RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 SASH1O94885 1247 aa24.43■■□□□ 1.5
SHROOM3-209ENST00000490690 FGFR2P21802 821 aa24.43■■□□□ 1.5
SHROOM3-209ENST00000490690 PODNQ7Z5L7 613 aa24.43■■□□□ 1.5
SHROOM3-209ENST00000490690 GNL3LQ9NVN8 582 aaKnown RBP24.43■■□□□ 1.5
SHROOM3-209ENST00000490690 RNF181Q9P0P0 153 aa24.43■■□□□ 1.5
SHROOM3-209ENST00000490690 AOC3Q16853 763 aa24.42■■□□□ 1.5
SHROOM3-209ENST00000490690 A0A1B0GUL7 405 aa24.41■■□□□ 1.5
SHROOM3-209ENST00000490690 TNNI3KQ59H18 835 aa24.41■■□□□ 1.5
SHROOM3-209ENST00000490690 C9orf131Q5VYM1 1079 aa24.41■■□□□ 1.5
SHROOM3-209ENST00000490690 FPGT-TNNI3KV9GXZ4 949 aa24.41■■□□□ 1.5
SHROOM3-209ENST00000490690 RIMBP2O15034 1052 aa24.4■■□□□ 1.5
SHROOM3-209ENST00000490690 HIBADHP31937 336 aaKnown RBP24.4■■□□□ 1.5
SHROOM3-209ENST00000490690 EIF6P56537 245 aaKnown RBP24.4■■□□□ 1.5
SHROOM3-209ENST00000490690 GORABQ5T7V8 394 aa24.4■■□□□ 1.5
SHROOM3-209ENST00000490690 ZNRF3Q9ULT6 936 aa24.4■■□□□ 1.5
SHROOM3-209ENST00000490690 ZBTB22O15209 634 aa24.39■■□□□ 1.49
SHROOM3-209ENST00000490690 NEUROD6Q96NK8 337 aa24.39■■□□□ 1.49
SHROOM3-209ENST00000490690 ZNF609O15014 1411 aa24.38■■□□□ 1.49
SHROOM3-209ENST00000490690 CCDC158Q5M9N0 1113 aa24.38■■□□□ 1.49
SHROOM3-209ENST00000490690 SMC5Q8IY18 1101 aa24.38■■□□□ 1.49
SHROOM3-209ENST00000490690 GOLGB1Q14789 3259 aaKnown RBP24.38■■□□□ 1.49
SHROOM3-209ENST00000490690 SEMA3EO15041 775 aa24.37■■□□□ 1.49
SHROOM3-209ENST00000490690 IFIT2P09913 472 aaKnown RBP24.37■■□□□ 1.49
SHROOM3-209ENST00000490690 SLC51AQ86UW1 340 aa24.37■■□□□ 1.49
SHROOM3-209ENST00000490690 APBB1O00213 710 aa24.36■■□□□ 1.49
SHROOM3-209ENST00000490690 ECE2O60344 883 aa24.36■■□□□ 1.49
SHROOM3-209ENST00000490690 TNIP1Q15025 636 aa24.36■■□□□ 1.49
SHROOM3-209ENST00000490690 DPY19L2Q6NUT2 758 aa24.36■■□□□ 1.49
SHROOM3-209ENST00000490690 FBXO33Q7Z6M2 555 aa24.36■■□□□ 1.49
SHROOM3-209ENST00000490690 AACSQ86V21 672 aa24.36■■□□□ 1.49
SHROOM3-209ENST00000490690 XAGE2Q96GT9 111 aa24.36■■□□□ 1.49
SHROOM3-209ENST00000490690 GPATCH3Q96I76 525 aa24.36■■□□□ 1.49
SHROOM3-209ENST00000490690 IRS2Q9Y4H2 1338 aa24.35■■□□□ 1.49
SHROOM3-209ENST00000490690 A0A1B0GUL6 1792 aa24.35■■□□□ 1.49
SHROOM3-209ENST00000490690 FZD9O00144 591 aa24.35■■□□□ 1.49
SHROOM3-209ENST00000490690 FRAT2O75474 233 aaPredicted RBP24.35■■□□□ 1.49
SHROOM3-209ENST00000490690 UQCRFS1P1P0C7P4 283 aa24.35■■□□□ 1.49
SHROOM3-209ENST00000490690 IL1R1P14778 569 aa24.35■■□□□ 1.49
SHROOM3-209ENST00000490690 CCDC136Q96JN2 1154 aa24.35■■□□□ 1.49
SHROOM3-209ENST00000490690 FAM84BQ96KN1 310 aaPredicted RBP24.35■■□□□ 1.49
SHROOM3-209ENST00000490690 CD209Q9NNX6 404 aa24.35■■□□□ 1.49
SHROOM3-209ENST00000490690 TIMM10P62072 90 aa24.34■■□□□ 1.49
SHROOM3-209ENST00000490690 DBNDD1Q9H9R9 158 aa24.34■■□□□ 1.49
SHROOM3-209ENST00000490690 IL1RAPL2Q9NP60 686 aa24.34■■□□□ 1.49
SHROOM3-209ENST00000490690 SNAP23O00161 211 aa24.33■■□□□ 1.49
SHROOM3-209ENST00000490690 ANKRD45Q5TZF3 282 aa24.33■■□□□ 1.49
SHROOM3-209ENST00000490690 CENPQQ7L2Z9 268 aaPredicted RBP24.33■■□□□ 1.49
SHROOM3-209ENST00000490690 GPR101Q96P66 508 aaPredicted RBP24.33■■□□□ 1.49
SHROOM3-209ENST00000490690 PPP4R2Q9NY27 417 aa24.33■■□□□ 1.49
SHROOM3-209ENST00000490690 IGHDP01880 384 aa24.32■■□□□ 1.48
SHROOM3-209ENST00000490690 GYG1P46976 350 aa24.32■■□□□ 1.48
SHROOM3-209ENST00000490690 DOK7Q18PE1 504 aa24.32■■□□□ 1.48
SHROOM3-209ENST00000490690 TXNRD3Q86VQ6 643 aa24.32■■□□□ 1.48
SHROOM3-209ENST00000490690 EAF2Q96CJ1 260 aaPredicted RBP24.32■■□□□ 1.48
SHROOM3-209ENST00000490690 ZNF512BQ96KM6 892 aaPredicted RBP24.32■■□□□ 1.48
SHROOM3-209ENST00000490690 DENND2AQ9ULE3 1009 aa24.32■■□□□ 1.48
SHROOM3-209ENST00000490690 MYO3BQ8WXR4 1341 aa24.32■■□□□ 1.48
SHROOM3-209ENST00000490690 USP17L3A6NCW0 530 aa24.31■■□□□ 1.48
SHROOM3-209ENST00000490690 USP17L4A6NCW7 530 aa24.31■■□□□ 1.48
SHROOM3-209ENST00000490690 KLRK1P26718 216 aa24.31■■□□□ 1.48
SHROOM3-209ENST00000490690 MMP14P50281 582 aa24.31■■□□□ 1.48
SHROOM3-209ENST00000490690 PRELPP51888 382 aa24.31■■□□□ 1.48
SHROOM3-209ENST00000490690 TTC39AQ5SRH9 613 aa24.31■■□□□ 1.48
SHROOM3-209ENST00000490690 STRIP1Q5VSL9 837 aa24.31■■□□□ 1.48
SHROOM3-209ENST00000490690 CCDC102BQ68D86 513 aa24.31■■□□□ 1.48
SHROOM3-209ENST00000490690 CIAPIN1Q6FI81 312 aa24.31■■□□□ 1.48
SHROOM3-209ENST00000490690 USP17L1Q7RTZ2 530 aa24.31■■□□□ 1.48
SHROOM3-209ENST00000490690 TDRD7Q8NHU6 1098 aaKnown RBP24.31■■□□□ 1.48
SHROOM3-209ENST00000490690 TBC1D22AQ8WUA7 517 aa24.31■■□□□ 1.48
SHROOM3-209ENST00000490690 PDS5AQ29RF7 1337 aaKnown RBP24.31■■□□□ 1.48
SHROOM3-209ENST00000490690 BCAMP50895 628 aa24.3■■□□□ 1.48
SHROOM3-209ENST00000490690 GPC2Q8N158 579 aa24.3■■□□□ 1.48
SHROOM3-209ENST00000490690 DICER1Q9UPY3 1922 aaKnown RBP24.29■■□□□ 1.48
SHROOM3-209ENST00000490690 WTIPA6NIX2 430 aaPredicted RBP24.29■■□□□ 1.48
SHROOM3-209ENST00000490690 IGSF3O75054 1194 aa24.29■■□□□ 1.48
SHROOM3-209ENST00000490690 RPS12P25398 132 aaKnown RBP24.29■■□□□ 1.48
SHROOM3-209ENST00000490690 FKBP1AP62942 108 aaKnown RBP24.29■■□□□ 1.48
SHROOM3-209ENST00000490690 ZGPATQ8N5A5 531 aaKnown RBP24.29■■□□□ 1.48
SHROOM3-209ENST00000490690 DBNLQ9UJU6 430 aaKnown RBP24.29■■□□□ 1.48
SHROOM3-209ENST00000490690 SBF1O95248 1867 aa24.29■■□□□ 1.48
SHROOM3-209ENST00000490690 ARAP2Q8WZ64 1704 aa24.28■■□□□ 1.48
SHROOM3-209ENST00000490690 ARID4AP29374 1257 aaPredicted RBP24.28■■□□□ 1.48
SHROOM3-209ENST00000490690 NUCB1Q02818 461 aa24.28■■□□□ 1.48
SHROOM3-209ENST00000490690 CHD1LQ86WJ1 897 aa24.28■■□□□ 1.48
SHROOM3-209ENST00000490690 WDR66Q8TBY9 1149 aa24.28■■□□□ 1.48
SHROOM3-209ENST00000490690 DBNDD2Q9BQY9 259 aa24.28■■□□□ 1.48
SHROOM3-209ENST00000490690 CCDC8Q9H0W5 538 aaPredicted RBP24.28■■□□□ 1.48
SHROOM3-209ENST00000490690 KDM2BQ8NHM5 1336 aa24.28■■□□□ 1.48
SHROOM3-209ENST00000490690 ADORA1P30542 326 aa24.27■■□□□ 1.48
SHROOM3-209ENST00000490690 TTLL5Q6EMB2 1281 aa24.27■■□□□ 1.48
SHROOM3-209ENST00000490690 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.27■■□□□ 1.48
SHROOM3-209ENST00000490690 FAM205AQ6ZU69 1335 aa24.27■■□□□ 1.48
SHROOM3-209ENST00000490690 CHD4Q14839 1912 aa24.26■■□□□ 1.47
SHROOM3-209ENST00000490690 ERC2O15083 957 aa24.26■■□□□ 1.47
SHROOM3-209ENST00000490690 PHKA1P46020 1223 aa24.26■■□□□ 1.47
SHROOM3-209ENST00000490690 CXCL9Q07325 125 aa24.26■■□□□ 1.47
SHROOM3-209ENST00000490690 AGBL3Q8NEM8 1001 aa24.26■■□□□ 1.47
SHROOM3-209ENST00000490690 SUGT1Q9Y2Z0 365 aa24.26■■□□□ 1.47
SHROOM3-209ENST00000490690 TTC41PQ6P2S7 1318 aa24.26■■□□□ 1.47
SHROOM3-209ENST00000490690 UTRNP46939 3433 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms