RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 NRXN2Q9P2S2 1712 aa12.11□□□□□ -0.47
USP11-211ENST00000489111 H0YIN7 160 aa12.11□□□□□ -0.47
USP11-211ENST00000489111 ALDH1B1P30837 517 aa12.11□□□□□ -0.47
USP11-211ENST00000489111 TTF1Q15361 905 aaPredicted RBP12.11□□□□□ -0.47
USP11-211ENST00000489111 CWC27Q6UX04 472 aaKnown RBP12.11□□□□□ -0.47
USP11-211ENST00000489111 KIAA1211Q6ZU35 1233 aa12.11□□□□□ -0.47
USP11-211ENST00000489111 TICAM2Q86XR7 235 aa12.11□□□□□ -0.47
USP11-211ENST00000489111 ANO2Q9NQ90 1003 aa12.11□□□□□ -0.47
USP11-211ENST00000489111 LEMD3Q9Y2U8 911 aa12.11□□□□□ -0.47
USP11-211ENST00000489111 SGSM2O43147 1006 aa12.1□□□□□ -0.47
USP11-211ENST00000489111 MCCP23508 829 aa12.1□□□□□ -0.47
USP11-211ENST00000489111 POLD1P28340 1107 aa12.1□□□□□ -0.47
USP11-211ENST00000489111 MCAMP43121 646 aa12.1□□□□□ -0.47
USP11-211ENST00000489111 ZAP70P43403 619 aa12.1□□□□□ -0.47
USP11-211ENST00000489111 BCAMP50895 628 aa12.1□□□□□ -0.47
USP11-211ENST00000489111 NMIQ13287 307 aaPredicted RBP12.1□□□□□ -0.47
USP11-211ENST00000489111 SCARF1Q14162 830 aa12.1□□□□□ -0.47
USP11-211ENST00000489111 R3HDM1Q15032 1099 aaKnown RBP12.1□□□□□ -0.47
USP11-211ENST00000489111 STYK1Q6J9G0 422 aa12.1□□□□□ -0.47
USP11-211ENST00000489111 ZNF622Q969S3 477 aaKnown RBP eCLIP12.1□□□□□ -0.47
USP11-211ENST00000489111 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.1□□□□□ -0.47
USP11-211ENST00000489111 GGA1Q9UJY5 639 aa12.1□□□□□ -0.47
USP11-211ENST00000489111 C10orf71Q711Q0 1435 aa12.1□□□□□ -0.47
USP11-211ENST00000489111 FRAT2O75474 233 aaPredicted RBP12.09□□□□□ -0.47
USP11-211ENST00000489111 UFL1O94874 794 aa12.09□□□□□ -0.47
USP11-211ENST00000489111 ZBTB7AO95365 584 aa12.09□□□□□ -0.47
USP11-211ENST00000489111 ATP2B4P23634 1241 aa12.09□□□□□ -0.47
USP11-211ENST00000489111 GYG1P46976 350 aa12.09□□□□□ -0.47
USP11-211ENST00000489111 GPSM2P81274 684 aa12.09□□□□□ -0.47
USP11-211ENST00000489111 RASGRF1Q13972 1273 aa12.09□□□□□ -0.47
USP11-211ENST00000489111 PI16Q6UXB8 463 aa12.09□□□□□ -0.47
USP11-211ENST00000489111 SPATA5Q8NB90 893 aa12.09□□□□□ -0.47
USP11-211ENST00000489111 DDRGK1Q96HY6 314 aa12.09□□□□□ -0.47
USP11-211ENST00000489111 MTFR1LQ9H019 292 aa12.09□□□□□ -0.47
USP11-211ENST00000489111 NSFL1CQ9UNZ2 370 aaKnown RBP12.09□□□□□ -0.47
USP11-211ENST00000489111 ATP6V0A2Q9Y487 856 aa12.09□□□□□ -0.47
USP11-211ENST00000489111 A0A0D9SFI3 127 aa12.08□□□□□ -0.48
USP11-211ENST00000489111 SEMA3EO15041 775 aa12.08□□□□□ -0.48
USP11-211ENST00000489111 ZFYP08048 801 aaPredicted RBP12.08□□□□□ -0.48
USP11-211ENST00000489111 HIBADHP31937 336 aaKnown RBP12.08□□□□□ -0.48
USP11-211ENST00000489111 RBM25P49756 843 aaKnown RBP12.08□□□□□ -0.48
USP11-211ENST00000489111 ZSCAN25Q6NSZ9 544 aa12.08□□□□□ -0.48
USP11-211ENST00000489111 ZNF804AQ7Z570 1209 aa12.08□□□□□ -0.48
USP11-211ENST00000489111 SP8Q8IXZ3 490 aa12.08□□□□□ -0.48
USP11-211ENST00000489111 CNKSR1Q969H4 720 aa12.08□□□□□ -0.48
USP11-211ENST00000489111 FAM227BQ96M60 508 aa12.08□□□□□ -0.48
USP11-211ENST00000489111 HMG20BQ9P0W2 317 aa12.08□□□□□ -0.48
USP11-211ENST00000489111 ARAP2Q8WZ64 1704 aa12.08□□□□□ -0.48
USP11-211ENST00000489111 SPEF2Q9C093 1822 aa12.07□□□□□ -0.48
USP11-211ENST00000489111 RNF113AO15541 343 aaKnown RBP12.07□□□□□ -0.48
USP11-211ENST00000489111 EPB41L2O43491 1005 aaKnown RBP12.07□□□□□ -0.48
USP11-211ENST00000489111 IDH1O75874 414 aaKnown RBP12.07□□□□□ -0.48
USP11-211ENST00000489111 KLRK1P26718 216 aa12.07□□□□□ -0.48
USP11-211ENST00000489111 CHRNA5P30532 468 aa12.07□□□□□ -0.48
USP11-211ENST00000489111 WASHC4Q2M389 1173 aa12.07□□□□□ -0.48
USP11-211ENST00000489111 FBXO33Q7Z6M2 555 aa12.07□□□□□ -0.48
USP11-211ENST00000489111 FAM84BQ96KN1 310 aaPredicted RBP12.07□□□□□ -0.48
USP11-211ENST00000489111 USP26Q9BXU7 913 aa12.07□□□□□ -0.48
USP11-211ENST00000489111 ANTXR1Q9H6X2 564 aa12.07□□□□□ -0.48
USP11-211ENST00000489111 PODXL2Q9NZ53 605 aa12.07□□□□□ -0.48
USP11-211ENST00000489111 DENND2AQ9ULE3 1009 aa12.07□□□□□ -0.48
USP11-211ENST00000489111 WTIPA6NIX2 430 aaPredicted RBP12.06□□□□□ -0.48
USP11-211ENST00000489111 C6orf229H3BNL8 230 aa12.06□□□□□ -0.48
USP11-211ENST00000489111 CYP2E1P05181 493 aaPredicted RBP12.06□□□□□ -0.48
USP11-211ENST00000489111 PRPF40BQ6NWY9 871 aaKnown RBP12.06□□□□□ -0.48
USP11-211ENST00000489111 DPP8Q6V1X1 898 aaPredicted RBP12.06□□□□□ -0.48
USP11-211ENST00000489111 SLC51AQ86UW1 340 aa12.06□□□□□ -0.48
USP11-211ENST00000489111 PIH1D3Q9NQM4 214 aaKnown RBP12.06□□□□□ -0.48
USP11-211ENST00000489111 HELLSQ9NRZ9 838 aa12.06□□□□□ -0.48
USP11-211ENST00000489111 IQSEC3Q9UPP2 1182 aaPredicted RBP12.06□□□□□ -0.48
USP11-211ENST00000489111 ATF5Q9Y2D1 282 aaPredicted RBP12.06□□□□□ -0.48
USP11-211ENST00000489111 PDS5AQ29RF7 1337 aaKnown RBP12.06□□□□□ -0.48
USP11-211ENST00000489111 MED23Q9ULK4 1368 aa12.05□□□□□ -0.48
USP11-211ENST00000489111 MAP3K12Q12852 859 aa12.05□□□□□ -0.48
USP11-211ENST00000489111 MCMDC2Q4G0Z9 681 aa12.05□□□□□ -0.48
USP11-211ENST00000489111 ZMYM1Q5SVZ6 1142 aa12.05□□□□□ -0.48
USP11-211ENST00000489111 C15orf52Q6ZUT6 534 aaKnown RBP12.05□□□□□ -0.48
USP11-211ENST00000489111 MPNDQ8N594 471 aa12.05□□□□□ -0.48
USP11-211ENST00000489111 TBC1D16Q8TBP0 767 aa12.05□□□□□ -0.48
USP11-211ENST00000489111 IL25Q9H293 177 aa12.05□□□□□ -0.48
USP11-211ENST00000489111 LRP2BPQ9P2M1 347 aa12.05□□□□□ -0.48
USP11-211ENST00000489111 DAXXQ9UER7 740 aaPredicted RBP12.05□□□□□ -0.48
USP11-211ENST00000489111 CCDC171Q6TFL3 1326 aa12.05□□□□□ -0.48
USP11-211ENST00000489111 ANKRD31Q8N7Z5 1873 aa12.04□□□□□ -0.48
USP11-211ENST00000489111 PSDA5PKW4 1024 aaPredicted RBP12.04□□□□□ -0.48
USP11-211ENST00000489111 CHAF1AQ13111 956 aaPredicted RBP12.04□□□□□ -0.48
USP11-211ENST00000489111 SLC9C2Q5TAH2 1124 aa12.04□□□□□ -0.48
USP11-211ENST00000489111 APPBP2Q92624 585 aa12.04□□□□□ -0.48
USP11-211ENST00000489111 LSG1Q9H089 658 aaKnown RBP12.04□□□□□ -0.48
USP11-211ENST00000489111 CASZ1Q86V15 1759 aa12.04□□□□□ -0.48
USP11-211ENST00000489111 IRS2Q9Y4H2 1338 aa12.04□□□□□ -0.48
USP11-211ENST00000489111 COL11A2P13942 1736 aaPredicted RBP12.03□□□□□ -0.48
USP11-211ENST00000489111 PDE6AP16499 860 aa12.03□□□□□ -0.48
USP11-211ENST00000489111 BECN1Q14457 450 aa12.03□□□□□ -0.48
USP11-211ENST00000489111 UBE3CQ15386 1083 aa12.03□□□□□ -0.48
USP11-211ENST00000489111 ZNF589Q86UQ0 364 aaPredicted RBP12.03□□□□□ -0.48
USP11-211ENST00000489111 TXNRD3Q86VQ6 643 aa12.03□□□□□ -0.48
USP11-211ENST00000489111 GPR101Q96P66 508 aaPredicted RBP12.03□□□□□ -0.48
USP11-211ENST00000489111 IPO9Q96P70 1041 aaKnown RBP12.03□□□□□ -0.48
USP11-211ENST00000489111 EYA3Q99504 573 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms