RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 SSFA2P28290 1259 aa11.53□□□□□ -0.56
UFD1-208ENST00000484101 DEKP35659 375 aaKnown RBP11.53□□□□□ -0.56
UFD1-208ENST00000484101 ITPK1Q13572 414 aa11.53□□□□□ -0.56
UFD1-208ENST00000484101 ATP2B3Q16720 1220 aa11.53□□□□□ -0.56
UFD1-208ENST00000484101 CCDC152Q4G0S7 254 aa11.53□□□□□ -0.56
UFD1-208ENST00000484101 LRRC24Q50LG9 513 aa11.53□□□□□ -0.56
UFD1-208ENST00000484101 METTL24Q5JXM2 366 aa11.53□□□□□ -0.56
UFD1-208ENST00000484101 TTC39AQ5SRH9 613 aa11.53□□□□□ -0.56
UFD1-208ENST00000484101 ZSCAN25Q6NSZ9 544 aa11.53□□□□□ -0.56
UFD1-208ENST00000484101 LDHAL6AQ6ZMR3 332 aa11.53□□□□□ -0.56
UFD1-208ENST00000484101 TNPO1Q92973 898 aaKnown RBP11.53□□□□□ -0.56
UFD1-208ENST00000484101 CHMP4CQ96CF2 233 aa11.53□□□□□ -0.56
UFD1-208ENST00000484101 FAM227BQ96M60 508 aa11.53□□□□□ -0.56
UFD1-208ENST00000484101 TTC14Q96N46 770 aa11.53□□□□□ -0.56
UFD1-208ENST00000484101 DSCC1Q9BVC3 393 aa11.53□□□□□ -0.56
UFD1-208ENST00000484101 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.53□□□□□ -0.562e-8■■□□□ 14.4
UFD1-208ENST00000484101 ZSWIM6Q9HCJ5 1215 aa11.53□□□□□ -0.56
UFD1-208ENST00000484101 ISY1Q9ULR0 285 aaKnown RBP11.53□□□□□ -0.56
UFD1-208ENST00000484101 LIMCH1Q9UPQ0 1083 aa11.53□□□□□ -0.56
UFD1-208ENST00000484101 TBC1D2BQ9UPU7 963 aa11.53□□□□□ -0.56
UFD1-208ENST00000484101 RIPOR2Q9Y4F9 1068 aa11.53□□□□□ -0.56
UFD1-208ENST00000484101 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.53□□□□□ -0.56
UFD1-208ENST00000484101 A0A1B0GUL6 1792 aa11.53□□□□□ -0.56
UFD1-208ENST00000484101 AKAP11Q9UKA4 1901 aa11.52□□□□□ -0.56
UFD1-208ENST00000484101 DOCK2Q92608 1830 aa11.52□□□□□ -0.57
UFD1-208ENST00000484101 TAF5LO75529 589 aa11.52□□□□□ -0.57
UFD1-208ENST00000484101 HMGB1P09429 215 aaKnown RBP11.52□□□□□ -0.57
UFD1-208ENST00000484101 POLD1P28340 1107 aa11.52□□□□□ -0.57
UFD1-208ENST00000484101 HTRA3P83110 453 aa11.52□□□□□ -0.57
UFD1-208ENST00000484101 PUM3Q15397 648 aaKnown RBP11.52□□□□□ -0.57
UFD1-208ENST00000484101 CREB3L3Q68CJ9 461 aa11.52□□□□□ -0.57
UFD1-208ENST00000484101 PRPF40BQ6NWY9 871 aaKnown RBP11.52□□□□□ -0.57
UFD1-208ENST00000484101 RUFY3Q7L099 469 aa11.52□□□□□ -0.57
UFD1-208ENST00000484101 XAGE2Q96GT9 111 aa11.52□□□□□ -0.57
UFD1-208ENST00000484101 CDC5LQ99459 802 aaKnown RBP11.52□□□□□ -0.57
UFD1-208ENST00000484101 NYXQ9GZU5 481 aa11.52□□□□□ -0.57
UFD1-208ENST00000484101 CNNM1Q9NRU3 951 aa11.52□□□□□ -0.57
UFD1-208ENST00000484101 SLC27A2O14975 620 aa11.51□□□□□ -0.57
UFD1-208ENST00000484101 RNF113AO15541 343 aaKnown RBP11.51□□□□□ -0.57
UFD1-208ENST00000484101 TOMM70O94826 608 aa11.51□□□□□ -0.57
UFD1-208ENST00000484101 NTSR2O95665 410 aa11.51□□□□□ -0.57
UFD1-208ENST00000484101 CASTP20810 708 aaKnown RBP11.51□□□□□ -0.57
UFD1-208ENST00000484101 PTH1RQ03431 593 aa11.51□□□□□ -0.57
UFD1-208ENST00000484101 ZNF827Q17R98 1081 aa11.51□□□□□ -0.57
UFD1-208ENST00000484101 ZMYM1Q5SVZ6 1142 aa11.51□□□□□ -0.57
UFD1-208ENST00000484101 VGLL2Q8N8G2 317 aa11.51□□□□□ -0.57
UFD1-208ENST00000484101 LPIN2Q92539 896 aa11.51□□□□□ -0.57
UFD1-208ENST00000484101 ZNF594Q96JF6 807 aaPredicted RBP11.51□□□□□ -0.57
UFD1-208ENST00000484101 JAKMIP1Q96N16 626 aaKnown RBP11.51□□□□□ -0.57
UFD1-208ENST00000484101 GREM2Q9H772 168 aa11.51□□□□□ -0.57
UFD1-208ENST00000484101 PDRG1Q9NUG6 133 aa11.51□□□□□ -0.57
UFD1-208ENST00000484101 C4AP0C0L4 1744 aa11.5□□□□□ -0.57
UFD1-208ENST00000484101 C4BP0C0L5 1744 aa11.5□□□□□ -0.57
UFD1-208ENST00000484101 GOLIM4O00461 696 aa11.5□□□□□ -0.57
UFD1-208ENST00000484101 PDE8BO95263 885 aa11.5□□□□□ -0.57
UFD1-208ENST00000484101 SLC5A1P13866 664 aa11.5□□□□□ -0.57
UFD1-208ENST00000484101 IGHMBP2P38935 993 aaKnown RBP11.5□□□□□ -0.57
UFD1-208ENST00000484101 BLOC1S2Q6QNY1 142 aa11.5□□□□□ -0.57
UFD1-208ENST00000484101 SLC16A10Q8TF71 515 aa11.5□□□□□ -0.57
UFD1-208ENST00000484101 MPHOSPH8Q99549 860 aa11.5□□□□□ -0.57
UFD1-208ENST00000484101 PUS3Q9BZE2 481 aaKnown RBP11.5□□□□□ -0.57
UFD1-208ENST00000484101 UPF3BQ9BZI7 483 aaKnown RBP11.5□□□□□ -0.57
UFD1-208ENST00000484101 CTNNA3Q9UI47 895 aa11.5□□□□□ -0.57
UFD1-208ENST00000484101 NIP7Q9Y221 180 aaKnown RBP eCLIP11.5□□□□□ -0.57
UFD1-208ENST00000484101 PCNTO95613 3336 aa11.5□□□□□ -0.57
UFD1-208ENST00000484101 LAMA4Q16363 1823 aa11.5□□□□□ -0.57
UFD1-208ENST00000484101 WDR33Q9C0J8 1336 aaKnown RBP11.5□□□□□ -0.57
UFD1-208ENST00000484101 RPS6KA4O75676 772 aa11.49□□□□□ -0.57
UFD1-208ENST00000484101 ARID4AP29374 1257 aaPredicted RBP11.49□□□□□ -0.57
UFD1-208ENST00000484101 TIMM10P62072 90 aa11.49□□□□□ -0.57
UFD1-208ENST00000484101 SUSD4Q5VX71 490 aa11.49□□□□□ -0.57
UFD1-208ENST00000484101 DDX46Q7L014 1031 aaKnown RBP11.49□□□□□ -0.57
UFD1-208ENST00000484101 RASEFQ8IZ41 740 aa11.49□□□□□ -0.57
UFD1-208ENST00000484101 ATP6V1DQ9Y5K8 247 aa11.49□□□□□ -0.57
UFD1-208ENST00000484101 TRAK2O60296 914 aa11.48□□□□□ -0.57
UFD1-208ENST00000484101 IGSF3O75054 1194 aa11.48□□□□□ -0.57
UFD1-208ENST00000484101 BRD1O95696 1058 aa11.48□□□□□ -0.57
UFD1-208ENST00000484101 AK2P54819 239 aa11.48□□□□□ -0.57
UFD1-208ENST00000484101 L1TD1Q5T7N2 865 aaKnown RBP11.48□□□□□ -0.57
UFD1-208ENST00000484101 TMED8Q6PL24 325 aaPredicted RBP11.48□□□□□ -0.57
UFD1-208ENST00000484101 ZNF589Q86UQ0 364 aaPredicted RBP11.48□□□□□ -0.57
UFD1-208ENST00000484101 LINC00116Q8NCU8 138 aa11.48□□□□□ -0.57
UFD1-208ENST00000484101 APPBP2Q92624 585 aa11.48□□□□□ -0.57
UFD1-208ENST00000484101 NARFQ9UHQ1 456 aa11.48□□□□□ -0.57
UFD1-208ENST00000484101 QSER1Q2KHR3 1735 aa11.48□□□□□ -0.57
UFD1-208ENST00000484101 CARMIL3Q8ND23 1372 aa11.47□□□□□ -0.57
UFD1-208ENST00000484101 ZBTB22O15209 634 aa11.47□□□□□ -0.57
UFD1-208ENST00000484101 BAG4O95429 457 aaKnown RBP11.47□□□□□ -0.57
UFD1-208ENST00000484101 PDCP20941 246 aa11.47□□□□□ -0.57
UFD1-208ENST00000484101 FGFR2P21802 821 aa11.47□□□□□ -0.57
UFD1-208ENST00000484101 RPS6KB1P23443 525 aa11.47□□□□□ -0.57
UFD1-208ENST00000484101 SF3B3Q15393 1217 aaKnown RBP11.47□□□□□ -0.57
UFD1-208ENST00000484101 SLC10A5Q5PT55 438 aa11.47□□□□□ -0.57
UFD1-208ENST00000484101 FOXD4L1Q9NU39 408 aa11.47□□□□□ -0.57
UFD1-208ENST00000484101 MAST3O60307 1309 aa11.46□□□□□ -0.57
UFD1-208ENST00000484101 ZMYM6O95789 1325 aa11.46□□□□□ -0.57
UFD1-208ENST00000484101 ZPR1O75312 459 aa11.46□□□□□ -0.57
UFD1-208ENST00000484101 UBE3CQ15386 1083 aa11.46□□□□□ -0.57
UFD1-208ENST00000484101 ZGPATQ8N5A5 531 aaKnown RBP11.46□□□□□ -0.57
UFD1-208ENST00000484101 CCNL1Q9UK58 526 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms