RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 CIAO1O76071 339 aa15.9■□□□□ 0.14
CLIP2-209ENST00000493166 LMOD1P29536 600 aaPredicted RBP15.9■□□□□ 0.14
CLIP2-209ENST00000493166 UBE4AQ14139 1066 aa15.9■□□□□ 0.14
CLIP2-209ENST00000493166 PODNQ7Z5L7 613 aa15.9■□□□□ 0.14
CLIP2-209ENST00000493166 COA1Q9GZY4 146 aa15.9■□□□□ 0.14
CLIP2-209ENST00000493166 CHMP4BQ9H444 224 aaKnown RBP15.9■□□□□ 0.14
CLIP2-209ENST00000493166 COPRSQ9NQ92 184 aa15.9■□□□□ 0.14
CLIP2-209ENST00000493166 PNMA6EA0A0J9YXQ4 647 aa15.89■□□□□ 0.13
CLIP2-209ENST00000493166 PSMD14O00487 310 aa15.89■□□□□ 0.13
CLIP2-209ENST00000493166 PDE8BO95263 885 aa15.89■□□□□ 0.13
CLIP2-209ENST00000493166 RRP1P56182 461 aaKnown RBP15.89■□□□□ 0.13
CLIP2-209ENST00000493166 C15orf52Q6ZUT6 534 aaKnown RBP15.89■□□□□ 0.13
CLIP2-209ENST00000493166 ATG9AQ7Z3C6 839 aa15.89■□□□□ 0.13
CLIP2-209ENST00000493166 ZNF804AQ7Z570 1209 aa15.89■□□□□ 0.13
CLIP2-209ENST00000493166 VGLL2Q8N8G2 317 aa15.89■□□□□ 0.13
CLIP2-209ENST00000493166 KCNQ5Q9NR82 932 aa15.89■□□□□ 0.13
CLIP2-209ENST00000493166 HACL1Q9UJ83 578 aa15.89■□□□□ 0.13
CLIP2-209ENST00000493166 IRS2Q9Y4H2 1338 aa15.89■□□□□ 0.13
CLIP2-209ENST00000493166 ADAMTSL1Q8N6G6 1762 aa15.88■□□□□ 0.13
CLIP2-209ENST00000493166 IL15P40933 162 aaPredicted RBP15.88■□□□□ 0.13
CLIP2-209ENST00000493166 GMPSP49915 693 aaPredicted RBP15.88■□□□□ 0.13
CLIP2-209ENST00000493166 SCNN1DP51172 638 aa15.88■□□□□ 0.13
CLIP2-209ENST00000493166 PUM3Q15397 648 aaKnown RBP15.88■□□□□ 0.13
CLIP2-209ENST00000493166 TAF1DQ9H5J8 278 aaPredicted RBP15.88■□□□□ 0.13
CLIP2-209ENST00000493166 USP17L3A6NCW0 530 aa15.87■□□□□ 0.13
CLIP2-209ENST00000493166 USP17L4A6NCW7 530 aa15.87■□□□□ 0.13
CLIP2-209ENST00000493166 TOMM70O94826 608 aa15.87■□□□□ 0.13
CLIP2-209ENST00000493166 EPHX2P34913 555 aa15.87■□□□□ 0.13
CLIP2-209ENST00000493166 ATP8B2P98198 1209 aa15.87■□□□□ 0.13
CLIP2-209ENST00000493166 USP17L1Q7RTZ2 530 aa15.87■□□□□ 0.13
CLIP2-209ENST00000493166 FBXW7Q969H0 707 aa15.87■□□□□ 0.13
CLIP2-209ENST00000493166 CD209Q9NNX6 404 aa15.87■□□□□ 0.13
CLIP2-209ENST00000493166 GPRC5DQ9NZD1 345 aa15.87■□□□□ 0.13
CLIP2-209ENST00000493166 CEP126Q9P2H0 1117 aa15.87■□□□□ 0.13
CLIP2-209ENST00000493166 ZBTB12Q9Y330 459 aaPredicted RBP15.87■□□□□ 0.13
CLIP2-209ENST00000493166 RPS12P25398 132 aaKnown RBP15.86■□□□□ 0.13
CLIP2-209ENST00000493166 POLA2Q14181 598 aa15.86■□□□□ 0.13
CLIP2-209ENST00000493166 CEP85Q6P2H3 762 aa15.86■□□□□ 0.13
CLIP2-209ENST00000493166 RBM46Q8TBY0 533 aaKnown RBP15.86■□□□□ 0.13
CLIP2-209ENST00000493166 SSH3Q8TE77 659 aa15.86■□□□□ 0.13
CLIP2-209ENST00000493166 ZBTB40Q9NUA8 1239 aa15.86■□□□□ 0.13
CLIP2-209ENST00000493166 VIL1P09327 827 aaKnown RBP15.85■□□□□ 0.13
CLIP2-209ENST00000493166 IFIT1P09914 478 aaKnown RBP15.85■□□□□ 0.13
CLIP2-209ENST00000493166 SLC5A1P13866 664 aa15.85■□□□□ 0.13
CLIP2-209ENST00000493166 EPS15P42566 896 aa15.85■□□□□ 0.13
CLIP2-209ENST00000493166 GYG1P46976 350 aa15.85■□□□□ 0.13
CLIP2-209ENST00000493166 EAPPQ56P03 285 aaPredicted RBP15.85■□□□□ 0.13
CLIP2-209ENST00000493166 RSBN1LQ6PCB5 846 aaPredicted RBP15.85■□□□□ 0.13
CLIP2-209ENST00000493166 VPS37DQ86XT2 251 aa15.85■□□□□ 0.13
CLIP2-209ENST00000493166 ZNF609O15014 1411 aa15.85■□□□□ 0.13
CLIP2-209ENST00000493166 POLR2AP24928 1970 aaKnown RBP15.84■□□□□ 0.13
CLIP2-209ENST00000493166 IL1R1P14778 569 aa15.84■□□□□ 0.13
CLIP2-209ENST00000493166 FGFR2P21802 821 aa15.84■□□□□ 0.13
CLIP2-209ENST00000493166 HIBADHP31937 336 aaKnown RBP15.84■□□□□ 0.13
CLIP2-209ENST00000493166 G3BP1Q13283 466 aaKnown RBP eCLIP15.84■□□□□ 0.135e-6■■■■□ 22.5
CLIP2-209ENST00000493166 ATP2B3Q16720 1220 aa15.84■□□□□ 0.13
CLIP2-209ENST00000493166 CAVIN4Q5BKX8 364 aa15.84■□□□□ 0.13
CLIP2-209ENST00000493166 TTLL5Q6EMB2 1281 aa15.84■□□□□ 0.13
CLIP2-209ENST00000493166 PNMA8AQ86V59 439 aaPredicted RBP15.84■□□□□ 0.13
CLIP2-209ENST00000493166 LPIN2Q92539 896 aa15.84■□□□□ 0.13
CLIP2-209ENST00000493166 DPF2Q92785 391 aa15.84■□□□□ 0.13
CLIP2-209ENST00000493166 ADARB2Q9NS39 739 aaKnown RBP15.84■□□□□ 0.13
CLIP2-209ENST00000493166 CNOT7Q9UIV1 285 aaKnown RBP15.84■□□□□ 0.13
CLIP2-209ENST00000493166 ECM29Q5VYK3 1845 aa15.83■□□□□ 0.12
CLIP2-209ENST00000493166 H7C1D1 291 aa15.83■□□□□ 0.12
CLIP2-209ENST00000493166 GTF2IP78347 998 aa15.83■□□□□ 0.12
CLIP2-209ENST00000493166 OS9Q13438 667 aaPredicted RBP15.83■□□□□ 0.12
CLIP2-209ENST00000493166 DACT2Q5SW24 774 aa15.83■□□□□ 0.12
CLIP2-209ENST00000493166 STRIP1Q5VSL9 837 aa15.83■□□□□ 0.12
CLIP2-209ENST00000493166 MICALL2Q8IY33 904 aa15.83■□□□□ 0.12
CLIP2-209ENST00000493166 SMC1BQ8NDV3 1235 aa15.83■□□□□ 0.12
CLIP2-209ENST00000493166 FAM84BQ96KN1 310 aaPredicted RBP15.83■□□□□ 0.12
CLIP2-209ENST00000493166 SURF6O75683 361 aaKnown RBP15.82■□□□□ 0.12
CLIP2-209ENST00000493166 POTEIP0CG38 1075 aa15.82■□□□□ 0.12
CLIP2-209ENST00000493166 POTEJP0CG39 1038 aa15.82■□□□□ 0.12
CLIP2-209ENST00000493166 TFCP2Q12800 502 aa15.82■□□□□ 0.12
CLIP2-209ENST00000493166 USP50Q70EL3 339 aaPredicted RBP15.82■□□□□ 0.12
CLIP2-209ENST00000493166 LDHDQ86WU2 507 aa15.82■□□□□ 0.12
CLIP2-209ENST00000493166 RPAP2Q8IXW5 612 aaPredicted RBP15.82■□□□□ 0.12
CLIP2-209ENST00000493166 AGBL3Q8NEM8 1001 aa15.82■□□□□ 0.12
CLIP2-209ENST00000493166 CLEC11AQ9Y240 323 aa15.82■□□□□ 0.12
CLIP2-209ENST00000493166 AKAP2Q9Y2D5 859 aa15.82■□□□□ 0.12
CLIP2-209ENST00000493166 MYO3BQ8WXR4 1341 aa15.82■□□□□ 0.12
CLIP2-209ENST00000493166 SHTN1A0MZ66 631 aa15.81■□□□□ 0.12
CLIP2-209ENST00000493166 HMMRO75330 724 aa15.81■□□□□ 0.12
CLIP2-209ENST00000493166 FRAT2O75474 233 aaPredicted RBP15.81■□□□□ 0.12
CLIP2-209ENST00000493166 FSTL1Q12841 308 aa15.81■□□□□ 0.12
CLIP2-209ENST00000493166 FBXO33Q7Z6M2 555 aa15.81■□□□□ 0.12
CLIP2-209ENST00000493166 TDRD7Q8NHU6 1098 aaKnown RBP15.81■□□□□ 0.12
CLIP2-209ENST00000493166 TRPM7Q96QT4 1865 aa15.81■□□□□ 0.12
CLIP2-209ENST00000493166 MXD3Q9BW11 206 aa15.81■□□□□ 0.12
CLIP2-209ENST00000493166 SASH1O94885 1247 aa15.8■□□□□ 0.12
CLIP2-209ENST00000493166 BCAMP50895 628 aa15.8■□□□□ 0.12
CLIP2-209ENST00000493166 CHADLQ6NUI6 762 aa15.8■□□□□ 0.12
CLIP2-209ENST00000493166 GMLQ99445 158 aa15.8■□□□□ 0.12
CLIP2-209ENST00000493166 IQSEC3Q9UPP2 1182 aaPredicted RBP15.8■□□□□ 0.12
CLIP2-209ENST00000493166 JAG2Q9Y219 1238 aa15.8■□□□□ 0.12
CLIP2-209ENST00000493166 NOP58Q9Y2X3 529 aaKnown RBP15.8■□□□□ 0.12
CLIP2-209ENST00000493166 CEP350Q5VT06 3117 aa15.79■□□□□ 0.12
CLIP2-209ENST00000493166 A0A1B0GUL7 405 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms