RNA–Protein interactions for RNA: ENST00000483981.2

SHANK1-208, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 422 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-208ENST00000483981 EPS15P42566 896 aa15.35■□□□□ 0.05
SHANK1-208ENST00000483981 GMPSP49915 693 aaPredicted RBP15.35■□□□□ 0.05
SHANK1-208ENST00000483981 UBE4AQ14139 1066 aa15.35■□□□□ 0.05
SHANK1-208ENST00000483981 ITPRIPQ8IWB1 547 aa15.35■□□□□ 0.05
SHANK1-208ENST00000483981 COA1Q9GZY4 146 aa15.35■□□□□ 0.05
SHANK1-208ENST00000483981 HACL1Q9UJ83 578 aa15.35■□□□□ 0.05
SHANK1-208ENST00000483981 PNMA6EA0A0J9YXQ4 647 aa15.34■□□□□ 0.05
SHANK1-208ENST00000483981 PDE8BO95263 885 aa15.34■□□□□ 0.05
SHANK1-208ENST00000483981 FGFR2P21802 821 aa15.34■□□□□ 0.05
SHANK1-208ENST00000483981 EPHX2P34913 555 aa15.34■□□□□ 0.05
SHANK1-208ENST00000483981 GMLQ99445 158 aa15.34■□□□□ 0.05
SHANK1-208ENST00000483981 PA2G4Q9UQ80 394 aaKnown RBP15.34■□□□□ 0.05
SHANK1-208ENST00000483981 ZBTB12Q9Y330 459 aaPredicted RBP15.34■□□□□ 0.05
SHANK1-208ENST00000483981 SHTN1A0MZ66 631 aa15.33■□□□□ 0.04
SHANK1-208ENST00000483981 SRGAP3O43295 1099 aa15.33■□□□□ 0.04
SHANK1-208ENST00000483981 MS4A1P11836 297 aa15.33■□□□□ 0.04
SHANK1-208ENST00000483981 KCNJ4P48050 445 aa15.33■□□□□ 0.04
SHANK1-208ENST00000483981 POLA2Q14181 598 aa15.33■□□□□ 0.04
SHANK1-208ENST00000483981 PDE3AQ14432 1141 aa15.33■□□□□ 0.04
SHANK1-208ENST00000483981 MVPQ14764 893 aaKnown RBP15.33■□□□□ 0.04
SHANK1-208ENST00000483981 C20orf194Q5TEA3 1177 aa15.33■□□□□ 0.04
SHANK1-208ENST00000483981 DPF2Q92785 391 aa15.33■□□□□ 0.04
SHANK1-208ENST00000483981 CD209Q9NNX6 404 aa15.33■□□□□ 0.04
SHANK1-208ENST00000483981 IL1R1P14778 569 aa15.32■□□□□ 0.04
SHANK1-208ENST00000483981 ATP8B2P98198 1209 aa15.32■□□□□ 0.04
SHANK1-208ENST00000483981 FSTL1Q12841 308 aa15.32■□□□□ 0.04
SHANK1-208ENST00000483981 METTL24Q5JXM2 366 aa15.32■□□□□ 0.04
SHANK1-208ENST00000483981 DACT2Q5SW24 774 aa15.32■□□□□ 0.04
SHANK1-208ENST00000483981 C16orf71Q8IYS4 520 aaPredicted RBP15.32■□□□□ 0.04
SHANK1-208ENST00000483981 FAM84BQ96KN1 310 aaPredicted RBP15.32■□□□□ 0.04
SHANK1-208ENST00000483981 C1orf115Q9H7X2 142 aa15.32■□□□□ 0.04
SHANK1-208ENST00000483981 USP17L3A6NCW0 530 aa15.31■□□□□ 0.04
SHANK1-208ENST00000483981 USP17L4A6NCW7 530 aa15.31■□□□□ 0.04
SHANK1-208ENST00000483981 G3V3G9 751 aa15.31■□□□□ 0.04
SHANK1-208ENST00000483981 RPS12P25398 132 aaKnown RBP15.31■□□□□ 0.04
SHANK1-208ENST00000483981 DCAF8Q5TAQ9 597 aa15.31■□□□□ 0.04
SHANK1-208ENST00000483981 RSBN1LQ6PCB5 846 aaPredicted RBP15.31■□□□□ 0.04
SHANK1-208ENST00000483981 USP17L1Q7RTZ2 530 aa15.31■□□□□ 0.04
SHANK1-208ENST00000483981 FBXO33Q7Z6M2 555 aa15.31■□□□□ 0.04
SHANK1-208ENST00000483981 PNMA8AQ86V59 439 aaPredicted RBP15.31■□□□□ 0.04
SHANK1-208ENST00000483981 SSH3Q8TE77 659 aa15.31■□□□□ 0.04
SHANK1-208ENST00000483981 SIL1Q9H173 461 aa15.31■□□□□ 0.04
SHANK1-208ENST00000483981 ZBTB40Q9NUA8 1239 aa15.31■□□□□ 0.04
SHANK1-208ENST00000483981 CNOT7Q9UIV1 285 aaKnown RBP15.31■□□□□ 0.04
SHANK1-208ENST00000483981 COG6Q9Y2V7 657 aa15.31■□□□□ 0.04
SHANK1-208ENST00000483981 LMOD1P29536 600 aaPredicted RBP15.3■□□□□ 0.04
SHANK1-208ENST00000483981 IL15P40933 162 aaPredicted RBP15.3■□□□□ 0.04
SHANK1-208ENST00000483981 HIRAP54198 1017 aaPredicted RBP15.3■□□□□ 0.04
SHANK1-208ENST00000483981 STRIP1Q5VSL9 837 aa15.3■□□□□ 0.04
SHANK1-208ENST00000483981 LDHDQ86WU2 507 aa15.3■□□□□ 0.04
SHANK1-208ENST00000483981 SMC1BQ8NDV3 1235 aa15.3■□□□□ 0.04
SHANK1-208ENST00000483981 AGBL3Q8NEM8 1001 aa15.3■□□□□ 0.04
SHANK1-208ENST00000483981 TDRD7Q8NHU6 1098 aaKnown RBP15.3■□□□□ 0.04
SHANK1-208ENST00000483981 ADARB2Q9NS39 739 aaKnown RBP15.3■□□□□ 0.04
SHANK1-208ENST00000483981 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.3■□□□□ 0.04
SHANK1-208ENST00000483981 GYG1P46976 350 aa15.29■□□□□ 0.04
SHANK1-208ENST00000483981 ZNF280AP59817 542 aaPredicted RBP15.29■□□□□ 0.04
SHANK1-208ENST00000483981 PUM3Q15397 648 aaKnown RBP15.29■□□□□ 0.04
SHANK1-208ENST00000483981 CHADLQ6NUI6 762 aa15.29■□□□□ 0.04
SHANK1-208ENST00000483981 CEP85Q6P2H3 762 aa15.29■□□□□ 0.04
SHANK1-208ENST00000483981 USP50Q70EL3 339 aaPredicted RBP15.29■□□□□ 0.04
SHANK1-208ENST00000483981 MICALL2Q8IY33 904 aa15.29■□□□□ 0.04
SHANK1-208ENST00000483981 MXD3Q9BW11 206 aa15.29■□□□□ 0.04
SHANK1-208ENST00000483981 PGAP2Q9UHJ9 254 aa15.29■□□□□ 0.04
SHANK1-208ENST00000483981 DDX19BQ9UMR2 479 aa15.29■□□□□ 0.04
SHANK1-208ENST00000483981 EGFRP00533 1210 aa15.28■□□□□ 0.04
SHANK1-208ENST00000483981 TTLL5Q6EMB2 1281 aa15.28■□□□□ 0.04
SHANK1-208ENST00000483981 ZNF804AQ7Z570 1209 aa15.28■□□□□ 0.04
SHANK1-208ENST00000483981 TRPM4Q8TD43 1214 aa15.28■□□□□ 0.04
SHANK1-208ENST00000483981 FAM205AQ6ZU69 1335 aa15.27■□□□□ 0.04
SHANK1-208ENST00000483981 SASH1O94885 1247 aa15.27■□□□□ 0.04
SHANK1-208ENST00000483981 ITGBL1O95965 494 aaPredicted RBP15.27■□□□□ 0.04
SHANK1-208ENST00000483981 HIBADHP31937 336 aaKnown RBP15.27■□□□□ 0.04
SHANK1-208ENST00000483981 GTF2IP78347 998 aa15.27■□□□□ 0.04
SHANK1-208ENST00000483981 EAPPQ56P03 285 aaPredicted RBP15.27■□□□□ 0.04
SHANK1-208ENST00000483981 SAMD7Q7Z3H4 446 aa15.27■□□□□ 0.04
SHANK1-208ENST00000483981 CERS5Q8N5B7 392 aa15.27■□□□□ 0.04
SHANK1-208ENST00000483981 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.27■□□□□ 0.04
SHANK1-208ENST00000483981 LPIN2Q92539 896 aa15.27■□□□□ 0.04
SHANK1-208ENST00000483981 CEP126Q9P2H0 1117 aa15.27■□□□□ 0.04
SHANK1-208ENST00000483981 NOP58Q9Y2X3 529 aaKnown RBP15.27■□□□□ 0.04
SHANK1-208ENST00000483981 PASKQ96RG2 1323 aa15.26■□□□□ 0.03
SHANK1-208ENST00000483981 H7C1D1 291 aa15.26■□□□□ 0.03
SHANK1-208ENST00000483981 HSPA6P17066 643 aa15.26■□□□□ 0.03
SHANK1-208ENST00000483981 BCAMP50895 628 aa15.26■□□□□ 0.03
SHANK1-208ENST00000483981 SIRT2Q8IXJ6 389 aa15.26■□□□□ 0.03
SHANK1-208ENST00000483981 MYO3BQ8WXR4 1341 aa15.25■□□□□ 0.03
SHANK1-208ENST00000483981 ZBTB22O15209 634 aa15.25■□□□□ 0.03
SHANK1-208ENST00000483981 IFIT1P09914 478 aaKnown RBP15.25■□□□□ 0.03
SHANK1-208ENST00000483981 USP17L8P0C7I0 530 aa15.25■□□□□ 0.03
SHANK1-208ENST00000483981 RRP1P56182 461 aaKnown RBP15.25■□□□□ 0.03
SHANK1-208ENST00000483981 FKBP1AP62942 108 aaKnown RBP15.25■□□□□ 0.03
SHANK1-208ENST00000483981 TFCP2Q12800 502 aa15.25■□□□□ 0.03
SHANK1-208ENST00000483981 ARAP2Q8WZ64 1704 aa15.24■□□□□ 0.03
SHANK1-208ENST00000483981 ATP2B3Q16720 1220 aa15.24■□□□□ 0.03
SHANK1-208ENST00000483981 TBC1D10BQ4KMP7 808 aaPredicted RBP15.24■□□□□ 0.03
SHANK1-208ENST00000483981 MAP1SQ66K74 1059 aaPredicted RBP15.24■□□□□ 0.03
SHANK1-208ENST00000483981 CNTROBQ8N137 903 aa15.24■□□□□ 0.03
SHANK1-208ENST00000483981 ZC3H15Q8WU90 426 aaKnown RBP15.24■□□□□ 0.03
SHANK1-208ENST00000483981 SLC5A1P13866 664 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms