RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 DZANK1Q9NVP4 752 aa8.82□□□□□ -1
VPS8-224ENST00000488255 FAM177BA6PVY3 158 aa8.81□□□□□ -1
VPS8-224ENST00000488255 LINC01387J3KSC0 135 aa8.81□□□□□ -1
VPS8-224ENST00000488255 EDN3P14138 238 aa8.81□□□□□ -1
VPS8-224ENST00000488255 ELNP15502 786 aa8.81□□□□□ -1
VPS8-224ENST00000488255 CDC27P30260 824 aa8.81□□□□□ -1
VPS8-224ENST00000488255 SPOCK3Q9BQ16 436 aa8.81□□□□□ -1
VPS8-224ENST00000488255 PPME1Q9Y570 386 aa8.81□□□□□ -1
VPS8-224ENST00000488255 GPR182O15218 404 aa8.8□□□□□ -1
VPS8-224ENST00000488255 FAM129BQ96TA1 746 aa8.8□□□□□ -1
VPS8-224ENST00000488255 ZKSCAN3Q9BRR0 538 aa8.8□□□□□ -1
VPS8-224ENST00000488255 DCTN4Q9UJW0 460 aa8.8□□□□□ -1
VPS8-224ENST00000488255 USP21Q9UK80 565 aa8.8□□□□□ -1
VPS8-224ENST00000488255 PDE2AO00408 941 aaPredicted RBP8.79□□□□□ -1
VPS8-224ENST00000488255 DEAF1O75398 565 aaPredicted RBP8.79□□□□□ -1
VPS8-224ENST00000488255 NEFLP07196 543 aa8.79□□□□□ -1
VPS8-224ENST00000488255 SELPP16109 830 aa8.79□□□□□ -1
VPS8-224ENST00000488255 PTPRAP18433 802 aa8.79□□□□□ -1
VPS8-224ENST00000488255 FBXO11Q86XK2 927 aa8.79□□□□□ -1
VPS8-224ENST00000488255 ASAP3Q8TDY4 903 aa8.79□□□□□ -1
VPS8-224ENST00000488255 NACC1Q96RE7 527 aa8.79□□□□□ -1
VPS8-224ENST00000488255 CITED4Q96RK1 184 aa8.79□□□□□ -1
VPS8-224ENST00000488255 NFKBIEO00221 500 aa8.78□□□□□ -1
VPS8-224ENST00000488255 ILDR2Q71H61 639 aa8.78□□□□□ -1
VPS8-224ENST00000488255 TMC7Q7Z402 723 aa8.78□□□□□ -1
VPS8-224ENST00000488255 DTWD1Q8N5C7 304 aa8.78□□□□□ -1
VPS8-224ENST00000488255 CARD10Q9BWT7 1032 aa8.78□□□□□ -1
VPS8-224ENST00000488255 RBCK1Q9BYM8 510 aa8.78□□□□□ -1
VPS8-224ENST00000488255 CPNE3O75131 537 aaKnown RBP8.77□□□□□ -1.01
VPS8-224ENST00000488255 EPHA1P21709 976 aa8.77□□□□□ -1.01
VPS8-224ENST00000488255 PEAR1Q5VY43 1037 aaPredicted RBP8.77□□□□□ -1.01
VPS8-224ENST00000488255 EIF1AYO14602 144 aaKnown RBP8.76□□□□□ -1.01
VPS8-224ENST00000488255 IGHA1P01876 353 aa8.76□□□□□ -1.01
VPS8-224ENST00000488255 PROCP04070 461 aa8.76□□□□□ -1.01
VPS8-224ENST00000488255 GATA4P43694 442 aa8.76□□□□□ -1.01
VPS8-224ENST00000488255 CABP4P57796 275 aa8.76□□□□□ -1.01
VPS8-224ENST00000488255 SETDB1Q15047 1291 aa8.76□□□□□ -1.01
VPS8-224ENST00000488255 FAM117BQ6P1L5 589 aa8.76□□□□□ -1.01
VPS8-224ENST00000488255 CACTIN-AS1Q8N1I8 211 aa8.76□□□□□ -1.01
VPS8-224ENST00000488255 NXPE3Q969Y0 559 aa8.76□□□□□ -1.01
VPS8-224ENST00000488255 DMRTB1Q96MA1 342 aa8.76□□□□□ -1.01
VPS8-224ENST00000488255 MUC3BQ9H195 1237 aa8.76□□□□□ -1.01
VPS8-224ENST00000488255 METTL12A8MUP2 240 aa8.75□□□□□ -1.01
VPS8-224ENST00000488255 C9orf172C9J069 976 aa8.75□□□□□ -1.01
VPS8-224ENST00000488255 PATL2C9JE40 543 aaKnown RBP8.75□□□□□ -1.01
VPS8-224ENST00000488255 IGHA2P01877 340 aa8.75□□□□□ -1.01
VPS8-224ENST00000488255 GALNT12Q8IXK2 581 aa8.75□□□□□ -1.01
VPS8-224ENST00000488255 TMEM102Q8N9M5 508 aaPredicted RBP8.75□□□□□ -1.01
VPS8-224ENST00000488255 SLC7A3Q8WY07 619 aa8.75□□□□□ -1.01
VPS8-224ENST00000488255 NPHS2Q9NP85 383 aa8.75□□□□□ -1.01
VPS8-224ENST00000488255 A0A1W2PP55 124 aa8.74□□□□□ -1.01
VPS8-224ENST00000488255 DOC2BQ14184 412 aa8.74□□□□□ -1.01
VPS8-224ENST00000488255 GALNT11Q8NCW6 608 aa8.74□□□□□ -1.01
VPS8-224ENST00000488255 LENG1Q96BZ8 264 aaPredicted RBP8.74□□□□□ -1.01
VPS8-224ENST00000488255 CSRNP1Q96S65 589 aa8.74□□□□□ -1.01
VPS8-224ENST00000488255 ADAM19Q9H013 955 aa8.74□□□□□ -1.01
VPS8-224ENST00000488255 DLL1O00548 723 aa8.73□□□□□ -1.01
VPS8-224ENST00000488255 FSCN2O14926 492 aa8.73□□□□□ -1.01
VPS8-224ENST00000488255 PLCB3Q01970 1234 aa8.73□□□□□ -1.01
VPS8-224ENST00000488255 MBTPS1Q14703 1052 aa8.73□□□□□ -1.01
VPS8-224ENST00000488255 IGF2-ASQ6U949 168 aa8.73□□□□□ -1.01
VPS8-224ENST00000488255 CCDC74AQ96AQ1 378 aa8.73□□□□□ -1.01
VPS8-224ENST00000488255 LIN7BQ9HAP6 207 aa8.73□□□□□ -1.01
VPS8-224ENST00000488255 DDX3YO15523 660 aaKnown RBP8.72□□□□□ -1.01
VPS8-224ENST00000488255 GADD45BO75293 160 aaPredicted RBP8.72□□□□□ -1.01
VPS8-224ENST00000488255 NRG1Q02297 640 aaPredicted RBP8.72□□□□□ -1.01
VPS8-224ENST00000488255 BSNDQ8WZ55 320 aa8.72□□□□□ -1.01
VPS8-224ENST00000488255 EHD4Q9H223 541 aa8.72□□□□□ -1.01
VPS8-224ENST00000488255 H3BRJ5 948 aa8.71□□□□□ -1.02
VPS8-224ENST00000488255 ALX3O95076 343 aa8.71□□□□□ -1.02
VPS8-224ENST00000488255 MAPK8P45983 427 aa8.71□□□□□ -1.02
VPS8-224ENST00000488255 IREB2P48200 963 aaKnown RBP8.71□□□□□ -1.02
VPS8-224ENST00000488255 ADGRE1Q14246 886 aa8.71□□□□□ -1.02
VPS8-224ENST00000488255 SPRED3Q2MJR0 410 aa8.71□□□□□ -1.02
VPS8-224ENST00000488255 HGSNATQ68CP4 663 aa8.71□□□□□ -1.02
VPS8-224ENST00000488255 MAP4K3Q8IVH8 894 aa8.71□□□□□ -1.02
VPS8-224ENST00000488255 ZSCAN29Q8IWY8 852 aaPredicted RBP8.71□□□□□ -1.02
VPS8-224ENST00000488255 EPS8L3Q8TE67 593 aaKnown RBP8.71□□□□□ -1.02
VPS8-224ENST00000488255 KLHDC7BQ96G42 594 aa8.71□□□□□ -1.02
VPS8-224ENST00000488255 SEC31BQ9NQW1 1179 aa8.71□□□□□ -1.02
VPS8-224ENST00000488255 KCNK4Q9NYG8 393 aa8.71□□□□□ -1.02
VPS8-224ENST00000488255 SOX13Q9UN79 622 aa8.71□□□□□ -1.02
VPS8-224ENST00000488255 PNMA6FA0A0J9YX94 578 aa8.7□□□□□ -1.02
VPS8-224ENST00000488255 FURINP09958 794 aa8.7□□□□□ -1.02
VPS8-224ENST00000488255 CD68P34810 354 aaPredicted RBP8.7□□□□□ -1.02
VPS8-224ENST00000488255 IKBKEQ14164 716 aa8.7□□□□□ -1.02
VPS8-224ENST00000488255 FOXD4L6Q3SYB3 417 aaPredicted RBP8.7□□□□□ -1.02
VPS8-224ENST00000488255 FOXD4L3Q6VB84 417 aaPredicted RBP8.7□□□□□ -1.02
VPS8-224ENST00000488255 ALKBH8Q96BT7 664 aaKnown RBP8.7□□□□□ -1.02
VPS8-224ENST00000488255 BHLHE41Q9C0J9 482 aaPredicted RBP8.7□□□□□ -1.02
VPS8-224ENST00000488255 DNAJC25Q9H1X3 360 aa8.7□□□□□ -1.02
VPS8-224ENST00000488255 SRA1Q9HD15 236 aaKnown RBP8.7□□□□□ -1.02
VPS8-224ENST00000488255 NLRP12P59046 1061 aa8.69□□□□□ -1.02
VPS8-224ENST00000488255 PI16Q6UXB8 463 aa8.69□□□□□ -1.02
VPS8-224ENST00000488255 VN1R5Q7Z5H4 357 aa8.69□□□□□ -1.02
VPS8-224ENST00000488255 TXNRD3Q86VQ6 643 aa8.69□□□□□ -1.02
VPS8-224ENST00000488255 AGGF1Q8N302 714 aaeCLIP8.69□□□□□ -1.02
VPS8-224ENST00000488255 WFDC12Q8WWY7 111 aa8.69□□□□□ -1.02
VPS8-224ENST00000488255 A0A096LPE4 126 aa8.68□□□□□ -1.02
VPS8-224ENST00000488255 A0A1W2PPZ6 126 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms