RNA–Protein interactions for RNA: ENST00000489907.2

SMG5-205, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG5, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-205ENST00000489907 USP17L8P0C7I0 530 aa10.53□□□□□ -0.72
SMG5-205ENST00000489907 ATP2B4P23634 1241 aa10.53□□□□□ -0.72
SMG5-205ENST00000489907 NBPF9Q3BBW0 867 aa10.53□□□□□ -0.72
SMG5-205ENST00000489907 DACT2Q5SW24 774 aa10.53□□□□□ -0.72
SMG5-205ENST00000489907 DIEXFQ68CQ4 756 aaKnown RBP10.53□□□□□ -0.72
SMG5-205ENST00000489907 KSR2Q6VAB6 950 aa10.53□□□□□ -0.72
SMG5-205ENST00000489907 G2E3Q7L622 706 aa10.53□□□□□ -0.72
SMG5-205ENST00000489907 USP17L1Q7RTZ2 530 aa10.53□□□□□ -0.72
SMG5-205ENST00000489907 ANKRD18AQ8IVF6 992 aa10.53□□□□□ -0.72
SMG5-205ENST00000489907 PI4KAP1Q8N8J0 262 aa10.53□□□□□ -0.72
SMG5-205ENST00000489907 MXD3Q9BW11 206 aa10.53□□□□□ -0.72
SMG5-205ENST00000489907 GREM2Q9H772 168 aa10.53□□□□□ -0.72
SMG5-205ENST00000489907 BSDC1Q9NW68 430 aaPredicted RBP10.53□□□□□ -0.72
SMG5-205ENST00000489907 MAP3K2Q9Y2U5 619 aa10.53□□□□□ -0.72
SMG5-205ENST00000489907 MED23Q9ULK4 1368 aa10.52□□□□□ -0.72
SMG5-205ENST00000489907 HSP90B1P14625 803 aaKnown RBP10.52□□□□□ -0.73
SMG5-205ENST00000489907 CASP7P55210 303 aa10.52□□□□□ -0.73
SMG5-205ENST00000489907 CTSWP56202 376 aa10.52□□□□□ -0.73
SMG5-205ENST00000489907 FKBP1BP68106 108 aa10.52□□□□□ -0.73
SMG5-205ENST00000489907 CCDC184Q52MB2 194 aa10.52□□□□□ -0.73
SMG5-205ENST00000489907 CCDC30Q5VVM6 783 aa10.52□□□□□ -0.73
SMG5-205ENST00000489907 PRAMEF18Q5VWM3 479 aa10.52□□□□□ -0.73
SMG5-205ENST00000489907 IRS2Q9Y4H2 1338 aa10.52□□□□□ -0.73
SMG5-205ENST00000489907 NEURL1BA8MQ27 555 aa10.51□□□□□ -0.73
SMG5-205ENST00000489907 UBE2Q2LH0YL09 131 aa10.51□□□□□ -0.73
SMG5-205ENST00000489907 WNT10BO00744 389 aa10.51□□□□□ -0.73
SMG5-205ENST00000489907 CSF1RP07333 972 aa10.51□□□□□ -0.73
SMG5-205ENST00000489907 TM4SF4P48230 202 aa10.51□□□□□ -0.73
SMG5-205ENST00000489907 CCT4P50991 539 aaKnown RBP10.51□□□□□ -0.73
SMG5-205ENST00000489907 CWF19L2Q2TBE0 894 aaKnown RBP10.51□□□□□ -0.73
SMG5-205ENST00000489907 REM2Q8IYK8 340 aaPredicted RBP10.51□□□□□ -0.73
SMG5-205ENST00000489907 ZBED3Q96IU2 234 aaPredicted RBP10.51□□□□□ -0.73
SMG5-205ENST00000489907 CACNA1FO60840 1977 aa10.51□□□□□ -0.73
SMG5-205ENST00000489907 ECM29Q5VYK3 1845 aa10.5□□□□□ -0.73
SMG5-205ENST00000489907 KLRK1P26718 216 aa10.5□□□□□ -0.73
SMG5-205ENST00000489907 STRIP1Q5VSL9 837 aa10.5□□□□□ -0.73
SMG5-205ENST00000489907 TSR2Q969E8 191 aaKnown RBP10.5□□□□□ -0.73
SMG5-205ENST00000489907 PLA2G12BQ9BX93 195 aa10.5□□□□□ -0.73
SMG5-205ENST00000489907 G3V3G9 751 aa10.49□□□□□ -0.73
SMG5-205ENST00000489907 DDX58O95786 925 aaKnown RBP10.49□□□□□ -0.73
SMG5-205ENST00000489907 CALD1Q05682 793 aaKnown RBP10.49□□□□□ -0.73
SMG5-205ENST00000489907 CCDC27Q2M243 656 aa10.49□□□□□ -0.73
SMG5-205ENST00000489907 DCAF8Q5TAQ9 597 aa10.49□□□□□ -0.73
SMG5-205ENST00000489907 CTU1Q7Z7A3 348 aaKnown RBP10.49□□□□□ -0.73
SMG5-205ENST00000489907 CDC5LQ99459 802 aaKnown RBP10.49□□□□□ -0.73
SMG5-205ENST00000489907 COA1Q9GZY4 146 aa10.49□□□□□ -0.73
SMG5-205ENST00000489907 R3HDMLQ9H3Y0 253 aa10.49□□□□□ -0.73
SMG5-205ENST00000489907 LEMD3Q9Y2U8 911 aa10.49□□□□□ -0.73
SMG5-205ENST00000489907 TBC1D8O95759 1140 aa10.48□□□□□ -0.73
SMG5-205ENST00000489907 GCKRQ14397 625 aa10.48□□□□□ -0.73
SMG5-205ENST00000489907 NOM1Q5C9Z4 860 aaKnown RBP10.48□□□□□ -0.73
SMG5-205ENST00000489907 LDLRAD1Q5T700 205 aa10.48□□□□□ -0.73
SMG5-205ENST00000489907 WWC1Q8IX03 1113 aa10.48□□□□□ -0.73
SMG5-205ENST00000489907 ZNF296Q8WUU4 475 aaPredicted RBP10.48□□□□□ -0.73
SMG5-205ENST00000489907 CFHR5Q9BXR6 569 aa10.48□□□□□ -0.73
SMG5-205ENST00000489907 SNAP23O00161 211 aa10.47□□□□□ -0.73
SMG5-205ENST00000489907 SASH1O94885 1247 aa10.47□□□□□ -0.73
SMG5-205ENST00000489907 SLC4A2P04920 1241 aa10.47□□□□□ -0.73
SMG5-205ENST00000489907 ITGA6P23229 1130 aa10.47□□□□□ -0.73
SMG5-205ENST00000489907 MMP14P50281 582 aa10.47□□□□□ -0.73
SMG5-205ENST00000489907 SOX10P56693 466 aa10.47□□□□□ -0.73
SMG5-205ENST00000489907 PTPN12Q05209 780 aaKnown RBP10.47□□□□□ -0.73
SMG5-205ENST00000489907 TTLL5Q6EMB2 1281 aa10.47□□□□□ -0.73
SMG5-205ENST00000489907 UBE3BQ7Z3V4 1068 aa10.47□□□□□ -0.73
SMG5-205ENST00000489907 CERS5Q8N5B7 392 aa10.47□□□□□ -0.73
SMG5-205ENST00000489907 HPS5Q9UPZ3 1129 aa10.47□□□□□ -0.73
SMG5-205ENST00000489907 ZNF804BA4D1E1 1349 aa10.47□□□□□ -0.73
SMG5-205ENST00000489907 MYO3BQ8WXR4 1341 aa10.47□□□□□ -0.73
SMG5-205ENST00000489907 FOXO4P98177 505 aa10.46□□□□□ -0.73
SMG5-205ENST00000489907 TWISTNBQ3B726 338 aaPredicted RBP10.46□□□□□ -0.73
SMG5-205ENST00000489907 C15orf52Q6ZUT6 534 aaKnown RBP10.46□□□□□ -0.73
SMG5-205ENST00000489907 MIER1Q8N108 512 aa10.46□□□□□ -0.73
SMG5-205ENST00000489907 MTMR14Q8NCE2 650 aa10.46□□□□□ -0.73
SMG5-205ENST00000489907 CHMP4AQ9BY43 222 aa10.46□□□□□ -0.73
SMG5-205ENST00000489907 FZD1Q9UP38 647 aa10.46□□□□□ -0.73
SMG5-205ENST00000489907 PCDHAC2Q9Y5I4 1007 aa10.46□□□□□ -0.73
SMG5-205ENST00000489907 SSC5DA1L4H1 1573 aa10.46□□□□□ -0.74
SMG5-205ENST00000489907 AOX1Q06278 1338 aa10.45□□□□□ -0.74
SMG5-205ENST00000489907 GPR25O00155 361 aa10.45□□□□□ -0.74
SMG5-205ENST00000489907 VAMP4O75379 141 aa10.45□□□□□ -0.74
SMG5-205ENST00000489907 GTF2IP78347 998 aa10.45□□□□□ -0.74
SMG5-205ENST00000489907 CHRNDQ07001 517 aa10.45□□□□□ -0.74
SMG5-205ENST00000489907 NEXNQ0ZGT2 675 aa10.45□□□□□ -0.74
SMG5-205ENST00000489907 FLIIQ13045 1269 aa10.45□□□□□ -0.74
SMG5-205ENST00000489907 PKN2Q16513 984 aaKnown RBP10.45□□□□□ -0.74
SMG5-205ENST00000489907 MAP3K11Q16584 847 aa10.45□□□□□ -0.74
SMG5-205ENST00000489907 KIAA0825Q8IV33 1275 aa10.45□□□□□ -0.74
SMG5-205ENST00000489907 OGFOD1Q8N543 542 aa10.45□□□□□ -0.74
SMG5-205ENST00000489907 CD209Q9NNX6 404 aa10.45□□□□□ -0.74
SMG5-205ENST00000489907 PDE4DIPQ5VU43 2346 aa10.44□□□□□ -0.74
SMG5-205ENST00000489907 IL16Q14005 1332 aa10.44□□□□□ -0.74
SMG5-205ENST00000489907 SPRYD7Q5W111 196 aa10.44□□□□□ -0.74
SMG5-205ENST00000489907 LINS1Q8NG48 757 aa10.44□□□□□ -0.74
SMG5-205ENST00000489907 ANKRD2Q9GZV1 360 aa10.44□□□□□ -0.74
SMG5-205ENST00000489907 HTTP42858 3142 aa10.43□□□□□ -0.74
SMG5-205ENST00000489907 TAF5LO75529 589 aa10.43□□□□□ -0.74
SMG5-205ENST00000489907 IL1R1P14778 569 aa10.43□□□□□ -0.74
SMG5-205ENST00000489907 IGHMBP2P38935 993 aaKnown RBP10.43□□□□□ -0.74
SMG5-205ENST00000489907 MKRN3Q13064 507 aaKnown RBP10.43□□□□□ -0.74
SMG5-205ENST00000489907 PRKG1Q13976 671 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms