RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 PLIN1O60240 522 aa19.8■□□□□ 0.76
UPF3A-208ENST00000484246 PDE8BO95263 885 aa19.8■□□□□ 0.76
UPF3A-208ENST00000484246 KLRK1P26718 216 aa19.8■□□□□ 0.76
UPF3A-208ENST00000484246 METTL24Q5JXM2 366 aa19.8■□□□□ 0.76
UPF3A-208ENST00000484246 ATG9AQ7Z3C6 839 aa19.8■□□□□ 0.76
UPF3A-208ENST00000484246 TXNRD3Q86VQ6 643 aa19.8■□□□□ 0.76
UPF3A-208ENST00000484246 HELBQ8NG08 1087 aaPredicted RBP19.8■□□□□ 0.76
UPF3A-208ENST00000484246 RBM46Q8TBY0 533 aaKnown RBP19.8■□□□□ 0.76
UPF3A-208ENST00000484246 TAF1DQ9H5J8 278 aaPredicted RBP19.8■□□□□ 0.76
UPF3A-208ENST00000484246 HACL1Q9UJ83 578 aa19.8■□□□□ 0.76
UPF3A-208ENST00000484246 RAD17O75943 681 aa19.79■□□□□ 0.76
UPF3A-208ENST00000484246 VIL1P09327 827 aaKnown RBP19.79■□□□□ 0.76
UPF3A-208ENST00000484246 RPS12P25398 132 aaKnown RBP19.79■□□□□ 0.76
UPF3A-208ENST00000484246 CHMP4BQ9H444 224 aaKnown RBP19.79■□□□□ 0.76
UPF3A-208ENST00000484246 GJA3Q9Y6H8 435 aa19.79■□□□□ 0.76
UPF3A-208ENST00000484246 SCN4AP35499 1836 aa19.79■□□□□ 0.76
UPF3A-208ENST00000484246 SNAP23O00161 211 aa19.78■□□□□ 0.76
UPF3A-208ENST00000484246 PSMD14O00487 310 aa19.78■□□□□ 0.76
UPF3A-208ENST00000484246 FGFR2P21802 821 aa19.78■□□□□ 0.76
UPF3A-208ENST00000484246 IL15P40933 162 aaPredicted RBP19.78■□□□□ 0.76
UPF3A-208ENST00000484246 POLA2Q14181 598 aa19.78■□□□□ 0.76
UPF3A-208ENST00000484246 SSH3Q8TE77 659 aa19.78■□□□□ 0.76
UPF3A-208ENST00000484246 DPF2Q92785 391 aa19.78■□□□□ 0.76
UPF3A-208ENST00000484246 GPRC5DQ9NZD1 345 aa19.78■□□□□ 0.76
UPF3A-208ENST00000484246 PNMA6EA0A0J9YXQ4 647 aa19.77■□□□□ 0.76
UPF3A-208ENST00000484246 G3V3G9 751 aa19.77■□□□□ 0.76
UPF3A-208ENST00000484246 GMPSP49915 693 aaPredicted RBP19.77■□□□□ 0.76
UPF3A-208ENST00000484246 PUM3Q15397 648 aaKnown RBP19.77■□□□□ 0.76
UPF3A-208ENST00000484246 DCAF8Q5TAQ9 597 aa19.77■□□□□ 0.76
UPF3A-208ENST00000484246 C16orf71Q8IYS4 520 aaPredicted RBP19.77■□□□□ 0.76
UPF3A-208ENST00000484246 ZBTB40Q9NUA8 1239 aa19.77■□□□□ 0.76
UPF3A-208ENST00000484246 COG6Q9Y2V7 657 aa19.77■□□□□ 0.76
UPF3A-208ENST00000484246 IL1R1P14778 569 aa19.76■□□□□ 0.75
UPF3A-208ENST00000484246 LMOD1P29536 600 aaPredicted RBP19.76■□□□□ 0.75
UPF3A-208ENST00000484246 EPHX2P34913 555 aa19.76■□□□□ 0.75
UPF3A-208ENST00000484246 RRP1P56182 461 aaKnown RBP19.76■□□□□ 0.75
UPF3A-208ENST00000484246 ATP8B2P98198 1209 aa19.76■□□□□ 0.75
UPF3A-208ENST00000484246 ZNF804AQ7Z570 1209 aa19.76■□□□□ 0.75
UPF3A-208ENST00000484246 CD209Q9NNX6 404 aa19.76■□□□□ 0.75
UPF3A-208ENST00000484246 PA2G4Q9UQ80 394 aaKnown RBP19.76■□□□□ 0.75
UPF3A-208ENST00000484246 USP17L3A6NCW0 530 aa19.75■□□□□ 0.75
UPF3A-208ENST00000484246 USP17L4A6NCW7 530 aa19.75■□□□□ 0.75
UPF3A-208ENST00000484246 FSTL1Q12841 308 aa19.75■□□□□ 0.75
UPF3A-208ENST00000484246 C20orf194Q5TEA3 1177 aa19.75■□□□□ 0.75
UPF3A-208ENST00000484246 STRIP1Q5VSL9 837 aa19.75■□□□□ 0.75
UPF3A-208ENST00000484246 CEP85Q6P2H3 762 aa19.75■□□□□ 0.75
UPF3A-208ENST00000484246 USP17L1Q7RTZ2 530 aa19.75■□□□□ 0.75
UPF3A-208ENST00000484246 PNMA8AQ86V59 439 aaPredicted RBP19.75■□□□□ 0.75
UPF3A-208ENST00000484246 KCNQ5Q9NR82 932 aa19.75■□□□□ 0.75
UPF3A-208ENST00000484246 ADAMTSL1Q8N6G6 1762 aa19.75■□□□□ 0.75
UPF3A-208ENST00000484246 ZBTB22O15209 634 aa19.74■□□□□ 0.75
UPF3A-208ENST00000484246 DACT2Q5SW24 774 aa19.74■□□□□ 0.75
UPF3A-208ENST00000484246 RSBN1LQ6PCB5 846 aaPredicted RBP19.74■□□□□ 0.75
UPF3A-208ENST00000484246 LDHDQ86WU2 507 aa19.74■□□□□ 0.75
UPF3A-208ENST00000484246 AGBL3Q8NEM8 1001 aa19.74■□□□□ 0.75
UPF3A-208ENST00000484246 LPIN2Q92539 896 aa19.74■□□□□ 0.75
UPF3A-208ENST00000484246 GMLQ99445 158 aa19.74■□□□□ 0.75
UPF3A-208ENST00000484246 SIL1Q9H173 461 aa19.74■□□□□ 0.75
UPF3A-208ENST00000484246 C1orf115Q9H7X2 142 aa19.74■□□□□ 0.75
UPF3A-208ENST00000484246 ADARB2Q9NS39 739 aaKnown RBP19.74■□□□□ 0.75
UPF3A-208ENST00000484246 MYO3BQ8WXR4 1341 aa19.74■□□□□ 0.75
UPF3A-208ENST00000484246 SCN9AQ15858 1988 aa19.74■□□□□ 0.75
UPF3A-208ENST00000484246 EPS15P42566 896 aa19.73■□□□□ 0.75
UPF3A-208ENST00000484246 USP50Q70EL3 339 aaPredicted RBP19.73■□□□□ 0.75
UPF3A-208ENST00000484246 FBXO33Q7Z6M2 555 aa19.73■□□□□ 0.75
UPF3A-208ENST00000484246 SMC1BQ8NDV3 1235 aa19.73■□□□□ 0.75
UPF3A-208ENST00000484246 FAM84BQ96KN1 310 aaPredicted RBP19.73■□□□□ 0.75
UPF3A-208ENST00000484246 CEP126Q9P2H0 1117 aa19.73■□□□□ 0.75
UPF3A-208ENST00000484246 PSME4Q14997 1843 aa19.72■□□□□ 0.75
UPF3A-208ENST00000484246 IFIT1P09914 478 aaKnown RBP19.72■□□□□ 0.75
UPF3A-208ENST00000484246 MMP14P50281 582 aa19.72■□□□□ 0.75
UPF3A-208ENST00000484246 FKBP1AP62942 108 aaKnown RBP19.72■□□□□ 0.75
UPF3A-208ENST00000484246 TDRD7Q8NHU6 1098 aaKnown RBP19.72■□□□□ 0.75
UPF3A-208ENST00000484246 NOP58Q9Y2X3 529 aaKnown RBP19.72■□□□□ 0.75
UPF3A-208ENST00000484246 ZBTB12Q9Y330 459 aaPredicted RBP19.72■□□□□ 0.75
UPF3A-208ENST00000484246 SLC5A1P13866 664 aa19.71■□□□□ 0.75
UPF3A-208ENST00000484246 HIBADHP31937 336 aaKnown RBP19.71■□□□□ 0.75
UPF3A-208ENST00000484246 ZNF280AP59817 542 aaPredicted RBP19.71■□□□□ 0.75
UPF3A-208ENST00000484246 ZNF646O15015 1829 aaPredicted RBP19.71■□□□□ 0.75
UPF3A-208ENST00000484246 FAM205AQ6ZU69 1335 aa19.71■□□□□ 0.75
UPF3A-208ENST00000484246 ATP2B3Q16720 1220 aa19.7■□□□□ 0.74
UPF3A-208ENST00000484246 RPAP2Q8IXW5 612 aaPredicted RBP19.7■□□□□ 0.74
UPF3A-208ENST00000484246 MICALL2Q8IY33 904 aa19.7■□□□□ 0.74
UPF3A-208ENST00000484246 CNOT7Q9UIV1 285 aaKnown RBP19.7■□□□□ 0.74
UPF3A-208ENST00000484246 H7C1D1 291 aa19.69■□□□□ 0.74
UPF3A-208ENST00000484246 SASH1O94885 1247 aa19.69■□□□□ 0.74
UPF3A-208ENST00000484246 POTEIP0CG38 1075 aa19.69■□□□□ 0.74
UPF3A-208ENST00000484246 POTEJP0CG39 1038 aa19.69■□□□□ 0.74
UPF3A-208ENST00000484246 GYG1P46976 350 aa19.69■□□□□ 0.74
UPF3A-208ENST00000484246 CAVIN4Q5BKX8 364 aa19.69■□□□□ 0.74
UPF3A-208ENST00000484246 TTLL5Q6EMB2 1281 aa19.69■□□□□ 0.74
UPF3A-208ENST00000484246 CHADLQ6NUI6 762 aa19.69■□□□□ 0.74
UPF3A-208ENST00000484246 GTF2IP78347 998 aa19.68■□□□□ 0.74
UPF3A-208ENST00000484246 ZC3H15Q8WU90 426 aaKnown RBP19.68■□□□□ 0.74
UPF3A-208ENST00000484246 PGAP2Q9UHJ9 254 aa19.68■□□□□ 0.74
UPF3A-208ENST00000484246 AKAP2Q9Y2D5 859 aa19.68■□□□□ 0.74
UPF3A-208ENST00000484246 G3BP1Q13283 466 aaKnown RBP eCLIP19.67■□□□□ 0.74
UPF3A-208ENST00000484246 GPR108Q9NPR9 543 aa19.67■□□□□ 0.74
UPF3A-208ENST00000484246 SHTN1A0MZ66 631 aa19.66■□□□□ 0.74
UPF3A-208ENST00000484246 HMMRO75330 724 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms