RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 TIMM10P62072 90 aa17.03■□□□□ 0.32
C9orf3-221ENST00000489562 OLFM4Q6UX06 510 aa17.03■□□□□ 0.32
C9orf3-221ENST00000489562 VPS33BQ9H267 617 aa17.03■□□□□ 0.32
C9orf3-221ENST00000489562 POLLQ9UGP5 575 aa17.03■□□□□ 0.32
C9orf3-221ENST00000489562 LTBP3Q9NS15 1303 aa17.02■□□□□ 0.32
C9orf3-221ENST00000489562 FKBP4Q02790 459 aaKnown RBP eCLIP17.02■□□□□ 0.32
C9orf3-221ENST00000489562 CAVIN4Q5BKX8 364 aa17.02■□□□□ 0.32
C9orf3-221ENST00000489562 GORABQ5T7V8 394 aa17.02■□□□□ 0.32
C9orf3-221ENST00000489562 SLC51AQ86UW1 340 aa17.02■□□□□ 0.32
C9orf3-221ENST00000489562 XAGE2Q96GT9 111 aa17.02■□□□□ 0.32
C9orf3-221ENST00000489562 CCDC8Q9H0W5 538 aaPredicted RBP17.02■□□□□ 0.32
C9orf3-221ENST00000489562 DBNLQ9UJU6 430 aaKnown RBP17.02■□□□□ 0.32
C9orf3-221ENST00000489562 WWC3Q9ULE0 1092 aa17.02■□□□□ 0.32
C9orf3-221ENST00000489562 DICER1Q9UPY3 1922 aaKnown RBP17.02■□□□□ 0.31
C9orf3-221ENST00000489562 TTC41PQ6P2S7 1318 aa17.01■□□□□ 0.31
C9orf3-221ENST00000489562 MX1P20591 662 aa17.01■□□□□ 0.31
C9orf3-221ENST00000489562 CCDC158Q5M9N0 1113 aa17.01■□□□□ 0.31
C9orf3-221ENST00000489562 DBNDD2Q9BQY9 259 aa17.01■□□□□ 0.31
C9orf3-221ENST00000489562 ZC3H12CQ9C0D7 883 aaKnown RBP17.01■□□□□ 0.31
C9orf3-221ENST00000489562 TAOK3Q9H2K8 898 aa17.01■□□□□ 0.31
C9orf3-221ENST00000489562 SBF1O95248 1867 aa17.01■□□□□ 0.31
C9orf3-221ENST00000489562 AOX1Q06278 1338 aa17■□□□□ 0.31
C9orf3-221ENST00000489562 SALL3Q9BXA9 1300 aa17■□□□□ 0.31
C9orf3-221ENST00000489562 IRS2Q9Y4H2 1338 aa17■□□□□ 0.31
C9orf3-221ENST00000489562 SNAP23O00161 211 aa17■□□□□ 0.31
C9orf3-221ENST00000489562 WASHC4Q2M389 1173 aa17■□□□□ 0.31
C9orf3-221ENST00000489562 ZNF804AQ7Z570 1209 aa17■□□□□ 0.31
C9orf3-221ENST00000489562 BCL11AQ9H165 835 aa17■□□□□ 0.31
C9orf3-221ENST00000489562 GNL3LQ9NVN8 582 aaKnown RBP17■□□□□ 0.31
C9orf3-221ENST00000489562 AKAP11Q9UKA4 1901 aa17■□□□□ 0.31
C9orf3-221ENST00000489562 ZBTB22O15209 634 aa16.99■□□□□ 0.31
C9orf3-221ENST00000489562 UQCRFS1P1P0C7P4 283 aa16.99■□□□□ 0.31
C9orf3-221ENST00000489562 ADORA1P30542 326 aa16.99■□□□□ 0.31
C9orf3-221ENST00000489562 VPS37DQ86XT2 251 aa16.99■□□□□ 0.31
C9orf3-221ENST00000489562 C16orf71Q8IYS4 520 aaPredicted RBP16.99■□□□□ 0.31
C9orf3-221ENST00000489562 ZNF512BQ96KM6 892 aaPredicted RBP16.99■□□□□ 0.31
C9orf3-221ENST00000489562 ECHDC1Q9NTX5 307 aa16.99■□□□□ 0.31
C9orf3-221ENST00000489562 TLR7Q9NYK1 1049 aaKnown RBP16.99■□□□□ 0.31
C9orf3-221ENST00000489562 STAP2Q9UGK3 403 aa16.99■□□□□ 0.31
C9orf3-221ENST00000489562 AK9Q5TCS8 1911 aa16.99■□□□□ 0.31
C9orf3-221ENST00000489562 PSME4Q14997 1843 aa16.98■□□□□ 0.31
C9orf3-221ENST00000489562 ERC2O15083 957 aa16.98■□□□□ 0.31
C9orf3-221ENST00000489562 PDE4AP27815 886 aa16.98■□□□□ 0.31
C9orf3-221ENST00000489562 HIBADHP31937 336 aaKnown RBP16.98■□□□□ 0.31
C9orf3-221ENST00000489562 PDE1AP54750 535 aa16.98■□□□□ 0.31
C9orf3-221ENST00000489562 KIAA2012Q0VF49 1180 aa16.98■□□□□ 0.31
C9orf3-221ENST00000489562 CCDC102BQ68D86 513 aa16.98■□□□□ 0.31
C9orf3-221ENST00000489562 FBXO33Q7Z6M2 555 aa16.98■□□□□ 0.31
C9orf3-221ENST00000489562 PLEKHM2Q8IWE5 1019 aa16.98■□□□□ 0.31
C9orf3-221ENST00000489562 OSBPL3Q9H4L5 887 aa16.98■□□□□ 0.31
C9orf3-221ENST00000489562 WTIPA6NIX2 430 aaPredicted RBP16.97■□□□□ 0.31
C9orf3-221ENST00000489562 NFKBIEO00221 500 aa16.97■□□□□ 0.31
C9orf3-221ENST00000489562 SEMA3EO15041 775 aa16.97■□□□□ 0.31
C9orf3-221ENST00000489562 ARID4AP29374 1257 aaPredicted RBP16.97■□□□□ 0.31
C9orf3-221ENST00000489562 GYG1P46976 350 aa16.97■□□□□ 0.31
C9orf3-221ENST00000489562 TTC39AQ5SRH9 613 aa16.97■□□□□ 0.31
C9orf3-221ENST00000489562 PELP1Q8IZL8 1130 aaKnown RBP16.97■□□□□ 0.31
C9orf3-221ENST00000489562 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.97■□□□□ 0.31
C9orf3-221ENST00000489562 FAM84BQ96KN1 310 aaPredicted RBP16.97■□□□□ 0.31
C9orf3-221ENST00000489562 COA1Q9GZY4 146 aa16.97■□□□□ 0.31
C9orf3-221ENST00000489562 G3V3G9 751 aa16.96■□□□□ 0.31
C9orf3-221ENST00000489562 PPIP5K2O43314 1243 aa16.96■□□□□ 0.31
C9orf3-221ENST00000489562 GRIN3BO60391 1043 aa16.96■□□□□ 0.31
C9orf3-221ENST00000489562 GLRX3O76003 335 aaKnown RBP16.96■□□□□ 0.31
C9orf3-221ENST00000489562 YBX3P16989 372 aaKnown RBP eCLIP16.96■□□□□ 0.31
C9orf3-221ENST00000489562 ATP5JP18859 108 aa16.96■□□□□ 0.31
C9orf3-221ENST00000489562 KLRK1P26718 216 aa16.96■□□□□ 0.31
C9orf3-221ENST00000489562 IARSP41252 1262 aaKnown RBP16.96■□□□□ 0.31
C9orf3-221ENST00000489562 PHKA1P46020 1223 aa16.96■□□□□ 0.31
C9orf3-221ENST00000489562 GPR162Q16538 588 aa16.96■□□□□ 0.31
C9orf3-221ENST00000489562 DCAF8Q5TAQ9 597 aa16.96■□□□□ 0.31
C9orf3-221ENST00000489562 TXNRD3Q86VQ6 643 aa16.96■□□□□ 0.31
C9orf3-221ENST00000489562 OTUD7AQ8TE49 926 aaPredicted RBP16.96■□□□□ 0.31
C9orf3-221ENST00000489562 RIMBP2O15034 1052 aa16.95■□□□□ 0.3
C9orf3-221ENST00000489562 IL1R1P14778 569 aa16.95■□□□□ 0.3
C9orf3-221ENST00000489562 BCAMP50895 628 aa16.95■□□□□ 0.3
C9orf3-221ENST00000489562 ARHGAP27Q6ZUM4 889 aa16.95■□□□□ 0.3
C9orf3-221ENST00000489562 GPR101Q96P66 508 aaPredicted RBP16.95■□□□□ 0.3
C9orf3-221ENST00000489562 ZNF277Q9NRM2 450 aaPredicted RBP16.95■□□□□ 0.3
C9orf3-221ENST00000489562 PDS5AQ29RF7 1337 aaKnown RBP16.95■□□□□ 0.3
C9orf3-221ENST00000489562 MYH7P12883 1935 aa16.94■□□□□ 0.3
C9orf3-221ENST00000489562 AOC3Q16853 763 aa16.94■□□□□ 0.3
C9orf3-221ENST00000489562 PODNQ7Z5L7 613 aa16.94■□□□□ 0.3
C9orf3-221ENST00000489562 LARGE2Q8N3Y3 721 aa16.94■□□□□ 0.3
C9orf3-221ENST00000489562 CD209Q9NNX6 404 aa16.94■□□□□ 0.3
C9orf3-221ENST00000489562 DENND2AQ9ULE3 1009 aa16.94■□□□□ 0.3
C9orf3-221ENST00000489562 FRAT2O75474 233 aaPredicted RBP16.93■□□□□ 0.3
C9orf3-221ENST00000489562 RGS3P49796 1198 aa16.93■□□□□ 0.3
C9orf3-221ENST00000489562 TDRD7Q8NHU6 1098 aaKnown RBP16.93■□□□□ 0.3
C9orf3-221ENST00000489562 PI4K2BQ8TCG2 481 aa16.93■□□□□ 0.3
C9orf3-221ENST00000489562 SCN9AQ15858 1988 aa16.93■□□□□ 0.3
C9orf3-221ENST00000489562 DOCK2Q92608 1830 aa16.92■□□□□ 0.3
C9orf3-221ENST00000489562 DCAF8L1A6NGE4 600 aa16.92■□□□□ 0.3
C9orf3-221ENST00000489562 LMNB1P20700 586 aa16.92■□□□□ 0.3
C9orf3-221ENST00000489562 RASSF7Q02833 373 aa16.92■□□□□ 0.3
C9orf3-221ENST00000489562 NIM1KQ8IY84 436 aa16.92■□□□□ 0.3
C9orf3-221ENST00000489562 JDP2Q8WYK2 163 aa16.92■□□□□ 0.3
C9orf3-221ENST00000489562 HAUS7Q99871 368 aa16.92■□□□□ 0.3
C9orf3-221ENST00000489562 TIAM2Q8IVF5 1701 aa16.92■□□□□ 0.3
C9orf3-221ENST00000489562 ZNF646O15015 1829 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms