RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 TAF7LQ5H9L4 462 aa14.5□□□□□ -0.09
CTSA-209ENST00000493522 CIAPIN1Q6FI81 312 aa14.5□□□□□ -0.09
CTSA-209ENST00000493522 SP8Q8IXZ3 490 aa14.5□□□□□ -0.09
CTSA-209ENST00000493522 MPNDQ8N594 471 aa14.5□□□□□ -0.09
CTSA-209ENST00000493522 MYH13Q9UKX3 1938 aa14.5□□□□□ -0.09
CTSA-209ENST00000493522 TRPM7Q96QT4 1865 aa14.49□□□□□ -0.09
CTSA-209ENST00000493522 CELF2O95319 508 aaKnown RBP14.49□□□□□ -0.09
CTSA-209ENST00000493522 MAP2K2P36507 400 aa14.49□□□□□ -0.09
CTSA-209ENST00000493522 RRP1P56182 461 aaKnown RBP14.49□□□□□ -0.09
CTSA-209ENST00000493522 TNIP1Q15025 636 aa14.49□□□□□ -0.09
CTSA-209ENST00000493522 RABL6Q3YEC7 729 aaPredicted RBP14.49□□□□□ -0.09
CTSA-209ENST00000493522 PSME4Q14997 1843 aa14.49□□□□□ -0.09
CTSA-209ENST00000493522 MVPQ14764 893 aaKnown RBP14.48□□□□□ -0.09
CTSA-209ENST00000493522 SAPCD2Q86UD0 394 aa14.48□□□□□ -0.09
CTSA-209ENST00000493522 ZC3H15Q8WU90 426 aaKnown RBP14.48□□□□□ -0.09
CTSA-209ENST00000493522 HHIPL1Q96JK4 782 aa14.48□□□□□ -0.09
CTSA-209ENST00000493522 MPHOSPH8Q99549 860 aa14.48□□□□□ -0.09
CTSA-209ENST00000493522 COG6Q9Y2V7 657 aa14.48□□□□□ -0.09
CTSA-209ENST00000493522 CA12O43570 354 aa14.47□□□□□ -0.09
CTSA-209ENST00000493522 RAD17O75943 681 aa14.47□□□□□ -0.09
CTSA-209ENST00000493522 GNAI2P04899 355 aa14.47□□□□□ -0.09
CTSA-209ENST00000493522 PDE3AQ14432 1141 aa14.47□□□□□ -0.09
CTSA-209ENST00000493522 C20orf194Q5TEA3 1177 aa14.47□□□□□ -0.09
CTSA-209ENST00000493522 ZNF594Q96JF6 807 aaPredicted RBP14.47□□□□□ -0.09
CTSA-209ENST00000493522 GLIS2Q9BZE0 524 aaPredicted RBP14.47□□□□□ -0.09
CTSA-209ENST00000493522 PGAP2Q9UHJ9 254 aa14.47□□□□□ -0.09
CTSA-209ENST00000493522 DDX19BQ9UMR2 479 aa14.47□□□□□ -0.09
CTSA-209ENST00000493522 ARAP2Q8WZ64 1704 aa14.46□□□□□ -0.09
CTSA-209ENST00000493522 GPSM2P81274 684 aa14.46□□□□□ -0.09
CTSA-209ENST00000493522 CDC37L1Q7L3B6 337 aa14.46□□□□□ -0.09
CTSA-209ENST00000493522 C1orf115Q9H7X2 142 aa14.46□□□□□ -0.09
CTSA-209ENST00000493522 ZNF408Q9H9D4 720 aa14.46□□□□□ -0.09
CTSA-209ENST00000493522 CNNM1Q9NRU3 951 aa14.46□□□□□ -0.09
CTSA-209ENST00000493522 BSDC1Q9NW68 430 aaPredicted RBP14.46□□□□□ -0.09
CTSA-209ENST00000493522 ANKIB1Q9P2G1 1089 aa14.46□□□□□ -0.09
CTSA-209ENST00000493522 NSFL1CQ9UNZ2 370 aaKnown RBP14.46□□□□□ -0.09
CTSA-209ENST00000493522 XDHP47989 1333 aa14.45□□□□□ -0.1
CTSA-209ENST00000493522 H7C1D1 291 aa14.45□□□□□ -0.1
CTSA-209ENST00000493522 AOC2O75106 756 aa14.45□□□□□ -0.1
CTSA-209ENST00000493522 SCN9AQ15858 1988 aa14.44□□□□□ -0.1
CTSA-209ENST00000493522 C6orf229H3BNL8 230 aa14.44□□□□□ -0.1
CTSA-209ENST00000493522 ZBTB7BO15156 539 aaPredicted RBP14.44□□□□□ -0.1
CTSA-209ENST00000493522 UFL1O94874 794 aa14.44□□□□□ -0.1
CTSA-209ENST00000493522 KLHDC4Q8TBB5 520 aa14.44□□□□□ -0.1
CTSA-209ENST00000493522 TRPM4Q8TD43 1214 aa14.44□□□□□ -0.1
CTSA-209ENST00000493522 CNOT7Q9UIV1 285 aaKnown RBP14.44□□□□□ -0.1
CTSA-209ENST00000493522 TSKSQ9UJT2 592 aa14.44□□□□□ -0.1
CTSA-209ENST00000493522 MINPP1Q9UNW1 487 aa14.44□□□□□ -0.1
CTSA-209ENST00000493522 ZNF646O15015 1829 aaPredicted RBP14.43□□□□□ -0.1
CTSA-209ENST00000493522 CCDC85CA6NKD9 419 aa14.43□□□□□ -0.1
CTSA-209ENST00000493522 YDJCA8MPS7 323 aa14.43□□□□□ -0.1
CTSA-209ENST00000493522 SRGAP3O43295 1099 aa14.43□□□□□ -0.1
CTSA-209ENST00000493522 HIRAP54198 1017 aaPredicted RBP14.43□□□□□ -0.1
CTSA-209ENST00000493522 CHRNDQ07001 517 aa14.43□□□□□ -0.1
CTSA-209ENST00000493522 WASHC4Q2M389 1173 aa14.43□□□□□ -0.1
CTSA-209ENST00000493522 LDHAL6AQ6ZMR3 332 aa14.43□□□□□ -0.1
CTSA-209ENST00000493522 MICALL2Q8IY33 904 aa14.43□□□□□ -0.1
CTSA-209ENST00000493522 ANKRD2Q9GZV1 360 aa14.43□□□□□ -0.1
CTSA-209ENST00000493522 CHMP4BQ9H444 224 aaKnown RBP14.43□□□□□ -0.1
CTSA-209ENST00000493522 GGA1Q9UJY5 639 aa14.43□□□□□ -0.1
CTSA-209ENST00000493522 KCNJ4P48050 445 aa14.42□□□□□ -0.1
CTSA-209ENST00000493522 RFX5P48382 616 aaPredicted RBP14.42□□□□□ -0.1
CTSA-209ENST00000493522 NOGQ13253 232 aa14.42□□□□□ -0.1
CTSA-209ENST00000493522 TBC1D16Q8TBP0 767 aa14.42□□□□□ -0.1
CTSA-209ENST00000493522 DPF2Q92785 391 aa14.42□□□□□ -0.1
CTSA-209ENST00000493522 EYA3Q99504 573 aa14.42□□□□□ -0.1
CTSA-209ENST00000493522 PUS3Q9BZE2 481 aaKnown RBP14.42□□□□□ -0.1
CTSA-209ENST00000493522 PODXL2Q9NZ53 605 aa14.42□□□□□ -0.1
CTSA-209ENST00000493522 HUNKP57058 714 aa14.41□□□□□ -0.1
CTSA-209ENST00000493522 MTX1Q13505 466 aa14.41□□□□□ -0.1
CTSA-209ENST00000493522 HELBQ8NG08 1087 aaPredicted RBP14.41□□□□□ -0.1
CTSA-209ENST00000493522 SIL1Q9H173 461 aa14.41□□□□□ -0.1
CTSA-209ENST00000493522 POLLQ9UGP5 575 aa14.41□□□□□ -0.1
CTSA-209ENST00000493522 MED23Q9ULK4 1368 aa14.4□□□□□ -0.1
CTSA-209ENST00000493522 SHTN1A0MZ66 631 aa14.4□□□□□ -0.1
CTSA-209ENST00000493522 PSMD14O00487 310 aa14.4□□□□□ -0.1
CTSA-209ENST00000493522 RIMBP2O15034 1052 aa14.4□□□□□ -0.1
CTSA-209ENST00000493522 TAF5LO75529 589 aa14.4□□□□□ -0.1
CTSA-209ENST00000493522 ATP2B4P23634 1241 aa14.4□□□□□ -0.1
CTSA-209ENST00000493522 RPS12P25398 132 aaKnown RBP14.4□□□□□ -0.1
CTSA-209ENST00000493522 MLLT1Q03111 559 aaPredicted RBP14.4□□□□□ -0.1
CTSA-209ENST00000493522 PTPN12Q05209 780 aaKnown RBP14.4□□□□□ -0.1
CTSA-209ENST00000493522 LRRC24Q50LG9 513 aa14.4□□□□□ -0.1
CTSA-209ENST00000493522 USP48Q86UV5 1035 aa14.4□□□□□ -0.1
CTSA-209ENST00000493522 DBNDD1Q9H9R9 158 aa14.4□□□□□ -0.1
CTSA-209ENST00000493522 PA2G4Q9UQ80 394 aaKnown RBP14.4□□□□□ -0.1
CTSA-209ENST00000493522 ZBTB12Q9Y330 459 aaPredicted RBP14.4□□□□□ -0.1
CTSA-209ENST00000493522 MROH5Q6ZUA9 1318 aa14.4□□□□□ -0.1
CTSA-209ENST00000493522 PNMA6EA0A0J9YXQ4 647 aa14.39□□□□□ -0.11
CTSA-209ENST00000493522 EYA2O00167 538 aa14.39□□□□□ -0.11
CTSA-209ENST00000493522 METTL24Q5JXM2 366 aa14.39□□□□□ -0.11
CTSA-209ENST00000493522 SAMD7Q7Z3H4 446 aa14.39□□□□□ -0.11
CTSA-209ENST00000493522 KRT26Q7Z3Y9 468 aa14.39□□□□□ -0.11
CTSA-209ENST00000493522 CRBNQ96SW2 442 aa14.39□□□□□ -0.11
CTSA-209ENST00000493522 SUPT16HQ9Y5B9 1047 aaKnown RBP14.39□□□□□ -0.11
CTSA-209ENST00000493522 ZNF804BA4D1E1 1349 aa14.39□□□□□ -0.11
CTSA-209ENST00000493522 G3V3G9 751 aa14.38□□□□□ -0.11
CTSA-209ENST00000493522 ECE2O60344 883 aa14.38□□□□□ -0.11
CTSA-209ENST00000493522 RGS19P49795 217 aa14.38□□□□□ -0.11
CTSA-209ENST00000493522 TBC1D10BQ4KMP7 808 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 242.6 ms