RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 CSF1RP07333 972 aa16.29■□□□□ 0.2
SSR4-211ENST00000486204 CCT4P50991 539 aaKnown RBP16.29■□□□□ 0.2
SSR4-211ENST00000486204 FOXO4P98177 505 aa16.29■□□□□ 0.2
SSR4-211ENST00000486204 TNIP1Q15025 636 aa16.29■□□□□ 0.2
SSR4-211ENST00000486204 PKN2Q16513 984 aaKnown RBP16.29■□□□□ 0.2
SSR4-211ENST00000486204 CCDC152Q4G0S7 254 aa16.29■□□□□ 0.2
SSR4-211ENST00000486204 INTS3Q68E01 1043 aaKnown RBP16.29■□□□□ 0.2
SSR4-211ENST00000486204 SUPT20HQ8NEM7 779 aa16.29■□□□□ 0.2
SSR4-211ENST00000486204 USP44Q9H0E7 712 aa16.29■□□□□ 0.2
SSR4-211ENST00000486204 IPO8O15397 1037 aaKnown RBP16.28■□□□□ 0.2
SSR4-211ENST00000486204 RAD17O75943 681 aa16.28■□□□□ 0.2
SSR4-211ENST00000486204 ZKSCAN2Q63HK3 967 aa16.28■□□□□ 0.2
SSR4-211ENST00000486204 SUCLG2Q96I99 432 aa16.28■□□□□ 0.2
SSR4-211ENST00000486204 CCDC85AQ96PX6 553 aaPredicted RBP16.28■□□□□ 0.2
SSR4-211ENST00000486204 GREM2Q9H772 168 aa16.28■□□□□ 0.2
SSR4-211ENST00000486204 C9orf78Q9NZ63 289 aaPredicted RBP16.28■□□□□ 0.2
SSR4-211ENST00000486204 ATP6V0A2Q9Y487 856 aa16.28■□□□□ 0.2
SSR4-211ENST00000486204 ZNF646O15015 1829 aaPredicted RBP16.28■□□□□ 0.2
SSR4-211ENST00000486204 SHTN1A0MZ66 631 aa16.27■□□□□ 0.2
SSR4-211ENST00000486204 BBOX1O75936 387 aa16.27■□□□□ 0.2
SSR4-211ENST00000486204 RCAN3Q9UKA8 241 aa16.27■□□□□ 0.2
SSR4-211ENST00000486204 KRT26Q7Z3Y9 468 aa16.26■□□□□ 0.19
SSR4-211ENST00000486204 SP8Q8IXZ3 490 aa16.26■□□□□ 0.19
SSR4-211ENST00000486204 RTFDC1Q9BY42 306 aaPredicted RBP16.26■□□□□ 0.19
SSR4-211ENST00000486204 HDAC9Q9UKV0 1011 aa16.26■□□□□ 0.19
SSR4-211ENST00000486204 SLC10A3P09131 477 aa16.25■□□□□ 0.19
SSR4-211ENST00000486204 RPS8P62241 208 aaKnown RBP16.25■□□□□ 0.19
SSR4-211ENST00000486204 RABL6Q3YEC7 729 aaPredicted RBP16.25■□□□□ 0.19
SSR4-211ENST00000486204 TMC4Q7Z404 712 aa16.25■□□□□ 0.19
SSR4-211ENST00000486204 MICALL2Q8IY33 904 aa16.25■□□□□ 0.19
SSR4-211ENST00000486204 REM2Q8IYK8 340 aaPredicted RBP16.25■□□□□ 0.19
SSR4-211ENST00000486204 CLUAP1Q96AJ1 413 aa16.25■□□□□ 0.19
SSR4-211ENST00000486204 SCN9AQ15858 1988 aa16.25■□□□□ 0.19
SSR4-211ENST00000486204 RLBP1P12271 317 aa16.24■□□□□ 0.19
SSR4-211ENST00000486204 KIAA2012Q0VF49 1180 aa16.24■□□□□ 0.19
SSR4-211ENST00000486204 DPP8Q6V1X1 898 aaPredicted RBP16.24■□□□□ 0.19
SSR4-211ENST00000486204 SAMD7Q7Z3H4 446 aa16.24■□□□□ 0.19
SSR4-211ENST00000486204 TMEM57Q8N5G2 664 aa16.24■□□□□ 0.19
SSR4-211ENST00000486204 ANKRD44Q8N8A2 993 aa16.24■□□□□ 0.19
SSR4-211ENST00000486204 DCPSQ96C86 337 aaKnown RBP16.24■□□□□ 0.19
SSR4-211ENST00000486204 ADM5C9JUS6 153 aa16.23■□□□□ 0.19
SSR4-211ENST00000486204 ITGA6P23229 1130 aa16.23■□□□□ 0.19
SSR4-211ENST00000486204 LMBR1LQ6UX01 489 aa16.23■□□□□ 0.19
SSR4-211ENST00000486204 MEIS3Q99687 375 aa16.23■□□□□ 0.19
SSR4-211ENST00000486204 BICC1Q9H694 974 aaKnown RBP16.23■□□□□ 0.19
SSR4-211ENST00000486204 AKAP11Q9UKA4 1901 aa16.22■□□□□ 0.19
SSR4-211ENST00000486204 YDJCA8MPS7 323 aa16.22■□□□□ 0.19
SSR4-211ENST00000486204 ANKRD18AQ8IVF6 992 aa16.22■□□□□ 0.19
SSR4-211ENST00000486204 MPNDQ8N594 471 aa16.22■□□□□ 0.19
SSR4-211ENST00000486204 DPF2Q92785 391 aa16.22■□□□□ 0.19
SSR4-211ENST00000486204 CDC5LQ99459 802 aaKnown RBP16.22■□□□□ 0.19
SSR4-211ENST00000486204 ZBTB12Q9Y330 459 aaPredicted RBP16.22■□□□□ 0.19
SSR4-211ENST00000486204 TBC1D10BQ4KMP7 808 aaPredicted RBP16.21■□□□□ 0.19
SSR4-211ENST00000486204 DZIP1LQ8IYY4 767 aaKnown RBP16.21■□□□□ 0.19
SSR4-211ENST00000486204 ZNF296Q8WUU4 475 aaPredicted RBP16.21■□□□□ 0.19
SSR4-211ENST00000486204 MYH13Q9UKX3 1938 aa16.21■□□□□ 0.19
SSR4-211ENST00000486204 ARAP2Q8WZ64 1704 aa16.2■□□□□ 0.18
SSR4-211ENST00000486204 UBTFL1P0CB47 393 aaPredicted RBP16.2■□□□□ 0.18
SSR4-211ENST00000486204 GPSM2P81274 684 aa16.2■□□□□ 0.18
SSR4-211ENST00000486204 RBM26Q5T8P6 1007 aaKnown RBP16.2■□□□□ 0.18
SSR4-211ENST00000486204 FBXO46Q6PJ61 603 aaPredicted RBP16.2■□□□□ 0.18
SSR4-211ENST00000486204 ANKRD18BA2A2Z9 1011 aa16.19■□□□□ 0.18
SSR4-211ENST00000486204 TBC1D8O95759 1140 aa16.19■□□□□ 0.18
SSR4-211ENST00000486204 EGFRP00533 1210 aa16.19■□□□□ 0.18
SSR4-211ENST00000486204 FXR1P51114 621 aaKnown RBP eCLIP16.19■□□□□ 0.18
SSR4-211ENST00000486204 IFIT5Q13325 482 aaKnown RBP16.19■□□□□ 0.18
SSR4-211ENST00000486204 RASAL3Q86YV0 1011 aa16.19■□□□□ 0.18
SSR4-211ENST00000486204 PANK1Q8TE04 598 aa16.19■□□□□ 0.18
SSR4-211ENST00000486204 BSDC1Q9NW68 430 aaPredicted RBP16.19■□□□□ 0.18
SSR4-211ENST00000486204 PODXL2Q9NZ53 605 aa16.19■□□□□ 0.18
SSR4-211ENST00000486204 CHMP3Q9Y3E7 222 aa16.19■□□□□ 0.18
SSR4-211ENST00000486204 PSMD14O00487 310 aa16.18■□□□□ 0.18
SSR4-211ENST00000486204 PLIN1O60240 522 aa16.18■□□□□ 0.18
SSR4-211ENST00000486204 FTSJ3Q8IY81 847 aaKnown RBP16.18■□□□□ 0.18
SSR4-211ENST00000486204 ZNF594Q96JF6 807 aaPredicted RBP16.18■□□□□ 0.18
SSR4-211ENST00000486204 LRRFIP2Q9Y608 721 aaKnown RBP16.18■□□□□ 0.18
SSR4-211ENST00000486204 GNAI3P08754 354 aa16.17■□□□□ 0.18
SSR4-211ENST00000486204 IGHMBP2P38935 993 aaKnown RBP16.17■□□□□ 0.18
SSR4-211ENST00000486204 CCDC57Q2TAC2 916 aa16.17■□□□□ 0.18
SSR4-211ENST00000486204 SULF1Q8IWU6 871 aa16.17■□□□□ 0.18
SSR4-211ENST00000486204 POLLQ9UGP5 575 aa16.17■□□□□ 0.18
SSR4-211ENST00000486204 MINPP1Q9UNW1 487 aa16.17■□□□□ 0.18
SSR4-211ENST00000486204 NSFL1CQ9UNZ2 370 aaKnown RBP16.17■□□□□ 0.18
SSR4-211ENST00000486204 RFX5P48382 616 aaPredicted RBP16.16■□□□□ 0.18
SSR4-211ENST00000486204 TBC1D16Q8TBP0 767 aa16.16■□□□□ 0.18
SSR4-211ENST00000486204 XDHP47989 1333 aa16.16■□□□□ 0.18
SSR4-211ENST00000486204 GPR25O00155 361 aa16.15■□□□□ 0.18
SSR4-211ENST00000486204 MTX1Q13505 466 aa16.15■□□□□ 0.18
SSR4-211ENST00000486204 ITPRIPQ8IWB1 547 aa16.15■□□□□ 0.18
SSR4-211ENST00000486204 CDCA5Q96FF9 252 aa16.15■□□□□ 0.18
SSR4-211ENST00000486204 MPHOSPH8Q99549 860 aa16.15■□□□□ 0.18
SSR4-211ENST00000486204 WTIPA6NIX2 430 aaPredicted RBP16.14■□□□□ 0.17
SSR4-211ENST00000486204 ZBTB7BO15156 539 aaPredicted RBP16.14■□□□□ 0.17
SSR4-211ENST00000486204 RPS12P25398 132 aaKnown RBP16.14■□□□□ 0.17
SSR4-211ENST00000486204 C20orf194Q5TEA3 1177 aa16.14■□□□□ 0.17
SSR4-211ENST00000486204 KLHDC4Q8TBB5 520 aa16.14■□□□□ 0.17
SSR4-211ENST00000486204 PUS3Q9BZE2 481 aaKnown RBP16.14■□□□□ 0.17
SSR4-211ENST00000486204 UFL1O94874 794 aa16.13■□□□□ 0.17
SSR4-211ENST00000486204 MS4A1P11836 297 aa16.13■□□□□ 0.17
SSR4-211ENST00000486204 FKBP1BP68106 108 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms