RNA–Protein interactions for RNA: ENST00000484958.5

FXR1-219, Transcript of FMR1 autosomal homolog 1, human

TSL 3

Gene FXR1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-219	ENST00000484958	SUV39H2	Q9H5I1	410 aa		10.13	□□□□□ -0.79
FXR1-219	ENST00000484958	NAGPA	Q9UK23	515 aa		10.13	□□□□□ -0.79
FXR1-219	ENST00000484958	PDE2A	O00408	941 aa	Predicted RBP	10.12	□□□□□ -0.79
FXR1-219	ENST00000484958	C20orf204	Q6ZNR8	217 aa		10.12	□□□□□ -0.79
FXR1-219	ENST00000484958	DCAF11	Q8TEB1	546 aa		10.12	□□□□□ -0.79
FXR1-219	ENST00000484958	GIPC2	Q8TF65	315 aa		10.12	□□□□□ -0.79
FXR1-219	ENST00000484958	NUDT8	Q8WV74	236 aa		10.12	□□□□□ -0.79
FXR1-219	ENST00000484958	RASSF4	Q9H2L5	321 aa		10.12	□□□□□ -0.79
FXR1-219	ENST00000484958	LIN7B	Q9HAP6	207 aa		10.12	□□□□□ -0.79
FXR1-219	ENST00000484958	MKL2	Q9ULH7	1088 aa		10.12	□□□□□ -0.79
FXR1-219	ENST00000484958	STARD13	Q9Y3M8	1113 aa		10.12	□□□□□ -0.79
FXR1-219	ENST00000484958		A0A1W2PP55	124 aa		10.11	□□□□□ -0.79
FXR1-219	ENST00000484958	RBM47	A0AV96	593 aa	Known RBP	10.11	□□□□□ -0.79
FXR1-219	ENST00000484958	ARHGEF15	O94989	841 aa		10.11	□□□□□ -0.79
FXR1-219	ENST00000484958	ALB	P02768	609 aa		10.11	□□□□□ -0.79
FXR1-219	ENST00000484958	XRCC5	P13010	732 aa	Known RBP	10.11	□□□□□ -0.79
FXR1-219	ENST00000484958	GNA15	P30679	374 aa		10.11	□□□□□ -0.79
FXR1-219	ENST00000484958	CABP4	P57796	275 aa		10.11	□□□□□ -0.79
FXR1-219	ENST00000484958	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
FXR1-219	ENST00000484958	BEND7	Q8N7W2	519 aa	Predicted RBP	10.11	□□□□□ -0.79
FXR1-219	ENST00000484958	ZKSCAN3	Q9BRR0	538 aa		10.11	□□□□□ -0.79
FXR1-219	ENST00000484958	MRS2	Q9HD23	443 aa		10.11	□□□□□ -0.79
FXR1-219	ENST00000484958	PEAR1	Q5VY43	1037 aa	Predicted RBP	10.1	□□□□□ -0.79
FXR1-219	ENST00000484958	EPS8L3	Q8TE67	593 aa	Known RBP	10.1	□□□□□ -0.79
FXR1-219	ENST00000484958	BHLHE41	Q9C0J9	482 aa	Predicted RBP	10.1	□□□□□ -0.79
FXR1-219	ENST00000484958	DGKG	P49619	791 aa		10.09	□□□□□ -0.79
FXR1-219	ENST00000484958	WFDC8	Q8IUA0	241 aa		10.09	□□□□□ -0.79
FXR1-219	ENST00000484958	NXPE3	Q969Y0	559 aa		10.09	□□□□□ -0.79
FXR1-219	ENST00000484958	SCARF2	Q96GP6	870 aa	Predicted RBP	10.09	□□□□□ -0.79
FXR1-219	ENST00000484958	DUSP9	Q99956	384 aa	Known RBP	10.09	□□□□□ -0.79
FXR1-219	ENST00000484958	SRA1	Q9HD15	236 aa	Known RBP	10.09	□□□□□ -0.79
FXR1-219	ENST00000484958	NOP53	Q9NZM5	478 aa	Known RBP	10.09	□□□□□ -0.79
FXR1-219	ENST00000484958	GNB5	O14775	395 aa		10.08	□□□□□ -0.8
FXR1-219	ENST00000484958	ATP11A	P98196	1134 aa		10.08	□□□□□ -0.8
FXR1-219	ENST00000484958	PTPN12	Q05209	780 aa	Known RBP	10.08	□□□□□ -0.8
FXR1-219	ENST00000484958	PSMD2	Q13200	908 aa		10.08	□□□□□ -0.8
FXR1-219	ENST00000484958	PRPF40B	Q6NWY9	871 aa	Known RBP	10.08	□□□□□ -0.8
FXR1-219	ENST00000484958	FAM117B	Q6P1L5	589 aa		10.08	□□□□□ -0.8
FXR1-219	ENST00000484958	CCNJL	Q8IV13	435 aa		10.08	□□□□□ -0.8
FXR1-219	ENST00000484958	BSND	Q8WZ55	320 aa		10.08	□□□□□ -0.8
FXR1-219	ENST00000484958	PARP2	Q9UGN5	583 aa		10.08	□□□□□ -0.8
FXR1-219	ENST00000484958	WWC3	Q9ULE0	1092 aa		10.08	□□□□□ -0.8
FXR1-219	ENST00000484958	EIF4B	P23588	611 aa	Known RBP	10.07	□□□□□ -0.8
FXR1-219	ENST00000484958	CDC27	P30260	824 aa		10.07	□□□□□ -0.8
FXR1-219	ENST00000484958	AFF1	P51825	1210 aa	Known RBP	10.07	□□□□□ -0.8
FXR1-219	ENST00000484958	GDF6	Q6KF10	455 aa	Predicted RBP	10.07	□□□□□ -0.8
FXR1-219	ENST00000484958	MAP4K3	Q8IVH8	894 aa		10.07	□□□□□ -0.8
FXR1-219	ENST00000484958	POP1	Q99575	1024 aa	Known RBP	10.07	□□□□□ -0.8
FXR1-219	ENST00000484958	BCO2	Q9BYV7	579 aa		10.07	□□□□□ -0.8
FXR1-219	ENST00000484958	ADAM19	Q9H013	955 aa		10.07	□□□□□ -0.8
FXR1-219	ENST00000484958	LATS2	Q9NRM7	1088 aa		10.07	□□□□□ -0.8
FXR1-219	ENST00000484958	FAM8A1	Q9UBU6	413 aa		10.07	□□□□□ -0.8
FXR1-219	ENST00000484958	NFKBIE	O00221	500 aa		10.06	□□□□□ -0.8
FXR1-219	ENST00000484958	ZNF16	P17020	682 aa	Predicted RBP	10.06	□□□□□ -0.8
FXR1-219	ENST00000484958	GSTT1	P30711	240 aa		10.06	□□□□□ -0.8
FXR1-219	ENST00000484958	TMC4	Q7Z404	712 aa		10.06	□□□□□ -0.8
FXR1-219	ENST00000484958	DTWD1	Q8N5C7	304 aa		10.06	□□□□□ -0.8
FXR1-219	ENST00000484958	ASAP3	Q8TDY4	903 aa		10.06	□□□□□ -0.8
FXR1-219	ENST00000484958	AK5	Q9Y6K8	562 aa		10.06	□□□□□ -0.8
FXR1-219	ENST00000484958	SORBS3	O60504	671 aa		10.05	□□□□□ -0.8
FXR1-219	ENST00000484958	IRS1	P35568	1242 aa		10.05	□□□□□ -0.8
FXR1-219	ENST00000484958	DAB2	P98082	770 aa		10.05	□□□□□ -0.8
FXR1-219	ENST00000484958	GRM2	Q14416	872 aa		10.05	□□□□□ -0.8
FXR1-219	ENST00000484958	MSL1	Q68DK7	614 aa		10.05	□□□□□ -0.8
FXR1-219	ENST00000484958	IL22RA1	Q8N6P7	574 aa		10.05	□□□□□ -0.8
FXR1-219	ENST00000484958	DDX54	Q8TDD1	881 aa	Known RBP	10.05	□□□□□ -0.8
FXR1-219	ENST00000484958	C12orf49	Q9H741	205 aa		10.05	□□□□□ -0.8
FXR1-219	ENST00000484958	ADAMTS8	Q9UP79	889 aa		10.05	□□□□□ -0.8
FXR1-219	ENST00000484958	PPME1	Q9Y570	386 aa		10.05	□□□□□ -0.8
FXR1-219	ENST00000484958	TMEM238L	A0A1B0GVL6	79 aa		10.04	□□□□□ -0.8
FXR1-219	ENST00000484958	RNF225	M0QZC1	329 aa	Predicted RBP	10.04	□□□□□ -0.8
FXR1-219	ENST00000484958	ARL4D	P49703	201 aa		10.04	□□□□□ -0.8
FXR1-219	ENST00000484958	RAC1	P63000	192 aa		10.04	□□□□□ -0.8
FXR1-219	ENST00000484958	WNT8B	Q93098	351 aa		10.04	□□□□□ -0.8
FXR1-219	ENST00000484958	TCF12	Q99081	682 aa		10.04	□□□□□ -0.8
FXR1-219	ENST00000484958	LACRT	Q9GZZ8	138 aa		10.04	□□□□□ -0.8
FXR1-219	ENST00000484958	STK17A	Q9UEE5	414 aa		10.04	□□□□□ -0.8
FXR1-219	ENST00000484958	TRIM33	Q9UPN9	1127 aa		10.04	□□□□□ -0.8
FXR1-219	ENST00000484958	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	10.04	□□□□□ -0.8
FXR1-219	ENST00000484958		A0A096LPE4	126 aa		10.03	□□□□□ -0.8
FXR1-219	ENST00000484958		A0A1W2PPZ6	126 aa		10.03	□□□□□ -0.8
FXR1-219	ENST00000484958	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	10.03	□□□□□ -0.8
FXR1-219	ENST00000484958	TRAPPC3L	Q5T215	181 aa		10.03	□□□□□ -0.8
FXR1-219	ENST00000484958	DTHD1	Q6ZMT9	781 aa		10.03	□□□□□ -0.8
FXR1-219	ENST00000484958	ALYREF	Q86V81	257 aa	Known RBP	10.03	□□□□□ -0.8
FXR1-219	ENST00000484958	NID1	P14543	1247 aa		10.02	□□□□□ -0.81
FXR1-219	ENST00000484958	ACPP	P15309	386 aa		10.02	□□□□□ -0.81
FXR1-219	ENST00000484958	LOR	P23490	312 aa	Predicted RBP	10.02	□□□□□ -0.81
FXR1-219	ENST00000484958	ITPKA	P23677	461 aa		10.02	□□□□□ -0.81
FXR1-219	ENST00000484958	GRIK5	Q16478	980 aa		10.02	□□□□□ -0.81
FXR1-219	ENST00000484958	PRRT3	Q5FWE3	981 aa		10.02	□□□□□ -0.81
FXR1-219	ENST00000484958	NXPE4	Q6UWF7	544 aa		10.02	□□□□□ -0.81
FXR1-219	ENST00000484958	SETDB2	Q96T68	719 aa		10.02	□□□□□ -0.81
FXR1-219	ENST00000484958	PPM1H	Q9ULR3	514 aa		10.02	□□□□□ -0.81
FXR1-219	ENST00000484958		H3BRJ5	948 aa		10.01	□□□□□ -0.81
FXR1-219	ENST00000484958	TRPA1	O75762	1119 aa		10.01	□□□□□ -0.81
FXR1-219	ENST00000484958	PI16	Q6UXB8	463 aa		10.01	□□□□□ -0.81
FXR1-219	ENST00000484958	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.01	□□□□□ -0.81
FXR1-219	ENST00000484958	CLEC4M	Q9H2X3	399 aa	Predicted RBP	10.01	□□□□□ -0.81
FXR1-219	ENST00000484958	ABCB6	Q9NP58	842 aa		10.01	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms