RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 DACT2Q5SW24 774 aa10.88□□□□□ -0.67
APOBEC3F-204ENST00000491387 RASAL3Q86YV0 1011 aa10.88□□□□□ -0.67
APOBEC3F-204ENST00000491387 PLA2G12BQ9BX93 195 aa10.88□□□□□ -0.67
APOBEC3F-204ENST00000491387 MAP3K2Q9Y2U5 619 aa10.88□□□□□ -0.67
APOBEC3F-204ENST00000491387 MYO3BQ8WXR4 1341 aa10.87□□□□□ -0.67
APOBEC3F-204ENST00000491387 PI4KAP2A4QPH2 592 aa10.87□□□□□ -0.67
APOBEC3F-204ENST00000491387 H7C1W4 665 aa10.87□□□□□ -0.67
APOBEC3F-204ENST00000491387 TRPA1O75762 1119 aa10.87□□□□□ -0.67
APOBEC3F-204ENST00000491387 NOM1Q5C9Z4 860 aaKnown RBP10.87□□□□□ -0.67
APOBEC3F-204ENST00000491387 STRIP1Q5VSL9 837 aa10.87□□□□□ -0.67
APOBEC3F-204ENST00000491387 TSPYL6Q8N831 410 aa10.87□□□□□ -0.67
APOBEC3F-204ENST00000491387 PI4KAP1Q8N8J0 262 aa10.87□□□□□ -0.67
APOBEC3F-204ENST00000491387 COA1Q9GZY4 146 aa10.87□□□□□ -0.67
APOBEC3F-204ENST00000491387 LEMD3Q9Y2U8 911 aa10.87□□□□□ -0.67
APOBEC3F-204ENST00000491387 TNRC18O15417 2968 aaPredicted RBP10.87□□□□□ -0.67
APOBEC3F-204ENST00000491387 NEURL1BA8MQ27 555 aa10.86□□□□□ -0.67
APOBEC3F-204ENST00000491387 CCT4P50991 539 aaKnown RBP10.86□□□□□ -0.67
APOBEC3F-204ENST00000491387 NEXNQ0ZGT2 675 aa10.86□□□□□ -0.67
APOBEC3F-204ENST00000491387 CTU1Q7Z7A3 348 aaKnown RBP10.86□□□□□ -0.67
APOBEC3F-204ENST00000491387 JARID2Q92833 1246 aaPredicted RBP10.86□□□□□ -0.67
APOBEC3F-204ENST00000491387 CCDC85AQ96PX6 553 aaPredicted RBP10.86□□□□□ -0.67
APOBEC3F-204ENST00000491387 GREM2Q9H772 168 aa10.86□□□□□ -0.67
APOBEC3F-204ENST00000491387 WTIPA6NIX2 430 aaPredicted RBP10.85□□□□□ -0.67
APOBEC3F-204ENST00000491387 WNT10BO00744 389 aa10.85□□□□□ -0.67
APOBEC3F-204ENST00000491387 CSF1RP07333 972 aa10.85□□□□□ -0.67
APOBEC3F-204ENST00000491387 TM4SF4P48230 202 aa10.85□□□□□ -0.67
APOBEC3F-204ENST00000491387 PKN2Q16513 984 aaKnown RBP10.85□□□□□ -0.67
APOBEC3F-204ENST00000491387 NBPF9Q3BBW0 867 aa10.85□□□□□ -0.67
APOBEC3F-204ENST00000491387 OGFOD1Q8N543 542 aa10.85□□□□□ -0.67
APOBEC3F-204ENST00000491387 ZBED3Q96IU2 234 aaPredicted RBP10.85□□□□□ -0.67
APOBEC3F-204ENST00000491387 CFHR5Q9BXR6 569 aa10.85□□□□□ -0.67
APOBEC3F-204ENST00000491387 IL16Q14005 1332 aa10.84□□□□□ -0.67
APOBEC3F-204ENST00000491387 ZNF316A6NFI3 1004 aaPredicted RBP10.84□□□□□ -0.67
APOBEC3F-204ENST00000491387 CASP7P55210 303 aa10.84□□□□□ -0.67
APOBEC3F-204ENST00000491387 C15orf52Q6ZUT6 534 aaKnown RBP10.84□□□□□ -0.67
APOBEC3F-204ENST00000491387 TXNRD3Q86VQ6 643 aa10.84□□□□□ -0.67
APOBEC3F-204ENST00000491387 STK31Q9BXU1 1019 aa10.84□□□□□ -0.67
APOBEC3F-204ENST00000491387 ANKRD2Q9GZV1 360 aa10.84□□□□□ -0.67
APOBEC3F-204ENST00000491387 IGHMBP2P38935 993 aaKnown RBP10.83□□□□□ -0.68
APOBEC3F-204ENST00000491387 GCKRQ14397 625 aa10.83□□□□□ -0.68
APOBEC3F-204ENST00000491387 CWF19L2Q2TBE0 894 aaKnown RBP10.83□□□□□ -0.68
APOBEC3F-204ENST00000491387 LDLRAD1Q5T700 205 aa10.83□□□□□ -0.68
APOBEC3F-204ENST00000491387 MOB2Q70IA6 237 aa10.83□□□□□ -0.68
APOBEC3F-204ENST00000491387 TSR2Q969E8 191 aaKnown RBP10.83□□□□□ -0.68
APOBEC3F-204ENST00000491387 ZNF804BA4D1E1 1349 aa10.83□□□□□ -0.68
APOBEC3F-204ENST00000491387 IRS2Q9Y4H2 1338 aa10.83□□□□□ -0.68
APOBEC3F-204ENST00000491387 COL1A1P02452 1464 aaPredicted RBP10.82□□□□□ -0.68
APOBEC3F-204ENST00000491387 UNCXA6NJT0 531 aa10.82□□□□□ -0.68
APOBEC3F-204ENST00000491387 UBE2Q2LH0YL09 131 aa10.82□□□□□ -0.68
APOBEC3F-204ENST00000491387 SLC4A2P04920 1241 aa10.82□□□□□ -0.68
APOBEC3F-204ENST00000491387 NF2P35240 595 aa10.82□□□□□ -0.68
APOBEC3F-204ENST00000491387 TWISTNBQ3B726 338 aaPredicted RBP10.82□□□□□ -0.68
APOBEC3F-204ENST00000491387 TTLL5Q6EMB2 1281 aa10.82□□□□□ -0.68
APOBEC3F-204ENST00000491387 G2E3Q7L622 706 aa10.82□□□□□ -0.68
APOBEC3F-204ENST00000491387 UBE3BQ7Z3V4 1068 aa10.82□□□□□ -0.68
APOBEC3F-204ENST00000491387 WWC1Q8IX03 1113 aa10.82□□□□□ -0.68
APOBEC3F-204ENST00000491387 MTMR14Q8NCE2 650 aa10.82□□□□□ -0.68
APOBEC3F-204ENST00000491387 LINS1Q8NG48 757 aa10.82□□□□□ -0.68
APOBEC3F-204ENST00000491387 SALL2Q9Y467 1007 aaPredicted RBP10.82□□□□□ -0.68
APOBEC3F-204ENST00000491387 ITGA6P23229 1130 aa10.81□□□□□ -0.68
APOBEC3F-204ENST00000491387 FLIIQ13045 1269 aa10.81□□□□□ -0.68
APOBEC3F-204ENST00000491387 MAP3K11Q16584 847 aa10.81□□□□□ -0.68
APOBEC3F-204ENST00000491387 PRAMEF18Q5VWM3 479 aa10.81□□□□□ -0.68
APOBEC3F-204ENST00000491387 APOBEC3FQ8IUX4 373 aaKnown RBP10.81□□□□□ -0.68
APOBEC3F-204ENST00000491387 ZNF296Q8WUU4 475 aaPredicted RBP10.81□□□□□ -0.68
APOBEC3F-204ENST00000491387 MXD3Q9BW11 206 aa10.81□□□□□ -0.68
APOBEC3F-204ENST00000491387 PCDH10Q9P2E7 1040 aa10.81□□□□□ -0.68
APOBEC3F-204ENST00000491387 HPS5Q9UPZ3 1129 aa10.81□□□□□ -0.68
APOBEC3F-204ENST00000491387 GPR25O00155 361 aa10.8□□□□□ -0.68
APOBEC3F-204ENST00000491387 KLRK1P26718 216 aa10.8□□□□□ -0.68
APOBEC3F-204ENST00000491387 FKBP1AP62942 108 aaKnown RBP10.8□□□□□ -0.68
APOBEC3F-204ENST00000491387 SREBF2Q12772 1141 aa10.8□□□□□ -0.68
APOBEC3F-204ENST00000491387 ARMC9Q7Z3E5 817 aa10.8□□□□□ -0.68
APOBEC3F-204ENST00000491387 DNAAF4Q8WXU2 420 aa10.8□□□□□ -0.68
APOBEC3F-204ENST00000491387 MPHOSPH8Q99549 860 aa10.8□□□□□ -0.68
APOBEC3F-204ENST00000491387 MYH16Q9H6N6 1097 aa10.8□□□□□ -0.68
APOBEC3F-204ENST00000491387 CD209Q9NNX6 404 aa10.8□□□□□ -0.68
APOBEC3F-204ENST00000491387 HDAC9Q9UKV0 1011 aa10.8□□□□□ -0.68
APOBEC3F-204ENST00000491387 SCAF8Q9UPN6 1271 aaKnown RBP10.8□□□□□ -0.68
APOBEC3F-204ENST00000491387 PPP2R3BQ9Y5P8 575 aa10.8□□□□□ -0.68
APOBEC3F-204ENST00000491387 TBC1D8O95759 1140 aa10.79□□□□□ -0.68
APOBEC3F-204ENST00000491387 ALDH1A1P00352 501 aa10.79□□□□□ -0.68
APOBEC3F-204ENST00000491387 IL1R1P14778 569 aa10.79□□□□□ -0.68
APOBEC3F-204ENST00000491387 ZEB1P37275 1124 aaPredicted RBP10.79□□□□□ -0.68
APOBEC3F-204ENST00000491387 SOX10P56693 466 aa10.79□□□□□ -0.68
APOBEC3F-204ENST00000491387 INHBEP58166 350 aa10.79□□□□□ -0.68
APOBEC3F-204ENST00000491387 GTF2IP78347 998 aa10.79□□□□□ -0.68
APOBEC3F-204ENST00000491387 PTPN12Q05209 780 aaKnown RBP10.79□□□□□ -0.68
APOBEC3F-204ENST00000491387 CHRNDQ07001 517 aa10.79□□□□□ -0.68
APOBEC3F-204ENST00000491387 SPRYD7Q5W111 196 aa10.79□□□□□ -0.68
APOBEC3F-204ENST00000491387 MRS2Q9HD23 443 aa10.79□□□□□ -0.68
APOBEC3F-204ENST00000491387 LAMB1P07942 1786 aa10.79□□□□□ -0.68
APOBEC3F-204ENST00000491387 ANKRD18BA2A2Z9 1011 aa10.78□□□□□ -0.68
APOBEC3F-204ENST00000491387 VAMP4O75379 141 aa10.78□□□□□ -0.68
APOBEC3F-204ENST00000491387 SASH1O94885 1247 aa10.78□□□□□ -0.68
APOBEC3F-204ENST00000491387 ZBTB48P10074 688 aaPredicted RBP10.78□□□□□ -0.68
APOBEC3F-204ENST00000491387 FOXO4P98177 505 aa10.78□□□□□ -0.68
APOBEC3F-204ENST00000491387 TTLL12Q14166 644 aaPredicted RBP10.78□□□□□ -0.68
APOBEC3F-204ENST00000491387 FBXO46Q6PJ61 603 aaPredicted RBP10.78□□□□□ -0.68
APOBEC3F-204ENST00000491387 KIAA0825Q8IV33 1275 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms