RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 MED23Q9ULK4 1368 aa20.82■□□□□ 0.92
PDE6D-205ENST00000486044 APAF1O14727 1248 aa20.81■□□□□ 0.92
PDE6D-205ENST00000486044 NEXNQ0ZGT2 675 aa20.81■□□□□ 0.92
PDE6D-205ENST00000486044 C8orf58Q8NAV2 365 aa20.81■□□□□ 0.92
PDE6D-205ENST00000486044 MINPP1Q9UNW1 487 aa20.81■□□□□ 0.92
PDE6D-205ENST00000486044 NBPF9Q3BBW0 867 aa20.8■□□□□ 0.92
PDE6D-205ENST00000486044 STRIP1Q5VSL9 837 aa20.8■□□□□ 0.92
PDE6D-205ENST00000486044 KSR2Q6VAB6 950 aa20.8■□□□□ 0.92
PDE6D-205ENST00000486044 MOB2Q70IA6 237 aa20.8■□□□□ 0.92
PDE6D-205ENST00000486044 TTLL11Q8NHH1 800 aa20.8■□□□□ 0.92
PDE6D-205ENST00000486044 COA1Q9GZY4 146 aa20.8■□□□□ 0.92
PDE6D-205ENST00000486044 HPS5Q9UPZ3 1129 aa20.8■□□□□ 0.92
PDE6D-205ENST00000486044 TBC1D8O95759 1140 aa20.79■□□□□ 0.92
PDE6D-205ENST00000486044 TM4SF4P48230 202 aa20.79■□□□□ 0.92
PDE6D-205ENST00000486044 CCT4P50991 539 aaKnown RBP20.79■□□□□ 0.92
PDE6D-205ENST00000486044 DACT2Q5SW24 774 aa20.79■□□□□ 0.92
PDE6D-205ENST00000486044 PRAMEF18Q5VWM3 479 aa20.79■□□□□ 0.92
PDE6D-205ENST00000486044 FBXW7Q969H0 707 aa20.79■□□□□ 0.92
PDE6D-205ENST00000486044 SCAF8Q9UPN6 1271 aaKnown RBP20.79■□□□□ 0.92
PDE6D-205ENST00000486044 WNT10BO00744 389 aa20.78■□□□□ 0.92
PDE6D-205ENST00000486044 SREBF2Q12772 1141 aa20.78■□□□□ 0.92
PDE6D-205ENST00000486044 NOM1Q5C9Z4 860 aaKnown RBP20.78■□□□□ 0.92
PDE6D-205ENST00000486044 ZNF296Q8WUU4 475 aaPredicted RBP20.78■□□□□ 0.92
PDE6D-205ENST00000486044 GREM2Q9H772 168 aa20.78■□□□□ 0.92
PDE6D-205ENST00000486044 LEMD3Q9Y2U8 911 aa20.78■□□□□ 0.92
PDE6D-205ENST00000486044 PI4KAP2A4QPH2 592 aa20.77■□□□□ 0.92
PDE6D-205ENST00000486044 IGHMBP2P38935 993 aaKnown RBP20.77■□□□□ 0.92
PDE6D-205ENST00000486044 ARMC9Q7Z3E5 817 aa20.77■□□□□ 0.92
PDE6D-205ENST00000486044 PI4KAP1Q8N8J0 262 aa20.77■□□□□ 0.92
PDE6D-205ENST00000486044 STK31Q9BXU1 1019 aa20.77■□□□□ 0.92
PDE6D-205ENST00000486044 WTIPA6NIX2 430 aaPredicted RBP20.76■□□□□ 0.91
PDE6D-205ENST00000486044 IGKV5-2P06315 115 aa20.76■□□□□ 0.91
PDE6D-205ENST00000486044 PRPF38BQ5VTL8 546 aaKnown RBP20.76■□□□□ 0.91
PDE6D-205ENST00000486044 APOBEC3FQ8IUX4 373 aaKnown RBP20.76■□□□□ 0.91
PDE6D-205ENST00000486044 ANKRD2Q9GZV1 360 aa20.76■□□□□ 0.91
PDE6D-205ENST00000486044 MYH3P11055 1940 aa20.75■□□□□ 0.91
PDE6D-205ENST00000486044 GPR25O00155 361 aa20.75■□□□□ 0.91
PDE6D-205ENST00000486044 TTLL5Q6EMB2 1281 aa20.75■□□□□ 0.91
PDE6D-205ENST00000486044 MXD3Q9BW11 206 aa20.75■□□□□ 0.91
PDE6D-205ENST00000486044 MKRN3Q13064 507 aaKnown RBP20.73■□□□□ 0.91
PDE6D-205ENST00000486044 FBXO46Q6PJ61 603 aaPredicted RBP20.73■□□□□ 0.91
PDE6D-205ENST00000486044 UBE3BQ7Z3V4 1068 aa20.73■□□□□ 0.91
PDE6D-205ENST00000486044 MPHOSPH8Q99549 860 aa20.73■□□□□ 0.91
PDE6D-205ENST00000486044 ZNF804BA4D1E1 1349 aa20.73■□□□□ 0.91
PDE6D-205ENST00000486044 SPEF2Q9C093 1822 aa20.72■□□□□ 0.91
PDE6D-205ENST00000486044 NEURL1BA8MQ27 555 aa20.72■□□□□ 0.91
PDE6D-205ENST00000486044 H7C1W4 665 aa20.72■□□□□ 0.91
PDE6D-205ENST00000486044 FKTNO75072 461 aa20.72■□□□□ 0.91
PDE6D-205ENST00000486044 SASH1O94885 1247 aa20.72■□□□□ 0.91
PDE6D-205ENST00000486044 ALDH1A1P00352 501 aa20.72■□□□□ 0.91
PDE6D-205ENST00000486044 PTPN12Q05209 780 aaKnown RBP20.72■□□□□ 0.91
PDE6D-205ENST00000486044 CWF19L2Q2TBE0 894 aaKnown RBP20.72■□□□□ 0.91
PDE6D-205ENST00000486044 KIAA0825Q8IV33 1275 aa20.72■□□□□ 0.91
PDE6D-205ENST00000486044 TSPYL6Q8N831 410 aa20.72■□□□□ 0.91
PDE6D-205ENST00000486044 CFHR5Q9BXR6 569 aa20.72■□□□□ 0.91
PDE6D-205ENST00000486044 PRKRIP1Q9H875 184 aaPredicted RBP20.72■□□□□ 0.91
PDE6D-205ENST00000486044 KCNJ4P48050 445 aa20.71■□□□□ 0.91
PDE6D-205ENST00000486044 INHBEP58166 350 aa20.71■□□□□ 0.91
PDE6D-205ENST00000486044 TXNRD3Q86VQ6 643 aa20.71■□□□□ 0.91
PDE6D-205ENST00000486044 ITGA6P23229 1130 aa20.7■□□□□ 0.9
PDE6D-205ENST00000486044 GTF2IP78347 998 aa20.7■□□□□ 0.9
PDE6D-205ENST00000486044 PRKG1Q13976 671 aa20.7■□□□□ 0.9
PDE6D-205ENST00000486044 LDLRAD1Q5T700 205 aa20.7■□□□□ 0.9
PDE6D-205ENST00000486044 ANGEL1Q9UNK9 670 aaKnown RBP20.7■□□□□ 0.9
PDE6D-205ENST00000486044 SPRYD7Q5W111 196 aa20.69■□□□□ 0.9
PDE6D-205ENST00000486044 PLA2G12BQ9BX93 195 aa20.69■□□□□ 0.9
PDE6D-205ENST00000486044 MYH16Q9H6N6 1097 aa20.69■□□□□ 0.9
PDE6D-205ENST00000486044 MANSC4A6NHS7 340 aaPredicted RBP20.68■□□□□ 0.9
PDE6D-205ENST00000486044 SLC4A2P04920 1241 aa20.68■□□□□ 0.9
PDE6D-205ENST00000486044 GCKRQ14397 625 aa20.68■□□□□ 0.9
PDE6D-205ENST00000486044 DLGAP5Q15398 846 aa20.68■□□□□ 0.9
PDE6D-205ENST00000486044 SLC10A4Q96EP9 437 aa20.68■□□□□ 0.9
PDE6D-205ENST00000486044 COL1A1P02452 1464 aaPredicted RBP20.68■□□□□ 0.9
PDE6D-205ENST00000486044 PPP1R12BO60237 982 aaPredicted RBP20.67■□□□□ 0.9
PDE6D-205ENST00000486044 TWISTNBQ3B726 338 aaPredicted RBP20.67■□□□□ 0.9
PDE6D-205ENST00000486044 ZBED3Q96IU2 234 aaPredicted RBP20.67■□□□□ 0.9
PDE6D-205ENST00000486044 DEFB129Q9H1M3 183 aa20.67■□□□□ 0.9
PDE6D-205ENST00000486044 CD209Q9NNX6 404 aa20.67■□□□□ 0.9
PDE6D-205ENST00000486044 ZNF646O15015 1829 aaPredicted RBP20.67■□□□□ 0.9
PDE6D-205ENST00000486044 MYO1BO43795 1136 aa20.66■□□□□ 0.9
PDE6D-205ENST00000486044 CSF1RP07333 972 aa20.66■□□□□ 0.9
PDE6D-205ENST00000486044 KLRK1P26718 216 aa20.66■□□□□ 0.9
PDE6D-205ENST00000486044 TSR2Q969E8 191 aaKnown RBP20.66■□□□□ 0.9
PDE6D-205ENST00000486044 PPP2R3BQ9Y5P8 575 aa20.66■□□□□ 0.9
PDE6D-205ENST00000486044 ANKRD18BA2A2Z9 1011 aa20.65■□□□□ 0.9
PDE6D-205ENST00000486044 UNCXA6NJT0 531 aa20.65■□□□□ 0.9
PDE6D-205ENST00000486044 CHRNDQ07001 517 aa20.65■□□□□ 0.9
PDE6D-205ENST00000486044 SUPT20HL1Q3ZLR7 823 aa20.65■□□□□ 0.9
PDE6D-205ENST00000486044 MTMR14Q8NCE2 650 aa20.65■□□□□ 0.9
PDE6D-205ENST00000486044 ZBTB48P10074 688 aaPredicted RBP20.64■□□□□ 0.89
PDE6D-205ENST00000486044 MAP3K11Q16584 847 aa20.64■□□□□ 0.89
PDE6D-205ENST00000486044 G2E3Q7L622 706 aa20.64■□□□□ 0.89
PDE6D-205ENST00000486044 IFNL1Q8IU54 200 aa20.64■□□□□ 0.89
PDE6D-205ENST00000486044 LINS1Q8NG48 757 aa20.64■□□□□ 0.89
PDE6D-205ENST00000486044 FKBP5Q13451 457 aaPredicted RBP20.63■□□□□ 0.89
PDE6D-205ENST00000486044 CCDC27Q2M243 656 aa20.63■□□□□ 0.89
PDE6D-205ENST00000486044 INTS3Q68E01 1043 aaKnown RBP20.63■□□□□ 0.89
PDE6D-205ENST00000486044 C15orf52Q6ZUT6 534 aaKnown RBP20.63■□□□□ 0.89
PDE6D-205ENST00000486044 R3HDMLQ9H3Y0 253 aa20.63■□□□□ 0.89
PDE6D-205ENST00000486044 FLIIQ13045 1269 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms