RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 MYD88Q99836 296 aa14.06□□□□□ -0.16
LCN2-206ENST00000488391 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.06□□□□□ -0.16
LCN2-206ENST00000488391 TRIM35Q9UPQ4 493 aa14.06□□□□□ -0.16
LCN2-206ENST00000488391 PDE8AO60658 829 aa14.05□□□□□ -0.16
LCN2-206ENST00000488391 HOXB7P09629 217 aa14.05□□□□□ -0.16
LCN2-206ENST00000488391 HSP90B1P14625 803 aaKnown RBP14.05□□□□□ -0.16
LCN2-206ENST00000488391 ATP2B4P23634 1241 aa14.05□□□□□ -0.16
LCN2-206ENST00000488391 PTPN12Q05209 780 aaKnown RBP14.05□□□□□ -0.16
LCN2-206ENST00000488391 ANKRD18AQ8IVF6 992 aa14.05□□□□□ -0.16
LCN2-206ENST00000488391 PHAXQ9H814 394 aaKnown RBP14.05□□□□□ -0.16
LCN2-206ENST00000488391 XDHP47989 1333 aa14.05□□□□□ -0.16
LCN2-206ENST00000488391 WNT10BO00744 389 aa14.04□□□□□ -0.16
LCN2-206ENST00000488391 NF2P35240 595 aa14.04□□□□□ -0.16
LCN2-206ENST00000488391 GOLGA2Q08379 1002 aa14.04□□□□□ -0.16
LCN2-206ENST00000488391 SREBF2Q12772 1141 aa14.04□□□□□ -0.16
LCN2-206ENST00000488391 NOM1Q5C9Z4 860 aaKnown RBP14.04□□□□□ -0.16
LCN2-206ENST00000488391 OGFOD1Q8N543 542 aa14.04□□□□□ -0.16
LCN2-206ENST00000488391 ZNF609O15014 1411 aa14.04□□□□□ -0.16
LCN2-206ENST00000488391 PCCAP05165 728 aaPredicted RBP14.03□□□□□ -0.16
LCN2-206ENST00000488391 DACT2Q5SW24 774 aa14.03□□□□□ -0.16
LCN2-206ENST00000488391 PSME4Q14997 1843 aa14.03□□□□□ -0.16
LCN2-206ENST00000488391 ELL2O00472 640 aaPredicted RBP14.02□□□□□ -0.17
LCN2-206ENST00000488391 APAF1O14727 1248 aa14.02□□□□□ -0.17
LCN2-206ENST00000488391 SASH1O94885 1247 aa14.02□□□□□ -0.17
LCN2-206ENST00000488391 ARMC9Q7Z3E5 817 aa14.02□□□□□ -0.17
LCN2-206ENST00000488391 CCDC191Q8NCU4 936 aa14.02□□□□□ -0.17
LCN2-206ENST00000488391 GCC1Q96CN9 775 aa14.02□□□□□ -0.17
LCN2-206ENST00000488391 CWC25Q9NXE8 425 aaPredicted RBP14.02□□□□□ -0.17
LCN2-206ENST00000488391 FZD1Q9UP38 647 aa14.02□□□□□ -0.17
LCN2-206ENST00000488391 ZNF521Q96K83 1311 aa14.01□□□□□ -0.17
LCN2-206ENST00000488391 CCDC27Q2M243 656 aa14.01□□□□□ -0.17
LCN2-206ENST00000488391 HABP4Q5JVS0 413 aaKnown RBP14.01□□□□□ -0.17
LCN2-206ENST00000488391 SPRYD7Q5W111 196 aa14.01□□□□□ -0.17
LCN2-206ENST00000488391 MBIPQ9NS73 344 aa14.01□□□□□ -0.17
LCN2-206ENST00000488391 ANGEL1Q9UNK9 670 aaKnown RBP14.01□□□□□ -0.17
LCN2-206ENST00000488391 MINPP1Q9UNW1 487 aa14.01□□□□□ -0.17
LCN2-206ENST00000488391 TRIM17Q9Y577 477 aa14.01□□□□□ -0.17
LCN2-206ENST00000488391 POTEFA5A3E0 1075 aa14□□□□□ -0.17
LCN2-206ENST00000488391 LDLRAD1Q5T700 205 aa14□□□□□ -0.17
LCN2-206ENST00000488391 STRIP1Q5VSL9 837 aa14□□□□□ -0.17
LCN2-206ENST00000488391 TXNRD3Q86VQ6 643 aa14□□□□□ -0.17
LCN2-206ENST00000488391 SLC10A4Q96EP9 437 aa14□□□□□ -0.17
LCN2-206ENST00000488391 CDC5LQ99459 802 aaKnown RBP14□□□□□ -0.17
LCN2-206ENST00000488391 CFHR5Q9BXR6 569 aa14□□□□□ -0.17
LCN2-206ENST00000488391 KIAA0100Q14667 2235 aaKnown RBP14□□□□□ -0.17
LCN2-206ENST00000488391 CCT4P50991 539 aaKnown RBP13.99□□□□□ -0.17
LCN2-206ENST00000488391 TTLL5Q6EMB2 1281 aa13.99□□□□□ -0.17
LCN2-206ENST00000488391 KIAA0825Q8IV33 1275 aa13.99□□□□□ -0.17
LCN2-206ENST00000488391 METTL22Q9BUU2 404 aaPredicted RBP13.99□□□□□ -0.17
LCN2-206ENST00000488391 BSDC1Q9NW68 430 aaPredicted RBP13.99□□□□□ -0.17
LCN2-206ENST00000488391 MED23Q9ULK4 1368 aa13.98□□□□□ -0.17
LCN2-206ENST00000488391 ALDH1A1P00352 501 aa13.98□□□□□ -0.17
LCN2-206ENST00000488391 CTSWP56202 376 aa13.98□□□□□ -0.17
LCN2-206ENST00000488391 OTOP1Q7RTM1 612 aa13.98□□□□□ -0.17
LCN2-206ENST00000488391 IFNL1Q8IU54 200 aa13.98□□□□□ -0.17
LCN2-206ENST00000488391 APOBEC3FQ8IUX4 373 aaKnown RBP13.98□□□□□ -0.17
LCN2-206ENST00000488391 TTLL11Q8NHH1 800 aa13.98□□□□□ -0.17
LCN2-206ENST00000488391 COA1Q9GZY4 146 aa13.98□□□□□ -0.17
LCN2-206ENST00000488391 GREM2Q9H772 168 aa13.98□□□□□ -0.17
LCN2-206ENST00000488391 MYO3BQ8WXR4 1341 aa13.97□□□□□ -0.17
LCN2-206ENST00000488391 MANSC4A6NHS7 340 aaPredicted RBP13.97□□□□□ -0.17
LCN2-206ENST00000488391 INHBEP58166 350 aa13.97□□□□□ -0.17
LCN2-206ENST00000488391 GTF2IP78347 998 aa13.97□□□□□ -0.17
LCN2-206ENST00000488391 INTS3Q68E01 1043 aaKnown RBP13.97□□□□□ -0.17
LCN2-206ENST00000488391 CLMNQ96JQ2 1002 aa13.97□□□□□ -0.17
LCN2-206ENST00000488391 ZNF853P0CG23 659 aa13.96□□□□□ -0.17
LCN2-206ENST00000488391 KLRK1P26718 216 aa13.96□□□□□ -0.17
LCN2-206ENST00000488391 DEFB129Q9H1M3 183 aa13.96□□□□□ -0.17
LCN2-206ENST00000488391 MAP3K2Q9Y2U5 619 aa13.96□□□□□ -0.17
LCN2-206ENST00000488391 SALL2Q9Y467 1007 aaPredicted RBP13.96□□□□□ -0.17
LCN2-206ENST00000488391 IGF2BP3O00425 579 aaKnown RBP eCLIP13.95□□□□□ -0.18
LCN2-206ENST00000488391 DDX58O95786 925 aaKnown RBP13.95□□□□□ -0.18
LCN2-206ENST00000488391 IGKV5-2P06315 115 aa13.95□□□□□ -0.18
LCN2-206ENST00000488391 EN2P19622 333 aaPredicted RBP13.95□□□□□ -0.18
LCN2-206ENST00000488391 WDR63Q8IWG1 891 aa13.95□□□□□ -0.18
LCN2-206ENST00000488391 WWC1Q8IX03 1113 aa13.95□□□□□ -0.18
LCN2-206ENST00000488391 C8orf58Q8NAV2 365 aa13.95□□□□□ -0.18
LCN2-206ENST00000488391 CD99L2Q8TCZ2 262 aa13.95□□□□□ -0.18
LCN2-206ENST00000488391 ZBED3Q96IU2 234 aaPredicted RBP13.95□□□□□ -0.18
LCN2-206ENST00000488391 WNK4Q96J92 1243 aa13.95□□□□□ -0.18
LCN2-206ENST00000488391 PTPN22Q9Y2R2 807 aa13.95□□□□□ -0.18
LCN2-206ENST00000488391 LEMD3Q9Y2U8 911 aa13.95□□□□□ -0.18
LCN2-206ENST00000488391 SPEF2Q9C093 1822 aa13.94□□□□□ -0.18
LCN2-206ENST00000488391 ZNF804BA4D1E1 1349 aa13.94□□□□□ -0.18
LCN2-206ENST00000488391 MMP14P50281 582 aa13.94□□□□□ -0.18
LCN2-206ENST00000488391 DLGAP5Q15398 846 aa13.94□□□□□ -0.18
LCN2-206ENST00000488391 ERO1AQ96HE7 468 aa13.94□□□□□ -0.18
LCN2-206ENST00000488391 PCDHAC2Q9Y5I4 1007 aa13.94□□□□□ -0.18
LCN2-206ENST00000488391 MKI67P46013 3256 aaKnown RBP13.94□□□□□ -0.18
LCN2-206ENST00000488391 ZNF646O15015 1829 aaPredicted RBP13.93□□□□□ -0.18
LCN2-206ENST00000488391 PI4KAP2A4QPH2 592 aa13.93□□□□□ -0.18
LCN2-206ENST00000488391 E9PSI1 815 aa13.93□□□□□ -0.18
LCN2-206ENST00000488391 PPP1R12BO60237 982 aaPredicted RBP13.93□□□□□ -0.18
LCN2-206ENST00000488391 IGHMBP2P38935 993 aaKnown RBP13.93□□□□□ -0.18
LCN2-206ENST00000488391 MAP3K11Q16584 847 aa13.93□□□□□ -0.18
LCN2-206ENST00000488391 CWF19L2Q2TBE0 894 aaKnown RBP13.93□□□□□ -0.18
LCN2-206ENST00000488391 KSR2Q6VAB6 950 aa13.93□□□□□ -0.18
LCN2-206ENST00000488391 PI4KAP1Q8N8J0 262 aa13.93□□□□□ -0.18
LCN2-206ENST00000488391 IL16Q14005 1332 aa13.92□□□□□ -0.18
LCN2-206ENST00000488391 F8W031 263 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms