RNA–Protein interactions for RNA: ENST00000484006.1

THUMPD3-209, Transcript of THUMP domain containing 3, humanhuman

TSL 4

Gene THUMPD3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-209ENST00000484006 ZFP64Q9NPA5 681 aa8.2□□□□□ -1.1
THUMPD3-209ENST00000484006 ACIN1Q9UKV3 1341 aaKnown RBP8.2□□□□□ -1.1
THUMPD3-209ENST00000484006 MTUS2Q5JR59 1369 aa8.2□□□□□ -1.1
THUMPD3-209ENST00000484006 FYCO1Q9BQS8 1478 aa8.19□□□□□ -1.1
THUMPD3-209ENST00000484006 BRD2P25440 801 aaKnown RBP8.19□□□□□ -1.1
THUMPD3-209ENST00000484006 FKBP5Q13451 457 aaPredicted RBP8.19□□□□□ -1.1
THUMPD3-209ENST00000484006 ELOAQ14241 798 aaKnown RBP8.19□□□□□ -1.1
THUMPD3-209ENST00000484006 ARTNQ5T4W7 220 aa8.19□□□□□ -1.1
THUMPD3-209ENST00000484006 KDM5BQ9UGL1 1544 aa8.19□□□□□ -1.1
THUMPD3-209ENST00000484006 GHRHP01286 108 aa8.18□□□□□ -1.1
THUMPD3-209ENST00000484006 IREB2P48200 963 aaKnown RBP8.18□□□□□ -1.1
THUMPD3-209ENST00000484006 KCNMB2Q9Y691 235 aa8.18□□□□□ -1.1
THUMPD3-209ENST00000484006 WDR7Q9Y4E6 1490 aa8.18□□□□□ -1.1
THUMPD3-209ENST00000484006 J3QW42 95 aa8.17□□□□□ -1.1
THUMPD3-209ENST00000484006 PRMT3O60678 531 aa8.17□□□□□ -1.1
THUMPD3-209ENST00000484006 MMP20O60882 483 aa8.17□□□□□ -1.1
THUMPD3-209ENST00000484006 SOX18P35713 384 aa8.17□□□□□ -1.1
THUMPD3-209ENST00000484006 C16orf46Q6P387 395 aa8.17□□□□□ -1.1
THUMPD3-209ENST00000484006 COL26A1Q96A83 441 aa8.17□□□□□ -1.1
THUMPD3-209ENST00000484006 PLD4Q96BZ4 506 aa8.17□□□□□ -1.1
THUMPD3-209ENST00000484006 FAM13BQ9NYF5 915 aa8.17□□□□□ -1.1
THUMPD3-209ENST00000484006 CCDC18Q5T9S5 1454 aa8.17□□□□□ -1.1
THUMPD3-209ENST00000484006 NBPF11Q86T75 865 aa8.16□□□□□ -1.1
THUMPD3-209ENST00000484006 DCAF11Q8TEB1 546 aa8.16□□□□□ -1.1
THUMPD3-209ENST00000484006 DEAF1O75398 565 aaPredicted RBP8.15□□□□□ -1.1
THUMPD3-209ENST00000484006 HOXD8P13378 290 aaPredicted RBP8.15□□□□□ -1.1
THUMPD3-209ENST00000484006 NOS3P29474 1203 aa8.15□□□□□ -1.1
THUMPD3-209ENST00000484006 GDF6Q6KF10 455 aaPredicted RBP8.15□□□□□ -1.1
THUMPD3-209ENST00000484006 NLRP13Q86W25 1043 aa8.15□□□□□ -1.1
THUMPD3-209ENST00000484006 CACTIN-AS1Q8N1I8 211 aa8.15□□□□□ -1.1
THUMPD3-209ENST00000484006 PIK3R5Q8WYR1 880 aa8.15□□□□□ -1.1
THUMPD3-209ENST00000484006 SRA1Q9HD15 236 aaKnown RBP8.15□□□□□ -1.1
THUMPD3-209ENST00000484006 TSPOAP1O95153 1857 aa8.15□□□□□ -1.11
THUMPD3-209ENST00000484006 DLL1O00548 723 aa8.14□□□□□ -1.11
THUMPD3-209ENST00000484006 OCLNQ16625 522 aa8.14□□□□□ -1.11
THUMPD3-209ENST00000484006 ETFBKMTQ8IXQ9 262 aa8.14□□□□□ -1.11
THUMPD3-209ENST00000484006 IL22RA1Q8N6P7 574 aa8.14□□□□□ -1.11
THUMPD3-209ENST00000484006 NSUN5Q96P11 429 aaKnown RBP8.14□□□□□ -1.11
THUMPD3-209ENST00000484006 SAP130Q9H0E3 1048 aa8.14□□□□□ -1.11
THUMPD3-209ENST00000484006 LRRIQ1Q96JM4 1722 aa8.14□□□□□ -1.11
THUMPD3-209ENST00000484006 MAPKBP1O60336 1514 aa8.13□□□□□ -1.11
THUMPD3-209ENST00000484006 ABCC10Q5T3U5 1492 aa8.13□□□□□ -1.11
THUMPD3-209ENST00000484006 TROQ12816 1431 aaPredicted RBP8.13□□□□□ -1.11
THUMPD3-209ENST00000484006 PTCD1O75127 700 aaKnown RBP8.13□□□□□ -1.11
THUMPD3-209ENST00000484006 MAP4K3Q8IVH8 894 aa8.13□□□□□ -1.11
THUMPD3-209ENST00000484006 TMEM130Q8N3G9 435 aa8.13□□□□□ -1.11
THUMPD3-209ENST00000484006 PSMG3-AS1Q96PY0 264 aa8.13□□□□□ -1.11
THUMPD3-209ENST00000484006 MRPL18Q9H0U6 180 aaKnown RBP8.13□□□□□ -1.11
THUMPD3-209ENST00000484006 MUC3BQ9H195 1237 aa8.13□□□□□ -1.11
THUMPD3-209ENST00000484006 AKTIPQ9H8T0 292 aa8.13□□□□□ -1.11
THUMPD3-209ENST00000484006 ZMIZ1Q9ULJ6 1067 aa8.13□□□□□ -1.11
THUMPD3-209ENST00000484006 FNDC3AQ9Y2H6 1198 aaKnown RBP8.13□□□□□ -1.11
THUMPD3-209ENST00000484006 CD109Q6YHK3 1445 aa8.12□□□□□ -1.11
THUMPD3-209ENST00000484006 CCNB3Q8WWL7 1395 aa8.12□□□□□ -1.11
THUMPD3-209ENST00000484006 LRP8Q14114 963 aa8.12□□□□□ -1.11
THUMPD3-209ENST00000484006 CXXC1Q9P0U4 656 aaPredicted RBP8.12□□□□□ -1.11
THUMPD3-209ENST00000484006 TIAM1Q13009 1591 aa8.12□□□□□ -1.11
THUMPD3-209ENST00000484006 KIF14Q15058 1648 aa8.11□□□□□ -1.11
THUMPD3-209ENST00000484006 DIP2BQ9P265 1576 aa8.11□□□□□ -1.11
THUMPD3-209ENST00000484006 UBAP1LF5GYI3 381 aa8.11□□□□□ -1.11
THUMPD3-209ENST00000484006 ATG7O95352 703 aa8.11□□□□□ -1.11
THUMPD3-209ENST00000484006 SLC51AQ86UW1 340 aa8.11□□□□□ -1.11
THUMPD3-209ENST00000484006 MEGF10Q96KG7 1140 aa8.11□□□□□ -1.11
THUMPD3-209ENST00000484006 SPACA7Q96KW9 195 aa8.11□□□□□ -1.11
THUMPD3-209ENST00000484006 KRTAP4-8Q9BYQ9 185 aa8.11□□□□□ -1.11
THUMPD3-209ENST00000484006 CFDP1Q9UEE9 299 aaPredicted RBP8.11□□□□□ -1.11
THUMPD3-209ENST00000484006 MAGI3Q5TCQ9 1506 aa8.11□□□□□ -1.11
THUMPD3-209ENST00000484006 ITGAEP38570 1179 aa8.1□□□□□ -1.11
THUMPD3-209ENST00000484006 SRPK2P78362 688 aaKnown RBP8.1□□□□□ -1.11
THUMPD3-209ENST00000484006 FAM50AQ14320 339 aaKnown RBP8.1□□□□□ -1.11
THUMPD3-209ENST00000484006 NAA30Q147X3 362 aaPredicted RBP8.1□□□□□ -1.11
THUMPD3-209ENST00000484006 TTC39BQ5VTQ0 682 aaPredicted RBP8.1□□□□□ -1.11
THUMPD3-209ENST00000484006 PRR23CQ6ZRP0 262 aa8.1□□□□□ -1.11
THUMPD3-209ENST00000484006 DZIP1LQ8IYY4 767 aaKnown RBP8.1□□□□□ -1.11
THUMPD3-209ENST00000484006 OR13H1Q8NG92 308 aa8.1□□□□□ -1.11
THUMPD3-209ENST00000484006 STK32AQ8WU08 396 aa8.1□□□□□ -1.11
THUMPD3-209ENST00000484006 PPME1Q9Y570 386 aa8.1□□□□□ -1.11
THUMPD3-209ENST00000484006 ARHGAP5Q13017 1502 aa8.09□□□□□ -1.11
THUMPD3-209ENST00000484006 EHBP1L1Q8N3D4 1523 aa8.09□□□□□ -1.11
THUMPD3-209ENST00000484006 CFAP43Q8NDM7 1665 aa8.09□□□□□ -1.11
THUMPD3-209ENST00000484006 LRRC9Q6ZRR7 1453 aa8.09□□□□□ -1.11
THUMPD3-209ENST00000484006 HYAL3O43820 417 aaPredicted RBP8.09□□□□□ -1.11
THUMPD3-209ENST00000484006 HYAL2Q12891 473 aa8.09□□□□□ -1.11
THUMPD3-209ENST00000484006 SETDB1Q15047 1291 aa8.09□□□□□ -1.11
THUMPD3-209ENST00000484006 TRIP4Q15650 581 aaPredicted RBP8.09□□□□□ -1.11
THUMPD3-209ENST00000484006 EFCAB2Q5VUJ9 269 aa8.09□□□□□ -1.11
THUMPD3-209ENST00000484006 MKNK1Q9BUB5 465 aa8.09□□□□□ -1.11
THUMPD3-209ENST00000484006 RNF112Q9ULX5 631 aa8.09□□□□□ -1.11
THUMPD3-209ENST00000484006 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.08□□□□□ -1.12
THUMPD3-209ENST00000484006 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.08□□□□□ -1.12
THUMPD3-209ENST00000484006 F8W735 103 aaPredicted RBP8.08□□□□□ -1.12
THUMPD3-209ENST00000484006 ZAP70P43403 619 aa8.08□□□□□ -1.12
THUMPD3-209ENST00000484006 STIM2Q9P246 746 aa8.08□□□□□ -1.12
THUMPD3-209ENST00000484006 TRIM33Q9UPN9 1127 aa8.08□□□□□ -1.12
THUMPD3-209ENST00000484006 TTC37Q6PGP7 1564 aa8.08□□□□□ -1.12
THUMPD3-209ENST00000484006 KIF13AQ9H1H9 1805 aa8.08□□□□□ -1.12
THUMPD3-209ENST00000484006 NCOA2Q15596 1464 aa8.07□□□□□ -1.12
THUMPD3-209ENST00000484006 TNFRSF10BO14763 440 aa8.07□□□□□ -1.12
THUMPD3-209ENST00000484006 ALX3O95076 343 aa8.07□□□□□ -1.12
THUMPD3-209ENST00000484006 HNRNPMP52272 730 aaKnown RBP eCLIP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms