.85□□□□□ -0.99
BRCA1-221ENST00000493795 CRNKL1Q9BZJ0 848 aaKnown RBP8.85□□□□□ -0.99
BRCA1-221ENST00000493795 TRMT112Q9UI30 125 aaKnown RBP8.85□□□□□ -0.99
BRCA1-221ENST00000493795 AFG3L2Q9Y4W6 797 aa8.85□□□□□ -0.99
BRCA1-221ENST00000493795 B4DLN1 442 aa8.85□□□□□ -0.99
BRCA1-221ENST00000493795 MRPL12P52815 198 aaKnown RBP8.85□□□□□ -0.99
BRCA1-221ENST00000493795 UBXN1Q04323 297 aa8.85□□□□□ -0.99
BRCA1-221ENST00000493795 GIMAP6Q6P9H5 292 aa8.85□□□□□ -0.99
BRCA1-221ENST00000493795 TAOK1Q7L7X3 1001 aa8.85□□□□□ -0.99
BRCA1-221ENST00000493795 TXNDC2Q86VQ3 553 aa8.85□□□□□ -0.99
BRCA1-221ENST00000493795 AOPEPQ8N6M6 819 aa8.85□□□□□ -0.99
BRCA1-221ENST00000493795 FAM212AQ96EL1 285 aa8.85□□□□□ -0.99
BRCA1-221ENST00000493795 INPP5BP32019 993 aa8.85□□□□□ -0.99
BRCA1-221ENST00000493795 ZBTB17Q13105 803 aa8.85□□□□□ -0.99
BRCA1-221ENST00000493795 NAA16Q6N069 864 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-221ENST00000493795 CROCCP2Q86T23 111 aa8.85□□□□□ -0.99
BRCA1-221ENST00000493795 KRT23Q9C075 422 aa8.85□□□□□ -0.99
BRCA1-221ENST00000493795 C6orf50Q9HD87 102 aa8.85□□□□□ -0.99
BRCA1-221ENST00000493795 I3L4J1 428 aa8.85□□□□□ -0.99
BRCA1-221ENST00000493795 SMIM24O75264 130 aa8.85□□□□□ -0.99
BRCA1-221ENST00000493795 WTAPQ15007 396 aa8.85□□□□□ -0.99
BRCA1-221ENST00000493795 RUFY3Q7L099 469 aa8.85□□□□□ -0.99
BRCA1-221ENST00000493795 GSDMBQ8TAX9 411 aa8.85□□□□□ -0.99
BRCA1-221ENST00000493795 GBP5Q96PP8 586 aa8.85□□□□□ -0.99
BRCA1-221ENST00000493795 ZSCAN22P10073 491 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-221ENST00000493795 ZNF365Q70YC5 407 aa8.85□□□□□ -0.99
BRCA1-221ENST00000493795 MCM10Q7L590 875 aa8.85□□□□□ -0.99
BRCA1-221ENST00000493795 RNF10Q8N5U6 811 aaKnown RBP8.85□□□□□ -0.99
BRCA1-221ENST00000493795 HS2ST1Q7LGA3 356 aa8.84□□□□□ -0.99
BRCA1-221ENST00000493795 ZNF830Q96NB3 372 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-221ENST00000493795 ACTN4O43707 911 aaKnown RBP8.84□□□□□ -0.99
BRCA1-221ENST00000493795 TSPY3P0CV98 308 aa8.84□□□□□ -0.99
BRCA1-221ENST00000493795 TSPY8P0CW00 308 aa8.84□□□□□ -0.99
BRCA1-221ENST00000493795 HPDP32754 393 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-221ENST00000493795 ARHGAP25P42331 645 aa8.84□□□□□ -0.99
BRCA1-221ENST00000493795 IRX4P78413 519 aa8.84□□□□□ -0.99
BRCA1-221ENST00000493795 WHAMMP3Q1A5X7 153 aa8.84□□□□□ -0.99
BRCA1-221ENST00000493795 MAP3K21Q5TCX8 1036 aa8.84□□□□□ -0.99
BRCA1-221ENST00000493795 VSIG1Q86XK7 387 aa8.84□□□□□ -0.99
BRCA1-221ENST00000493795 SMARCC2Q8TAQ2 1214 aa8.84□□□□□ -0.99
BRCA1-221ENST00000493795 LEO1Q8WVC0 666 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-221ENST00000493795 KIFAP3Q92845 792 aa8.84□□□□□ -0.99
BRCA1-221ENST00000493795 SIRT1Q96EB6 747 aa8.84□□□□□ -0.99
BRCA1-221ENST00000493795 RIOK3O14730 519 aaKnown RBP8.84□□□□□ -0.99
BRCA1-221ENST00000493795 GNAQP50148 359 aa8.84□□□□□ -0.99
BRCA1-221ENST00000493795 NBPF8Q3BBV2 869 aa8.84□□□□□ -0.99
BRCA1-221ENST00000493795 ALDH1L2Q3SY69 923 aa8.84□□□□□ -0.99
BRCA1-221ENST00000493795 HEATR3Q7Z4Q2 680 aa8.84□□□□□ -0.99
BRCA1-221ENST00000493795 TMTC2Q8N394 836 aa8.84□□□□□ -0.99
BRCA1-221ENST00000493795 C6orf229H3BNL8 230 aa8.84□□□□□ -0.99
BRCA1-221ENST00000493795 KARSQ15046 597 aaKnown RBP8.84□□□□□ -0.99
BRCA1-221ENST00000493795 CABP1Q9NZU7 370 aa8.84□□□□□ -0.99
BRCA1-221ENST00000493795 NDUFAB1O14561 156 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 HSP90AA4PQ58FG1 418 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 CCDC122Q5T0U0 273 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 HHATQ5VTY9 493 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 LARP6Q9BRS8 491 aaKnown RBP8.83□□□□□ -1
BRCA1-221ENST00000493795 ALG1Q9BT22 464 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 RTEL1-TNFRSF6BF6WH68 1400 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 SLC8A3P57103 927 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 ZC3H6P61129 1189 aaKnown RBP8.83□□□□□ -1
BRCA1-221ENST00000493795 CDC5LQ99459 802 aaKnown RBP8.83□□□□□ -1
BRCA1-221ENST00000493795 TBC1D2Q9BYX2 928 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 LZTFL1Q9NQ48 299 aa8.83□□□□□ -1
BRCA1-221ENST00000493795 UTP11Q9Y3A2 253 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 430.2 ms