RNA–Protein interactions for RNA: ENST00000484049.6

CCNC-205, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-205ENST00000484049 FAM89AQ96GI7 184 aa12.99□□□□□ -0.33
CCNC-205ENST00000484049 ISCA1Q9BUE6 129 aa12.99□□□□□ -0.33
CCNC-205ENST00000484049 HPS5Q9UPZ3 1129 aa12.99□□□□□ -0.33
CCNC-205ENST00000484049 CENPFP49454 3210 aa12.99□□□□□ -0.33
CCNC-205ENST00000484049 C6orf229H3BNL8 230 aa12.98□□□□□ -0.33
CCNC-205ENST00000484049 MOB2Q70IA6 237 aa12.98□□□□□ -0.33
CCNC-205ENST00000484049 SCAF8Q9UPN6 1271 aaKnown RBP12.98□□□□□ -0.33
CCNC-205ENST00000484049 ATP5J2-PTCD1G3V325 749 aa12.96□□□□□ -0.33
CCNC-205ENST00000484049 ZNF280AP59817 542 aaPredicted RBP12.96□□□□□ -0.33
CCNC-205ENST00000484049 IRX5P78411 483 aaPredicted RBP12.96□□□□□ -0.33
CCNC-205ENST00000484049 SCARF1Q14162 830 aa12.96□□□□□ -0.33
CCNC-205ENST00000484049 RTL5Q5HYW3 569 aaPredicted RBP12.96□□□□□ -0.33
CCNC-205ENST00000484049 ANGEL2Q5VTE6 544 aaKnown RBP12.96□□□□□ -0.33
CCNC-205ENST00000484049 GMLQ99445 158 aa12.96□□□□□ -0.33
CCNC-205ENST00000484049 PSME4Q14997 1843 aa12.96□□□□□ -0.33
CCNC-205ENST00000484049 BRCA2P51587 3418 aa12.96□□□□□ -0.33
CCNC-205ENST00000484049 SEC24BO95487 1268 aa12.96□□□□□ -0.34
CCNC-205ENST00000484049 TBC1D8O95759 1140 aa12.96□□□□□ -0.34
CCNC-205ENST00000484049 NEFMP07197 916 aa12.96□□□□□ -0.34
CCNC-205ENST00000484049 RIPK4P57078 832 aa12.96□□□□□ -0.34
CCNC-205ENST00000484049 ZNF467Q7Z7K2 595 aaPredicted RBP12.96□□□□□ -0.34
CCNC-205ENST00000484049 SULF1Q8IWU6 871 aa12.96□□□□□ -0.34
CCNC-205ENST00000484049 ZNF296Q8WUU4 475 aaPredicted RBP12.96□□□□□ -0.34
CCNC-205ENST00000484049 SEC31BQ9NQW1 1179 aa12.96□□□□□ -0.34
CCNC-205ENST00000484049 BABAM1Q9NWV8 329 aa12.96□□□□□ -0.34
CCNC-205ENST00000484049 CHPF2Q9P2E5 772 aa12.96□□□□□ -0.34
CCNC-205ENST00000484049 CIZ1Q9ULV3 898 aaPredicted RBP12.96□□□□□ -0.34
CCNC-205ENST00000484049 PAPPA2Q9BXP8 1791 aa12.95□□□□□ -0.34
CCNC-205ENST00000484049 RPS8P62241 208 aaKnown RBP12.95□□□□□ -0.34
CCNC-205ENST00000484049 PRAMEF18Q5VWM3 479 aa12.95□□□□□ -0.34
CCNC-205ENST00000484049 PLBD2Q8NHP8 589 aa12.95□□□□□ -0.34
CCNC-205ENST00000484049 R3HDMLQ9H3Y0 253 aa12.95□□□□□ -0.34
CCNC-205ENST00000484049 PODXL2Q9NZ53 605 aa12.95□□□□□ -0.34
CCNC-205ENST00000484049 ZNF609O15014 1411 aa12.95□□□□□ -0.34
CCNC-205ENST00000484049 MAPK8IP3Q9UPT6 1336 aa12.94□□□□□ -0.34
CCNC-205ENST00000484049 ZNF646O15015 1829 aaPredicted RBP12.94□□□□□ -0.34
CCNC-205ENST00000484049 WTIPA6NIX2 430 aaPredicted RBP12.94□□□□□ -0.34
CCNC-205ENST00000484049 UBE2Q2LH0YL09 131 aa12.94□□□□□ -0.34
CCNC-205ENST00000484049 TMPOP42166 694 aaKnown RBP12.94□□□□□ -0.34
CCNC-205ENST00000484049 RSBN1LQ6PCB5 846 aaPredicted RBP12.94□□□□□ -0.34
CCNC-205ENST00000484049 EYA3Q99504 573 aa12.94□□□□□ -0.34
CCNC-205ENST00000484049 CHL1O00533 1208 aa12.93□□□□□ -0.34
CCNC-205ENST00000484049 IRS4O14654 1257 aaPredicted RBP12.93□□□□□ -0.34
CCNC-205ENST00000484049 ANKRD13DQ6ZTN6 518 aa12.93□□□□□ -0.34
CCNC-205ENST00000484049 UFL1O94874 794 aa12.92□□□□□ -0.34
CCNC-205ENST00000484049 AGBL3Q8NEM8 1001 aa12.92□□□□□ -0.34
CCNC-205ENST00000484049 ZC3H12CQ9C0D7 883 aaKnown RBP12.92□□□□□ -0.34
CCNC-205ENST00000484049 TM4SF4P48230 202 aa12.91□□□□□ -0.34
CCNC-205ENST00000484049 FKBP1BP68106 108 aa12.91□□□□□ -0.34
CCNC-205ENST00000484049 TRIM28Q13263 835 aaKnown RBP12.91□□□□□ -0.34
CCNC-205ENST00000484049 PKN2Q16513 984 aaKnown RBP12.91□□□□□ -0.34
CCNC-205ENST00000484049 NBPF9Q3BBW0 867 aa12.91□□□□□ -0.34
CCNC-205ENST00000484049 MYOZ2Q9NPC6 264 aa12.91□□□□□ -0.34
CCNC-205ENST00000484049 PITPNM2Q9BZ72 1349 aa12.91□□□□□ -0.34
CCNC-205ENST00000484049 GPR25O00155 361 aa12.9□□□□□ -0.34
CCNC-205ENST00000484049 LCE2DQ5TA82 110 aaPredicted RBP12.9□□□□□ -0.34
CCNC-205ENST00000484049 MXD3Q9BW11 206 aa12.9□□□□□ -0.34
CCNC-205ENST00000484049 GGA1Q9UJY5 639 aa12.9□□□□□ -0.34
CCNC-205ENST00000484049 USP17L8P0C7I0 530 aa12.89□□□□□ -0.35
CCNC-205ENST00000484049 MKRN3Q13064 507 aaKnown RBP12.89□□□□□ -0.35
CCNC-205ENST00000484049 HDGFL1Q5TGJ6 251 aa12.89□□□□□ -0.35
CCNC-205ENST00000484049 FBXO46Q6PJ61 603 aaPredicted RBP12.89□□□□□ -0.35
CCNC-205ENST00000484049 JARID2Q92833 1246 aaPredicted RBP12.89□□□□□ -0.35
CCNC-205ENST00000484049 PNNQ9H307 717 aaKnown RBP12.89□□□□□ -0.35
CCNC-205ENST00000484049 HDAC9Q9UKV0 1011 aa12.89□□□□□ -0.35
CCNC-205ENST00000484049 PSEN1P49768 467 aa12.88□□□□□ -0.35
CCNC-205ENST00000484049 NOM1Q5C9Z4 860 aaKnown RBP12.88□□□□□ -0.35
CCNC-205ENST00000484049 ANKIB1Q9P2G1 1089 aa12.88□□□□□ -0.35
CCNC-205ENST00000484049 PTPN12Q05209 780 aaKnown RBP12.88□□□□□ -0.35
CCNC-205ENST00000484049 CCDC146Q8IYE0 955 aa12.88□□□□□ -0.35
CCNC-205ENST00000484049 ZBTB38Q8NAP3 1195 aaPredicted RBP12.88□□□□□ -0.35
CCNC-205ENST00000484049 CCDC85AQ96PX6 553 aaPredicted RBP12.88□□□□□ -0.35
CCNC-205ENST00000484049 CFHR5Q9BXR6 569 aa12.88□□□□□ -0.35
CCNC-205ENST00000484049 DBF4Q9UBU7 674 aaPredicted RBP12.88□□□□□ -0.35
CCNC-205ENST00000484049 LAS1LQ9Y4W2 734 aaKnown RBP12.88□□□□□ -0.35
CCNC-205ENST00000484049 USP17L3A6NCW0 530 aa12.87□□□□□ -0.35
CCNC-205ENST00000484049 USP17L4A6NCW7 530 aa12.87□□□□□ -0.35
CCNC-205ENST00000484049 WNT10BO00744 389 aa12.87□□□□□ -0.35
CCNC-205ENST00000484049 NEUROD2Q15784 382 aa12.87□□□□□ -0.35
CCNC-205ENST00000484049 DACT2Q5SW24 774 aa12.87□□□□□ -0.35
CCNC-205ENST00000484049 USP17L1Q7RTZ2 530 aa12.87□□□□□ -0.35
CCNC-205ENST00000484049 PHAXQ9H814 394 aaKnown RBP12.87□□□□□ -0.35
CCNC-205ENST00000484049 FZD1Q9UP38 647 aa12.87□□□□□ -0.35
CCNC-205ENST00000484049 G3V3G9 751 aa12.86□□□□□ -0.35
CCNC-205ENST00000484049 FKTNO75072 461 aa12.86□□□□□ -0.35
CCNC-205ENST00000484049 HOXB7P09629 217 aa12.86□□□□□ -0.35
CCNC-205ENST00000484049 LMOD3Q0VAK6 560 aa12.86□□□□□ -0.35
CCNC-205ENST00000484049 HABP4Q5JVS0 413 aaKnown RBP12.86□□□□□ -0.35
CCNC-205ENST00000484049 PODNQ7Z5L7 613 aa12.86□□□□□ -0.35
CCNC-205ENST00000484049 OCEL1Q9H607 264 aa12.86□□□□□ -0.35
CCNC-205ENST00000484049 HYPKQ9NX55 129 aa12.86□□□□□ -0.35
CCNC-205ENST00000484049 PLCG2P16885 1265 aa12.85□□□□□ -0.35
CCNC-205ENST00000484049 CAP1Q01518 475 aa12.85□□□□□ -0.35
CCNC-205ENST00000484049 LDLRAD1Q5T700 205 aa12.85□□□□□ -0.35
CCNC-205ENST00000484049 DUSP27Q5VZP5 1158 aa12.85□□□□□ -0.35
CCNC-205ENST00000484049 TXNRD3Q86VQ6 643 aa12.85□□□□□ -0.35
CCNC-205ENST00000484049 MYD88Q99836 296 aa12.85□□□□□ -0.35
CCNC-205ENST00000484049 XDHP47989 1333 aa12.85□□□□□ -0.35
CCNC-205ENST00000484049 SZT2Q5T011 3432 aa12.84□□□□□ -0.35
CCNC-205ENST00000484049 PDE8AO60658 829 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms