RNA–Protein interactions for RNA: ENST00000492418.1

TMC1-205, Transcript of transmembrane channel like 1, humanhuman

TSL 3

Gene TMC1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-205ENST00000492418 USP17L3A6NCW0 530 aa13.86□□□□□ -0.19
TMC1-205ENST00000492418 USP17L4A6NCW7 530 aa13.86□□□□□ -0.19
TMC1-205ENST00000492418 WTIPA6NIX2 430 aaPredicted RBP13.86□□□□□ -0.19
TMC1-205ENST00000492418 YDJCA8MPS7 323 aa13.86□□□□□ -0.19
TMC1-205ENST00000492418 FRAT2O75474 233 aaPredicted RBP13.86□□□□□ -0.19
TMC1-205ENST00000492418 ATP8B2P98198 1209 aa13.86□□□□□ -0.19
TMC1-205ENST00000492418 PUM3Q15397 648 aaKnown RBP13.86□□□□□ -0.19
TMC1-205ENST00000492418 USP17L1Q7RTZ2 530 aa13.86□□□□□ -0.19
TMC1-205ENST00000492418 CLEC11AQ9Y240 323 aa13.86□□□□□ -0.19
TMC1-205ENST00000492418 DUOX1Q9NRD9 1551 aa13.86□□□□□ -0.19
TMC1-205ENST00000492418 PSMD14O00487 310 aa13.85□□□□□ -0.19
TMC1-205ENST00000492418 KIF3CO14782 793 aa13.85□□□□□ -0.19
TMC1-205ENST00000492418 HMMRO75330 724 aa13.85□□□□□ -0.19
TMC1-205ENST00000492418 SLC5A1P13866 664 aa13.85□□□□□ -0.19
TMC1-205ENST00000492418 RPS12P25398 132 aaKnown RBP13.85□□□□□ -0.19
TMC1-205ENST00000492418 HIBADHP31937 336 aaKnown RBP13.85□□□□□ -0.19
TMC1-205ENST00000492418 EPHX2P34913 555 aa13.85□□□□□ -0.19
TMC1-205ENST00000492418 GMPSP49915 693 aaPredicted RBP13.85□□□□□ -0.19
TMC1-205ENST00000492418 RRP1P56182 461 aaKnown RBP13.85□□□□□ -0.19
TMC1-205ENST00000492418 EAPPQ56P03 285 aaPredicted RBP13.85□□□□□ -0.19
TMC1-205ENST00000492418 C15orf52Q6ZUT6 534 aaKnown RBP13.85□□□□□ -0.19
TMC1-205ENST00000492418 PA2G4Q9UQ80 394 aaKnown RBP13.85□□□□□ -0.19
TMC1-205ENST00000492418 AKAP2Q9Y2D5 859 aa13.85□□□□□ -0.19
TMC1-205ENST00000492418 SNAP23O00161 211 aa13.84□□□□□ -0.19
TMC1-205ENST00000492418 SURF6O75683 361 aaKnown RBP13.84□□□□□ -0.19
TMC1-205ENST00000492418 TTLL5Q6EMB2 1281 aa13.84□□□□□ -0.19
TMC1-205ENST00000492418 TXNRD3Q86VQ6 643 aa13.84□□□□□ -0.19
TMC1-205ENST00000492418 LPIN2Q92539 896 aa13.84□□□□□ -0.19
TMC1-205ENST00000492418 TAF1DQ9H5J8 278 aaPredicted RBP13.84□□□□□ -0.19
TMC1-205ENST00000492418 CD209Q9NNX6 404 aa13.84□□□□□ -0.19
TMC1-205ENST00000492418 GPRC5DQ9NZD1 345 aa13.84□□□□□ -0.19
TMC1-205ENST00000492418 COL4A5P29400 1685 aa13.84□□□□□ -0.19
TMC1-205ENST00000492418 LTBP1Q14766 1721 aa13.84□□□□□ -0.19
TMC1-205ENST00000492418 PNMA6EA0A0J9YXQ4 647 aa13.83□□□□□ -0.2
TMC1-205ENST00000492418 VIL1P09327 827 aaKnown RBP13.83□□□□□ -0.2
TMC1-205ENST00000492418 KLRK1P26718 216 aa13.83□□□□□ -0.2
TMC1-205ENST00000492418 C20orf194Q5TEA3 1177 aa13.83□□□□□ -0.2
TMC1-205ENST00000492418 STRIP1Q5VSL9 837 aa13.83□□□□□ -0.2
TMC1-205ENST00000492418 ATG9AQ7Z3C6 839 aa13.83□□□□□ -0.2
TMC1-205ENST00000492418 RPAP2Q8IXW5 612 aaPredicted RBP13.83□□□□□ -0.2
TMC1-205ENST00000492418 OGFOD1Q8N543 542 aa13.83□□□□□ -0.2
TMC1-205ENST00000492418 SMC1BQ8NDV3 1235 aa13.83□□□□□ -0.2
TMC1-205ENST00000492418 RBM46Q8TBY0 533 aaKnown RBP13.83□□□□□ -0.2
TMC1-205ENST00000492418 DPF2Q92785 391 aa13.83□□□□□ -0.2
TMC1-205ENST00000492418 KCNQ5Q9NR82 932 aa13.83□□□□□ -0.2
TMC1-205ENST00000492418 ZBTB40Q9NUA8 1239 aa13.83□□□□□ -0.2
TMC1-205ENST00000492418 GNL3LQ9NVN8 582 aaKnown RBP13.83□□□□□ -0.2
TMC1-205ENST00000492418 CNOT7Q9UIV1 285 aaKnown RBP13.83□□□□□ -0.2
TMC1-205ENST00000492418 WDR90Q96KV7 1748 aa13.82□□□□□ -0.2
TMC1-205ENST00000492418 POTECB2RU33 542 aa13.82□□□□□ -0.2
TMC1-205ENST00000492418 EPS15P42566 896 aa13.82□□□□□ -0.2
TMC1-205ENST00000492418 GYG1P46976 350 aa13.82□□□□□ -0.2
TMC1-205ENST00000492418 SCNN1DP51172 638 aa13.82□□□□□ -0.2
TMC1-205ENST00000492418 C1QTNF8P60827 252 aa13.82□□□□□ -0.2
TMC1-205ENST00000492418 GTF2IP78347 998 aa13.82□□□□□ -0.2
TMC1-205ENST00000492418 ATP2B3Q16720 1220 aa13.82□□□□□ -0.2
TMC1-205ENST00000492418 HSP90AB4PQ58FF6 505 aa13.82□□□□□ -0.2
TMC1-205ENST00000492418 GORABQ5T7V8 394 aa13.82□□□□□ -0.2
TMC1-205ENST00000492418 RSBN1LQ6PCB5 846 aaPredicted RBP13.82□□□□□ -0.2
TMC1-205ENST00000492418 USP50Q70EL3 339 aaPredicted RBP13.82□□□□□ -0.2
TMC1-205ENST00000492418 AGBL3Q8NEM8 1001 aa13.82□□□□□ -0.2
TMC1-205ENST00000492418 SSH3Q8TE77 659 aa13.82□□□□□ -0.2
TMC1-205ENST00000492418 ADARB2Q9NS39 739 aaKnown RBP13.82□□□□□ -0.2
TMC1-205ENST00000492418 ZBTB12Q9Y330 459 aaPredicted RBP13.82□□□□□ -0.2
TMC1-205ENST00000492418 MYO3BQ8WXR4 1341 aa13.82□□□□□ -0.2
TMC1-205ENST00000492418 SCN4AP35499 1836 aa13.81□□□□□ -0.2
TMC1-205ENST00000492418 FSTL1Q12841 308 aa13.81□□□□□ -0.2
TMC1-205ENST00000492418 POLA2Q14181 598 aa13.81□□□□□ -0.2
TMC1-205ENST00000492418 CEP85Q6P2H3 762 aa13.81□□□□□ -0.2
TMC1-205ENST00000492418 LDHDQ86WU2 507 aa13.81□□□□□ -0.2
TMC1-205ENST00000492418 MICALL2Q8IY33 904 aa13.81□□□□□ -0.2
TMC1-205ENST00000492418 VGLL2Q8N8G2 317 aa13.81□□□□□ -0.2
TMC1-205ENST00000492418 FAM84BQ96KN1 310 aaPredicted RBP13.81□□□□□ -0.2
TMC1-205ENST00000492418 NEUROD6Q96NK8 337 aa13.81□□□□□ -0.2
TMC1-205ENST00000492418 HDAC9Q9UKV0 1011 aa13.81□□□□□ -0.2
TMC1-205ENST00000492418 SASH1O94885 1247 aa13.8□□□□□ -0.2
TMC1-205ENST00000492418 USP17L8P0C7I0 530 aa13.8□□□□□ -0.2
TMC1-205ENST00000492418 IL1R1P14778 569 aa13.8□□□□□ -0.2
TMC1-205ENST00000492418 MMP14P50281 582 aa13.8□□□□□ -0.2
TMC1-205ENST00000492418 TFCP2Q12800 502 aa13.8□□□□□ -0.2
TMC1-205ENST00000492418 RBM26Q5T8P6 1007 aaKnown RBP13.8□□□□□ -0.2
TMC1-205ENST00000492418 CHADLQ6NUI6 762 aa13.8□□□□□ -0.2
TMC1-205ENST00000492418 ERC1Q8IUD2 1116 aa13.8□□□□□ -0.2
TMC1-205ENST00000492418 BCAMP50895 628 aa13.79□□□□□ -0.2
TMC1-205ENST00000492418 DACT2Q5SW24 774 aa13.79□□□□□ -0.2
TMC1-205ENST00000492418 FBXO33Q7Z6M2 555 aa13.79□□□□□ -0.2
TMC1-205ENST00000492418 FGFR2P21802 821 aa13.78□□□□□ -0.2
TMC1-205ENST00000492418 TIMM10P62072 90 aa13.78□□□□□ -0.2
TMC1-205ENST00000492418 CHAF1AQ13111 956 aaPredicted RBP13.78□□□□□ -0.2
TMC1-205ENST00000492418 TDRD7Q8NHU6 1098 aaKnown RBP13.78□□□□□ -0.2
TMC1-205ENST00000492418 IQSEC3Q9UPP2 1182 aaPredicted RBP13.78□□□□□ -0.2
TMC1-205ENST00000492418 A0A1B0GUL7 405 aa13.77□□□□□ -0.21
TMC1-205ENST00000492418 TBC1D10BQ4KMP7 808 aaPredicted RBP13.77□□□□□ -0.21
TMC1-205ENST00000492418 KIAA0825Q8IV33 1275 aa13.77□□□□□ -0.21
TMC1-205ENST00000492418 TBC1D22AQ8WUA7 517 aa13.77□□□□□ -0.21
TMC1-205ENST00000492418 NOP58Q9Y2X3 529 aaKnown RBP13.77□□□□□ -0.21
TMC1-205ENST00000492418 IRS2Q9Y4H2 1338 aa13.77□□□□□ -0.21
TMC1-205ENST00000492418 SUPT16HQ9Y5B9 1047 aaKnown RBP13.77□□□□□ -0.21
TMC1-205ENST00000492418 FKBP1AP62942 108 aaKnown RBP13.76□□□□□ -0.21
TMC1-205ENST00000492418 MFSD14BQ5SR56 506 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms