RNA–Protein interactions for RNA: ENST00000487428.1

PTPRE-209, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-209ENST00000487428 LARGE2Q8N3Y3 721 aa8.25□□□□□ -1.09
PTPRE-209ENST00000487428 DPF2Q92785 391 aa8.25□□□□□ -1.09
PTPRE-209ENST00000487428 ZNF512BQ96KM6 892 aaPredicted RBP8.25□□□□□ -1.09
PTPRE-209ENST00000487428 PUS3Q9BZE2 481 aaKnown RBP8.25□□□□□ -1.09
PTPRE-209ENST00000487428 ZNF277Q9NRM2 450 aaPredicted RBP8.25□□□□□ -1.09
PTPRE-209ENST00000487428 CEP126Q9P2H0 1117 aa8.25□□□□□ -1.09
PTPRE-209ENST00000487428 FAM205AQ6ZU69 1335 aa8.25□□□□□ -1.09
PTPRE-209ENST00000487428 MYO3BQ8WXR4 1341 aa8.25□□□□□ -1.09
PTPRE-209ENST00000487428 MYH7P12883 1935 aa8.25□□□□□ -1.09
PTPRE-209ENST00000487428 C6orf229H3BNL8 230 aa8.24□□□□□ -1.09
PTPRE-209ENST00000487428 SASH1O94885 1247 aa8.24□□□□□ -1.09
PTPRE-209ENST00000487428 VIL1P09327 827 aaKnown RBP8.24□□□□□ -1.09
PTPRE-209ENST00000487428 EIF6P56537 245 aaKnown RBP8.24□□□□□ -1.09
PTPRE-209ENST00000487428 G3BP1Q13283 466 aaKnown RBP eCLIP8.24□□□□□ -1.09
PTPRE-209ENST00000487428 TNIP1Q15025 636 aa8.24□□□□□ -1.09
PTPRE-209ENST00000487428 AOC3Q16853 763 aa8.24□□□□□ -1.09
PTPRE-209ENST00000487428 METTL24Q5JXM2 366 aa8.24□□□□□ -1.09
PTPRE-209ENST00000487428 STRIP1Q5VSL9 837 aa8.24□□□□□ -1.09
PTPRE-209ENST00000487428 TDRD7Q8NHU6 1098 aaKnown RBP8.24□□□□□ -1.09
PTPRE-209ENST00000487428 DCTPP1Q9H773 170 aa8.24□□□□□ -1.09
PTPRE-209ENST00000487428 SUGT1Q9Y2Z0 365 aa8.24□□□□□ -1.09
PTPRE-209ENST00000487428 SUPT16HQ9Y5B9 1047 aaKnown RBP8.24□□□□□ -1.09
PTPRE-209ENST00000487428 YDJCA8MPS7 323 aa8.23□□□□□ -1.09
PTPRE-209ENST00000487428 ECE2O60344 883 aa8.23□□□□□ -1.09
PTPRE-209ENST00000487428 IFIT1P09914 478 aaKnown RBP8.23□□□□□ -1.09
PTPRE-209ENST00000487428 SLC5A1P13866 664 aa8.23□□□□□ -1.09
PTPRE-209ENST00000487428 CXCL9Q07325 125 aa8.23□□□□□ -1.09
PTPRE-209ENST00000487428 TMED8Q6PL24 325 aaPredicted RBP8.23□□□□□ -1.09
PTPRE-209ENST00000487428 ZNF804AQ7Z570 1209 aa8.23□□□□□ -1.09
PTPRE-209ENST00000487428 AGBL3Q8NEM8 1001 aa8.23□□□□□ -1.09
PTPRE-209ENST00000487428 KLHDC4Q8TBB5 520 aa8.23□□□□□ -1.09
PTPRE-209ENST00000487428 KIF1BPQ96EK5 621 aa8.23□□□□□ -1.09
PTPRE-209ENST00000487428 FAM84BQ96KN1 310 aaPredicted RBP8.23□□□□□ -1.09
PTPRE-209ENST00000487428 GMLQ99445 158 aa8.23□□□□□ -1.09
PTPRE-209ENST00000487428 CD209Q9NNX6 404 aa8.23□□□□□ -1.09
PTPRE-209ENST00000487428 ZNF219Q9P2Y4 722 aaPredicted RBP8.23□□□□□ -1.09
PTPRE-209ENST00000487428 WWC3Q9ULE0 1092 aa8.23□□□□□ -1.09
PTPRE-209ENST00000487428 PA2G4Q9UQ80 394 aaKnown RBP8.23□□□□□ -1.09
PTPRE-209ENST00000487428 MYO5AQ9Y4I1 1855 aaKnown RBP8.23□□□□□ -1.09
PTPRE-209ENST00000487428 SALL1Q9NSC2 1324 aa8.23□□□□□ -1.09
PTPRE-209ENST00000487428 MYH2Q9UKX2 1941 aa8.23□□□□□ -1.09
PTPRE-209ENST00000487428 TRPM7Q96QT4 1865 aa8.22□□□□□ -1.09
PTPRE-209ENST00000487428 IQCA1LA6NCM1 817 aa8.22□□□□□ -1.09
PTPRE-209ENST00000487428 USP17L3A6NCW0 530 aa8.22□□□□□ -1.09
PTPRE-209ENST00000487428 USP17L4A6NCW7 530 aa8.22□□□□□ -1.09
PTPRE-209ENST00000487428 TAF5LO75529 589 aa8.22□□□□□ -1.09
PTPRE-209ENST00000487428 SURF6O75683 361 aaKnown RBP8.22□□□□□ -1.09
PTPRE-209ENST00000487428 CENPBP07199 599 aaPredicted RBP8.22□□□□□ -1.09
PTPRE-209ENST00000487428 YY1P25490 414 aa8.22□□□□□ -1.09
PTPRE-209ENST00000487428 HIBADHP31937 336 aaKnown RBP8.22□□□□□ -1.09
PTPRE-209ENST00000487428 KCNJ4P48050 445 aa8.22□□□□□ -1.09
PTPRE-209ENST00000487428 ATP2B3Q16720 1220 aa8.22□□□□□ -1.09
PTPRE-209ENST00000487428 CAVIN4Q5BKX8 364 aa8.22□□□□□ -1.09
PTPRE-209ENST00000487428 ERICH6BQ5W0A0 696 aa8.22□□□□□ -1.09
PTPRE-209ENST00000487428 CIAPIN1Q6FI81 312 aa8.22□□□□□ -1.09
PTPRE-209ENST00000487428 USP17L1Q7RTZ2 530 aa8.22□□□□□ -1.09
PTPRE-209ENST00000487428 SLC51AQ86UW1 340 aa8.22□□□□□ -1.09
PTPRE-209ENST00000487428 TXNRD3Q86VQ6 643 aa8.22□□□□□ -1.09
PTPRE-209ENST00000487428 TBC1D22AQ8WUA7 517 aa8.22□□□□□ -1.09
PTPRE-209ENST00000487428 CRBNQ96SW2 442 aa8.22□□□□□ -1.09
PTPRE-209ENST00000487428 MRIQ9BWK5 157 aa8.22□□□□□ -1.09
PTPRE-209ENST00000487428 C1orf115Q9H7X2 142 aa8.22□□□□□ -1.09
PTPRE-209ENST00000487428 PCDHB15Q9Y5E8 787 aa8.22□□□□□ -1.09
PTPRE-209ENST00000487428 MAST2Q6P0Q8 1798 aa8.22□□□□□ -1.09
PTPRE-209ENST00000487428 A0A1B0GUL7 405 aa8.21□□□□□ -1.1
PTPRE-209ENST00000487428 VEGFAP15692 232 aaPredicted RBP8.21□□□□□ -1.1
PTPRE-209ENST00000487428 ARID4AP29374 1257 aaPredicted RBP8.21□□□□□ -1.1
PTPRE-209ENST00000487428 HDLBPQ00341 1268 aaKnown RBP8.21□□□□□ -1.1
PTPRE-209ENST00000487428 TNNI3KQ59H18 835 aa8.21□□□□□ -1.1
PTPRE-209ENST00000487428 SMC5Q8IY18 1101 aa8.21□□□□□ -1.1
PTPRE-209ENST00000487428 ZNF784Q8NCA9 323 aaPredicted RBP8.21□□□□□ -1.1
PTPRE-209ENST00000487428 HELBQ8NG08 1087 aaPredicted RBP8.21□□□□□ -1.1
PTPRE-209ENST00000487428 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.21□□□□□ -1.1
PTPRE-209ENST00000487428 GCC1Q96CN9 775 aa8.21□□□□□ -1.1
PTPRE-209ENST00000487428 FPGT-TNNI3KV9GXZ4 949 aa8.21□□□□□ -1.1
PTPRE-209ENST00000487428 ZNF541Q9H0D2 1346 aa8.21□□□□□ -1.1
PTPRE-209ENST00000487428 WTIPA6NIX2 430 aaPredicted RBP8.2□□□□□ -1.1
PTPRE-209ENST00000487428 POTECB2RU33 542 aa8.2□□□□□ -1.1
PTPRE-209ENST00000487428 SCNN1DP51172 638 aa8.2□□□□□ -1.1
PTPRE-209ENST00000487428 ZNF280AP59817 542 aaPredicted RBP8.2□□□□□ -1.1
PTPRE-209ENST00000487428 TFCP2Q12800 502 aa8.2□□□□□ -1.1
PTPRE-209ENST00000487428 DACT2Q5SW24 774 aa8.2□□□□□ -1.1
PTPRE-209ENST00000487428 RSBN1LQ6PCB5 846 aaPredicted RBP8.2□□□□□ -1.1
PTPRE-209ENST00000487428 TICAM2Q86XR7 235 aa8.2□□□□□ -1.1
PTPRE-209ENST00000487428 MTMR14Q8NCE2 650 aa8.2□□□□□ -1.1
PTPRE-209ENST00000487428 WDR66Q8TBY9 1149 aa8.2□□□□□ -1.1
PTPRE-209ENST00000487428 RHPN1Q8TCX5 695 aa8.2□□□□□ -1.1
PTPRE-209ENST00000487428 ZC3H15Q8WU90 426 aaKnown RBP8.2□□□□□ -1.1
PTPRE-209ENST00000487428 SIL1Q9H173 461 aa8.2□□□□□ -1.1
PTPRE-209ENST00000487428 DBNDD1Q9H9R9 158 aa8.2□□□□□ -1.1
PTPRE-209ENST00000487428 GNL3LQ9NVN8 582 aaKnown RBP8.2□□□□□ -1.1
PTPRE-209ENST00000487428 GPRC5DQ9NZD1 345 aa8.2□□□□□ -1.1
PTPRE-209ENST00000487428 PGAP2Q9UHJ9 254 aa8.2□□□□□ -1.1
PTPRE-209ENST00000487428 DENND2AQ9ULE3 1009 aa8.2□□□□□ -1.1
PTPRE-209ENST00000487428 FOCADQ5VW36 1801 aa8.19□□□□□ -1.1
PTPRE-209ENST00000487428 CDK5RAP2Q96SN8 1893 aa8.19□□□□□ -1.1
PTPRE-209ENST00000487428 AK9Q5TCS8 1911 aa8.19□□□□□ -1.1
PTPRE-209ENST00000487428 SNAP23O00161 211 aa8.19□□□□□ -1.1
PTPRE-209ENST00000487428 PSMD14O00487 310 aa8.19□□□□□ -1.1
PTPRE-209ENST00000487428 RIMBP2O15034 1052 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms