RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 STK31Q9BXU1 1019 aa24.48■■□□□ 1.51
GGPS1-206ENST00000488594 GREM2Q9H772 168 aa24.48■■□□□ 1.51
GGPS1-206ENST00000488594 CTU1Q7Z7A3 348 aaKnown RBP24.47■■□□□ 1.51
GGPS1-206ENST00000488594 TSPYL6Q8N831 410 aa24.47■■□□□ 1.51
GGPS1-206ENST00000488594 COA1Q9GZY4 146 aa24.47■■□□□ 1.51
GGPS1-206ENST00000488594 CCT4P50991 539 aaKnown RBP24.46■■□□□ 1.51
GGPS1-206ENST00000488594 DACT2Q5SW24 774 aa24.46■■□□□ 1.51
GGPS1-206ENST00000488594 STRIP1Q5VSL9 837 aa24.46■■□□□ 1.51
GGPS1-206ENST00000488594 AKAP11Q9UKA4 1901 aa24.46■■□□□ 1.51
GGPS1-206ENST00000488594 LEMD3Q9Y2U8 911 aa24.45■■□□□ 1.5
GGPS1-206ENST00000488594 NF2P35240 595 aa24.44■■□□□ 1.5
GGPS1-206ENST00000488594 IGHMBP2P38935 993 aaKnown RBP24.44■■□□□ 1.5
GGPS1-206ENST00000488594 NBPF9Q3BBW0 867 aa24.44■■□□□ 1.5
GGPS1-206ENST00000488594 WTIPA6NIX2 430 aaPredicted RBP24.43■■□□□ 1.5
GGPS1-206ENST00000488594 NEURL1BA8MQ27 555 aa24.43■■□□□ 1.5
GGPS1-206ENST00000488594 UBE2Q2LH0YL09 131 aa24.42■■□□□ 1.5
GGPS1-206ENST00000488594 H7C1W4 665 aa24.42■■□□□ 1.5
GGPS1-206ENST00000488594 WNT10BO00744 389 aa24.42■■□□□ 1.5
GGPS1-206ENST00000488594 CWF19L2Q2TBE0 894 aaKnown RBP24.42■■□□□ 1.5
GGPS1-206ENST00000488594 MOB2Q70IA6 237 aa24.42■■□□□ 1.5
GGPS1-206ENST00000488594 ANKRD2Q9GZV1 360 aa24.42■■□□□ 1.5
GGPS1-206ENST00000488594 TTLL12Q14166 644 aaPredicted RBP24.42■■□□□ 1.5
GGPS1-206ENST00000488594 PKN2Q16513 984 aaKnown RBP24.42■■□□□ 1.5
GGPS1-206ENST00000488594 UBE3BQ7Z3V4 1068 aa24.42■■□□□ 1.5
GGPS1-206ENST00000488594 FBXW7Q969H0 707 aa24.42■■□□□ 1.5
GGPS1-206ENST00000488594 SCAF8Q9UPN6 1271 aaKnown RBP24.42■■□□□ 1.5
GGPS1-206ENST00000488594 TSR2Q969E8 191 aaKnown RBP24.41■■□□□ 1.5
GGPS1-206ENST00000488594 MXD3Q9BW11 206 aa24.41■■□□□ 1.5
GGPS1-206ENST00000488594 PLA2G12BQ9BX93 195 aa24.41■■□□□ 1.5
GGPS1-206ENST00000488594 SOX10P56693 466 aa24.4■■□□□ 1.5
GGPS1-206ENST00000488594 CCDC27Q2M243 656 aa24.4■■□□□ 1.5
GGPS1-206ENST00000488594 TWISTNBQ3B726 338 aaPredicted RBP24.4■■□□□ 1.5
GGPS1-206ENST00000488594 PRAMEF18Q5VWM3 479 aa24.4■■□□□ 1.5
GGPS1-206ENST00000488594 HDAC9Q9UKV0 1011 aa24.4■■□□□ 1.5
GGPS1-206ENST00000488594 ZNF804BA4D1E1 1349 aa24.4■■□□□ 1.5
GGPS1-206ENST00000488594 TM4SF4P48230 202 aa24.39■■□□□ 1.49
GGPS1-206ENST00000488594 NOM1Q5C9Z4 860 aaKnown RBP24.39■■□□□ 1.49
GGPS1-206ENST00000488594 TTLL5Q6EMB2 1281 aa24.39■■□□□ 1.49
GGPS1-206ENST00000488594 TXNRD3Q86VQ6 643 aa24.39■■□□□ 1.49
GGPS1-206ENST00000488594 APOBEC3FQ8IUX4 373 aaKnown RBP24.39■■□□□ 1.49
GGPS1-206ENST00000488594 MPHOSPH8Q99549 860 aa24.39■■□□□ 1.49
GGPS1-206ENST00000488594 SLC4A2P04920 1241 aa24.38■■□□□ 1.49
GGPS1-206ENST00000488594 ITGA6P23229 1130 aa24.38■■□□□ 1.49
GGPS1-206ENST00000488594 GCKRQ14397 625 aa24.38■■□□□ 1.49
GGPS1-206ENST00000488594 MYH16Q9H6N6 1097 aa24.38■■□□□ 1.49
GGPS1-206ENST00000488594 MYH3P11055 1940 aa24.38■■□□□ 1.49
GGPS1-206ENST00000488594 SASH1O94885 1247 aa24.37■■□□□ 1.49
GGPS1-206ENST00000488594 SREBF2Q12772 1141 aa24.37■■□□□ 1.49
GGPS1-206ENST00000488594 ARMC9Q7Z3E5 817 aa24.37■■□□□ 1.49
GGPS1-206ENST00000488594 TBC1D8O95759 1140 aa24.36■■□□□ 1.49
GGPS1-206ENST00000488594 G2E3Q7L622 706 aa24.36■■□□□ 1.49
GGPS1-206ENST00000488594 ZNF296Q8WUU4 475 aaPredicted RBP24.36■■□□□ 1.49
GGPS1-206ENST00000488594 HPS5Q9UPZ3 1129 aa24.36■■□□□ 1.49
GGPS1-206ENST00000488594 CSF1RP07333 972 aa24.35■■□□□ 1.49
GGPS1-206ENST00000488594 KCNJ4P48050 445 aa24.35■■□□□ 1.49
GGPS1-206ENST00000488594 KIAA0825Q8IV33 1275 aa24.35■■□□□ 1.49
GGPS1-206ENST00000488594 WWC1Q8IX03 1113 aa24.35■■□□□ 1.49
GGPS1-206ENST00000488594 IL16Q14005 1332 aa24.34■■□□□ 1.49
GGPS1-206ENST00000488594 FLIIQ13045 1269 aa24.34■■□□□ 1.49
GGPS1-206ENST00000488594 LINS1Q8NG48 757 aa24.34■■□□□ 1.49
GGPS1-206ENST00000488594 SPEF2Q9C093 1822 aa24.33■■□□□ 1.49
GGPS1-206ENST00000488594 KLRK1P26718 216 aa24.33■■□□□ 1.49
GGPS1-206ENST00000488594 CASP7P55210 303 aa24.33■■□□□ 1.49
GGPS1-206ENST00000488594 GTF2IP78347 998 aa24.33■■□□□ 1.49
GGPS1-206ENST00000488594 DNAAF4Q8WXU2 420 aa24.33■■□□□ 1.49
GGPS1-206ENST00000488594 ZBED3Q96IU2 234 aaPredicted RBP24.33■■□□□ 1.49
GGPS1-206ENST00000488594 CFHR5Q9BXR6 569 aa24.33■■□□□ 1.49
GGPS1-206ENST00000488594 COL1A1P02452 1464 aaPredicted RBP24.33■■□□□ 1.48
GGPS1-206ENST00000488594 ZNF646O15015 1829 aaPredicted RBP24.33■■□□□ 1.48
GGPS1-206ENST00000488594 GPR25O00155 361 aa24.32■■□□□ 1.48
GGPS1-206ENST00000488594 PTPN12Q05209 780 aaKnown RBP24.32■■□□□ 1.48
GGPS1-206ENST00000488594 CHRNDQ07001 517 aa24.32■■□□□ 1.48
GGPS1-206ENST00000488594 FKBP5Q13451 457 aaPredicted RBP24.32■■□□□ 1.48
GGPS1-206ENST00000488594 NCBP3Q53F19 620 aaKnown RBP24.31■■□□□ 1.48
GGPS1-206ENST00000488594 LDLRAD1Q5T700 205 aa24.31■■□□□ 1.48
GGPS1-206ENST00000488594 CD209Q9NNX6 404 aa24.31■■□□□ 1.48
GGPS1-206ENST00000488594 PDE4DIPQ5VU43 2346 aa24.31■■□□□ 1.48
GGPS1-206ENST00000488594 ANKRD18BA2A2Z9 1011 aa24.3■■□□□ 1.48
GGPS1-206ENST00000488594 MKRN3Q13064 507 aaKnown RBP24.3■■□□□ 1.48
GGPS1-206ENST00000488594 C15orf52Q6ZUT6 534 aaKnown RBP24.3■■□□□ 1.48
GGPS1-206ENST00000488594 ALDH1A1P00352 501 aa24.29■■□□□ 1.48
GGPS1-206ENST00000488594 DLGAP5Q15398 846 aa24.29■■□□□ 1.48
GGPS1-206ENST00000488594 DEFB129Q9H1M3 183 aa24.29■■□□□ 1.48
GGPS1-206ENST00000488594 PCDH10Q9P2E7 1040 aa24.29■■□□□ 1.48
GGPS1-206ENST00000488594 ANGEL1Q9UNK9 670 aaKnown RBP24.29■■□□□ 1.48
GGPS1-206ENST00000488594 PRKG1Q13976 671 aa24.29■■□□□ 1.48
GGPS1-206ENST00000488594 SPRYD7Q5W111 196 aa24.29■■□□□ 1.48
GGPS1-206ENST00000488594 FBXO46Q6PJ61 603 aaPredicted RBP24.29■■□□□ 1.48
GGPS1-206ENST00000488594 MTMR14Q8NCE2 650 aa24.29■■□□□ 1.48
GGPS1-206ENST00000488594 PPP2R3BQ9Y5P8 575 aa24.29■■□□□ 1.48
GGPS1-206ENST00000488594 FKTNO75072 461 aa24.28■■□□□ 1.48
GGPS1-206ENST00000488594 INHBEP58166 350 aa24.28■■□□□ 1.48
GGPS1-206ENST00000488594 IFIT5Q13325 482 aaKnown RBP24.28■■□□□ 1.48
GGPS1-206ENST00000488594 TNRC18O15417 2968 aaPredicted RBP24.27■■□□□ 1.48
GGPS1-206ENST00000488594 MYO1BO43795 1136 aa24.27■■□□□ 1.48
GGPS1-206ENST00000488594 PRPF38BQ5VTL8 546 aaKnown RBP24.27■■□□□ 1.48
GGPS1-206ENST00000488594 IRS2Q9Y4H2 1338 aa24.26■■□□□ 1.47
GGPS1-206ENST00000488594 MANSC4A6NHS7 340 aaPredicted RBP24.26■■□□□ 1.47
GGPS1-206ENST00000488594 UNCXA6NJT0 531 aa24.26■■□□□ 1.47
GGPS1-206ENST00000488594 FKBP1AP62942 108 aaKnown RBP24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms