RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 CTU1Q7Z7A3 348 aaKnown RBP13.96□□□□□ -0.17
PTP4A2-206ENST00000489313 ANKRD18AQ8IVF6 992 aa13.96□□□□□ -0.17
PTP4A2-206ENST00000489313 ZNF646O15015 1829 aaPredicted RBP13.96□□□□□ -0.17
PTP4A2-206ENST00000489313 MYH3P11055 1940 aa13.96□□□□□ -0.18
PTP4A2-206ENST00000489313 USP17L3A6NCW0 530 aa13.96□□□□□ -0.18
PTP4A2-206ENST00000489313 USP17L4A6NCW7 530 aa13.96□□□□□ -0.18
PTP4A2-206ENST00000489313 UBE2Q2LH0YL09 131 aa13.96□□□□□ -0.18
PTP4A2-206ENST00000489313 USP17L1Q7RTZ2 530 aa13.96□□□□□ -0.18
PTP4A2-206ENST00000489313 MXD3Q9BW11 206 aa13.96□□□□□ -0.18
PTP4A2-206ENST00000489313 PITPNM2Q9BZ72 1349 aa13.95□□□□□ -0.18
PTP4A2-206ENST00000489313 ATP2B4P23634 1241 aa13.95□□□□□ -0.18
PTP4A2-206ENST00000489313 FKBP1BP68106 108 aa13.95□□□□□ -0.18
PTP4A2-206ENST00000489313 NBPF9Q3BBW0 867 aa13.95□□□□□ -0.18
PTP4A2-206ENST00000489313 C8orf58Q8NAV2 365 aa13.95□□□□□ -0.18
PTP4A2-206ENST00000489313 METTL22Q9BUU2 404 aaPredicted RBP13.95□□□□□ -0.18
PTP4A2-206ENST00000489313 IFT57Q9NWB7 429 aa13.95□□□□□ -0.18
PTP4A2-206ENST00000489313 APAF1O14727 1248 aa13.94□□□□□ -0.18
PTP4A2-206ENST00000489313 PODNQ7Z5L7 613 aa13.94□□□□□ -0.18
PTP4A2-206ENST00000489313 REM2Q8IYK8 340 aaPredicted RBP13.94□□□□□ -0.18
PTP4A2-206ENST00000489313 TBC1D8O95759 1140 aa13.93□□□□□ -0.18
PTP4A2-206ENST00000489313 CTSWP56202 376 aa13.93□□□□□ -0.18
PTP4A2-206ENST00000489313 GNAI1P63096 354 aa13.93□□□□□ -0.18
PTP4A2-206ENST00000489313 TTLL12Q14166 644 aaPredicted RBP13.93□□□□□ -0.18
PTP4A2-206ENST00000489313 FBXW7Q969H0 707 aa13.93□□□□□ -0.18
PTP4A2-206ENST00000489313 HPS5Q9UPZ3 1129 aa13.93□□□□□ -0.18
PTP4A2-206ENST00000489313 MAP3K2Q9Y2U5 619 aa13.93□□□□□ -0.18
PTP4A2-206ENST00000489313 MED23Q9ULK4 1368 aa13.92□□□□□ -0.18
PTP4A2-206ENST00000489313 DDX58O95786 925 aaKnown RBP13.92□□□□□ -0.18
PTP4A2-206ENST00000489313 MKRN3Q13064 507 aaKnown RBP13.92□□□□□ -0.18
PTP4A2-206ENST00000489313 DACT2Q5SW24 774 aa13.92□□□□□ -0.18
PTP4A2-206ENST00000489313 CDC5LQ99459 802 aaKnown RBP13.92□□□□□ -0.18
PTP4A2-206ENST00000489313 GREM2Q9H772 168 aa13.92□□□□□ -0.18
PTP4A2-206ENST00000489313 MINPP1Q9UNW1 487 aa13.92□□□□□ -0.18
PTP4A2-206ENST00000489313 IGKV5-2P06315 115 aa13.92□□□□□ -0.18
PTP4A2-206ENST00000489313 TTLL11Q8NHH1 800 aa13.92□□□□□ -0.18
PTP4A2-206ENST00000489313 ZNF296Q8WUU4 475 aaPredicted RBP13.92□□□□□ -0.18
PTP4A2-206ENST00000489313 HDAC9Q9UKV0 1011 aa13.92□□□□□ -0.18
PTP4A2-206ENST00000489313 PI4KAP2A4QPH2 592 aa13.91□□□□□ -0.18
PTP4A2-206ENST00000489313 WNT10BO00744 389 aa13.91□□□□□ -0.18
PTP4A2-206ENST00000489313 SASH1O94885 1247 aa13.91□□□□□ -0.18
PTP4A2-206ENST00000489313 CCT4P50991 539 aaKnown RBP13.91□□□□□ -0.18
PTP4A2-206ENST00000489313 CALD1Q05682 793 aaKnown RBP13.91□□□□□ -0.18
PTP4A2-206ENST00000489313 CCDC30Q5VVM6 783 aa13.91□□□□□ -0.18
PTP4A2-206ENST00000489313 TXNRD3Q86VQ6 643 aa13.91□□□□□ -0.18
PTP4A2-206ENST00000489313 OGFOD1Q8N543 542 aa13.91□□□□□ -0.18
PTP4A2-206ENST00000489313 TSPYL6Q8N831 410 aa13.91□□□□□ -0.18
PTP4A2-206ENST00000489313 PI4KAP1Q8N8J0 262 aa13.91□□□□□ -0.18
PTP4A2-206ENST00000489313 BSDC1Q9NW68 430 aaPredicted RBP13.91□□□□□ -0.18
PTP4A2-206ENST00000489313 CWF19L2Q2TBE0 894 aaKnown RBP13.9□□□□□ -0.18
PTP4A2-206ENST00000489313 BRCA2P51587 3418 aa13.9□□□□□ -0.19
PTP4A2-206ENST00000489313 PRKG1Q13976 671 aa13.89□□□□□ -0.19
PTP4A2-206ENST00000489313 KSR2Q6VAB6 950 aa13.89□□□□□ -0.19
PTP4A2-206ENST00000489313 KLRK1P26718 216 aa13.88□□□□□ -0.19
PTP4A2-206ENST00000489313 NF2P35240 595 aa13.88□□□□□ -0.19
PTP4A2-206ENST00000489313 TM4SF4P48230 202 aa13.88□□□□□ -0.19
PTP4A2-206ENST00000489313 PTPN12Q05209 780 aaKnown RBP13.88□□□□□ -0.19
PTP4A2-206ENST00000489313 PKN2Q16513 984 aaKnown RBP13.88□□□□□ -0.19
PTP4A2-206ENST00000489313 STRIP1Q5VSL9 837 aa13.88□□□□□ -0.19
PTP4A2-206ENST00000489313 COA1Q9GZY4 146 aa13.88□□□□□ -0.19
PTP4A2-206ENST00000489313 PCDH10Q9P2E7 1040 aa13.88□□□□□ -0.19
PTP4A2-206ENST00000489313 MYO3BQ8WXR4 1341 aa13.88□□□□□ -0.19
PTP4A2-206ENST00000489313 GPR25O00155 361 aa13.88□□□□□ -0.19
PTP4A2-206ENST00000489313 NEXNQ0ZGT2 675 aa13.88□□□□□ -0.19
PTP4A2-206ENST00000489313 PRPF38BQ5VTL8 546 aaKnown RBP13.88□□□□□ -0.19
PTP4A2-206ENST00000489313 UBE3BQ7Z3V4 1068 aa13.88□□□□□ -0.19
PTP4A2-206ENST00000489313 KIAA0825Q8IV33 1275 aa13.88□□□□□ -0.19
PTP4A2-206ENST00000489313 TSR2Q969E8 191 aaKnown RBP13.88□□□□□ -0.19
PTP4A2-206ENST00000489313 R3HDMLQ9H3Y0 253 aa13.88□□□□□ -0.19
PTP4A2-206ENST00000489313 FZD1Q9UP38 647 aa13.88□□□□□ -0.19
PTP4A2-206ENST00000489313 NEURL1BA8MQ27 555 aa13.87□□□□□ -0.19
PTP4A2-206ENST00000489313 TTLL5Q6EMB2 1281 aa13.87□□□□□ -0.19
PTP4A2-206ENST00000489313 G2E3Q7L622 706 aa13.87□□□□□ -0.19
PTP4A2-206ENST00000489313 PRKRIP1Q9H875 184 aaPredicted RBP13.87□□□□□ -0.19
PTP4A2-206ENST00000489313 IGHMBP2P38935 993 aaKnown RBP13.86□□□□□ -0.19
PTP4A2-206ENST00000489313 SREBF2Q12772 1141 aa13.86□□□□□ -0.19
PTP4A2-206ENST00000489313 ARMC9Q7Z3E5 817 aa13.86□□□□□ -0.19
PTP4A2-206ENST00000489313 STK31Q9BXU1 1019 aa13.86□□□□□ -0.19
PTP4A2-206ENST00000489313 CHMP4AQ9BY43 222 aa13.86□□□□□ -0.19
PTP4A2-206ENST00000489313 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.86□□□□□ -0.19
PTP4A2-206ENST00000489313 LEMD3Q9Y2U8 911 aa13.86□□□□□ -0.19
PTP4A2-206ENST00000489313 ZNF804BA4D1E1 1349 aa13.86□□□□□ -0.19
PTP4A2-206ENST00000489313 H7C1W4 665 aa13.85□□□□□ -0.19
PTP4A2-206ENST00000489313 ITGA6P23229 1130 aa13.85□□□□□ -0.19
PTP4A2-206ENST00000489313 GTF2IP78347 998 aa13.85□□□□□ -0.19
PTP4A2-206ENST00000489313 APOBEC3FQ8IUX4 373 aaKnown RBP13.85□□□□□ -0.19
PTP4A2-206ENST00000489313 ANGEL1Q9UNK9 670 aaKnown RBP13.85□□□□□ -0.19
PTP4A2-206ENST00000489313 FKTNO75072 461 aa13.84□□□□□ -0.19
PTP4A2-206ENST00000489313 NOM1Q5C9Z4 860 aaKnown RBP13.84□□□□□ -0.19
PTP4A2-206ENST00000489313 LDLRAD1Q5T700 205 aa13.84□□□□□ -0.19
PTP4A2-206ENST00000489313 FBXO46Q6PJ61 603 aaPredicted RBP13.84□□□□□ -0.19
PTP4A2-206ENST00000489313 ZBED3Q96IU2 234 aaPredicted RBP13.84□□□□□ -0.19
PTP4A2-206ENST00000489313 SNAP23O00161 211 aa13.83□□□□□ -0.19
PTP4A2-206ENST00000489313 KCNJ4P48050 445 aa13.83□□□□□ -0.19
PTP4A2-206ENST00000489313 SPRYD7Q5W111 196 aa13.83□□□□□ -0.19
PTP4A2-206ENST00000489313 MPHOSPH8Q99549 860 aa13.83□□□□□ -0.19
PTP4A2-206ENST00000489313 ANKRD2Q9GZV1 360 aa13.83□□□□□ -0.19
PTP4A2-206ENST00000489313 ECM29Q5VYK3 1845 aa13.83□□□□□ -0.19
PTP4A2-206ENST00000489313 A0A1B0GUL6 1792 aa13.83□□□□□ -0.2
PTP4A2-206ENST00000489313 SLC4A2P04920 1241 aa13.83□□□□□ -0.2
PTP4A2-206ENST00000489313 MMP14P50281 582 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms