RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 SCARF1Q14162 830 aa19.64■□□□□ 0.73
RFTN1-209ENST00000483671 C15orf52Q6ZUT6 534 aaKnown RBP19.64■□□□□ 0.73
RFTN1-209ENST00000483671 MASTLQ96GX5 879 aa19.64■□□□□ 0.73
RFTN1-209ENST00000483671 USP26Q9BXU7 913 aa19.64■□□□□ 0.73
RFTN1-209ENST00000483671 XDHP47989 1333 aa19.64■□□□□ 0.73
RFTN1-209ENST00000483671 IRS2Q9Y4H2 1338 aa19.64■□□□□ 0.73
RFTN1-209ENST00000483671 C10orf71Q711Q0 1435 aa19.64■□□□□ 0.73
RFTN1-209ENST00000483671 COL11A2P13942 1736 aaPredicted RBP19.64■□□□□ 0.73
RFTN1-209ENST00000483671 SNAP23O00161 211 aa19.63■□□□□ 0.73
RFTN1-209ENST00000483671 GOLIM4O00461 696 aa19.63■□□□□ 0.73
RFTN1-209ENST00000483671 ALDH1B1P30837 517 aa19.63■□□□□ 0.73
RFTN1-209ENST00000483671 ANP32AP39687 249 aaKnown RBP19.63■□□□□ 0.73
RFTN1-209ENST00000483671 STYK1Q6J9G0 422 aa19.63■□□□□ 0.73
RFTN1-209ENST00000483671 EDC3Q96F86 508 aaKnown RBP19.63■□□□□ 0.73
RFTN1-209ENST00000483671 PODXL2Q9NZ53 605 aa19.63■□□□□ 0.73
RFTN1-209ENST00000483671 TTF1Q15361 905 aaPredicted RBP19.62■□□□□ 0.73
RFTN1-209ENST00000483671 LRRFIP1Q32MZ4 808 aaKnown RBP19.62■□□□□ 0.73
RFTN1-209ENST00000483671 FBXO33Q7Z6M2 555 aa19.62■□□□□ 0.73
RFTN1-209ENST00000483671 SP8Q8IXZ3 490 aa19.62■□□□□ 0.73
RFTN1-209ENST00000483671 PDS5AQ29RF7 1337 aaKnown RBP19.61■□□□□ 0.73
RFTN1-209ENST00000483671 SEMA3EO15041 775 aa19.61■□□□□ 0.73
RFTN1-209ENST00000483671 KCNJ4P48050 445 aa19.61■□□□□ 0.73
RFTN1-209ENST00000483671 CAVIN4Q5BKX8 364 aa19.61■□□□□ 0.73
RFTN1-209ENST00000483671 GNL3LQ9NVN8 582 aaKnown RBP19.61■□□□□ 0.73
RFTN1-209ENST00000483671 ATP6V0A2Q9Y487 856 aa19.61■□□□□ 0.73
RFTN1-209ENST00000483671 NDUFB9Q9Y6M9 179 aa19.61■□□□□ 0.73
RFTN1-209ENST00000483671 LTBP1Q14766 1721 aa19.61■□□□□ 0.73
RFTN1-209ENST00000483671 MED23Q9ULK4 1368 aa19.6■□□□□ 0.73
RFTN1-209ENST00000483671 PPEF1O14829 653 aaPredicted RBP19.6■□□□□ 0.73
RFTN1-209ENST00000483671 ZAP70P43403 619 aa19.6■□□□□ 0.73
RFTN1-209ENST00000483671 BCAMP50895 628 aa19.6■□□□□ 0.73
RFTN1-209ENST00000483671 FKBP4Q02790 459 aaKnown RBP eCLIP19.6■□□□□ 0.73
RFTN1-209ENST00000483671 RASGRF1Q13972 1273 aa19.6■□□□□ 0.73
RFTN1-209ENST00000483671 CWC27Q6UX04 472 aaKnown RBP19.6■□□□□ 0.73
RFTN1-209ENST00000483671 SPATA5Q8NB90 893 aa19.6■□□□□ 0.73
RFTN1-209ENST00000483671 FAM84BQ96KN1 310 aaPredicted RBP19.6■□□□□ 0.73
RFTN1-209ENST00000483671 IL25Q9H293 177 aa19.6■□□□□ 0.73
RFTN1-209ENST00000483671 HMG20BQ9P0W2 317 aa19.6■□□□□ 0.73
RFTN1-209ENST00000483671 H0YIN7 160 aa19.59■□□□□ 0.73
RFTN1-209ENST00000483671 ZFYP08048 801 aaPredicted RBP19.59■□□□□ 0.73
RFTN1-209ENST00000483671 ATP2B4P23634 1241 aa19.59■□□□□ 0.73
RFTN1-209ENST00000483671 NMIQ13287 307 aaPredicted RBP19.59■□□□□ 0.73
RFTN1-209ENST00000483671 C2CD5Q86YS7 1000 aa19.59■□□□□ 0.73
RFTN1-209ENST00000483671 ANTXR1Q9H6X2 564 aa19.59■□□□□ 0.73
RFTN1-209ENST00000483671 ANKIB1Q9P2G1 1089 aa19.59■□□□□ 0.73
RFTN1-209ENST00000483671 CYP2E1P05181 493 aaPredicted RBP19.58■□□□□ 0.73
RFTN1-209ENST00000483671 GPSM2P81274 684 aa19.58■□□□□ 0.73
RFTN1-209ENST00000483671 IL17RAQ96F46 866 aa19.58■□□□□ 0.73
RFTN1-209ENST00000483671 FAM227BQ96M60 508 aa19.58■□□□□ 0.73
RFTN1-209ENST00000483671 MTFR1LQ9H019 292 aa19.58■□□□□ 0.73
RFTN1-209ENST00000483671 A0A0D9SFI3 127 aa19.57■□□□□ 0.72
RFTN1-209ENST00000483671 WTIPA6NIX2 430 aaPredicted RBP19.57■□□□□ 0.72
RFTN1-209ENST00000483671 RNF113AO15541 343 aaKnown RBP19.57■□□□□ 0.72
RFTN1-209ENST00000483671 GYG1P46976 350 aa19.57■□□□□ 0.72
RFTN1-209ENST00000483671 ZMYM1Q5SVZ6 1142 aa19.57■□□□□ 0.72
RFTN1-209ENST00000483671 PI16Q6UXB8 463 aa19.57■□□□□ 0.72
RFTN1-209ENST00000483671 LSG1Q9H089 658 aaKnown RBP19.57■□□□□ 0.72
RFTN1-209ENST00000483671 ANO2Q9NQ90 1003 aa19.57■□□□□ 0.72
RFTN1-209ENST00000483671 HELLSQ9NRZ9 838 aa19.57■□□□□ 0.72
RFTN1-209ENST00000483671 KIF13BQ9NQT8 1826 aa19.57■□□□□ 0.72
RFTN1-209ENST00000483671 HIBADHP31937 336 aaKnown RBP19.56■□□□□ 0.72
RFTN1-209ENST00000483671 ZSCAN25Q6NSZ9 544 aa19.56■□□□□ 0.72
RFTN1-209ENST00000483671 CNKSR1Q969H4 720 aa19.56■□□□□ 0.72
RFTN1-209ENST00000483671 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.56■□□□□ 0.72
RFTN1-209ENST00000483671 GGA1Q9UJY5 639 aa19.56■□□□□ 0.72
RFTN1-209ENST00000483671 DENND2AQ9ULE3 1009 aa19.56■□□□□ 0.72
RFTN1-209ENST00000483671 DLEC1Q9Y238 1755 aa19.55■□□□□ 0.72
RFTN1-209ENST00000483671 IGSF3O75054 1194 aa19.55■□□□□ 0.72
RFTN1-209ENST00000483671 KLRK1P26718 216 aa19.55■□□□□ 0.72
RFTN1-209ENST00000483671 MCMDC2Q4G0Z9 681 aa19.55■□□□□ 0.72
RFTN1-209ENST00000483671 KIAA1211Q6ZU35 1233 aa19.55■□□□□ 0.72
RFTN1-209ENST00000483671 DDRGK1Q96HY6 314 aa19.55■□□□□ 0.72
RFTN1-209ENST00000483671 PIH1D3Q9NQM4 214 aaKnown RBP19.55■□□□□ 0.72
RFTN1-209ENST00000483671 DOCK2Q92608 1830 aa19.55■□□□□ 0.72
RFTN1-209ENST00000483671 VPS37DQ86XT2 251 aa19.54■□□□□ 0.72
RFTN1-209ENST00000483671 TBC1D16Q8TBP0 767 aa19.54■□□□□ 0.72
RFTN1-209ENST00000483671 KIF2CQ99661 725 aa19.54■□□□□ 0.72
RFTN1-209ENST00000483671 NSFL1CQ9UNZ2 370 aaKnown RBP19.54■□□□□ 0.72
RFTN1-209ENST00000483671 COL1A1P02452 1464 aaPredicted RBP19.54■□□□□ 0.72
RFTN1-209ENST00000483671 CCDC171Q6TFL3 1326 aa19.54■□□□□ 0.72
RFTN1-209ENST00000483671 UFL1O94874 794 aa19.53■□□□□ 0.72
RFTN1-209ENST00000483671 MCCP23508 829 aa19.53■□□□□ 0.72
RFTN1-209ENST00000483671 ANAPC15P60006 121 aa19.53■□□□□ 0.72
RFTN1-209ENST00000483671 UBE3CQ15386 1083 aa19.53■□□□□ 0.72
RFTN1-209ENST00000483671 SLC51AQ86UW1 340 aa19.53■□□□□ 0.72
RFTN1-209ENST00000483671 MYH7P12883 1935 aa19.53■□□□□ 0.72
RFTN1-209ENST00000483671 POLD1P28340 1107 aa19.52■□□□□ 0.72
RFTN1-209ENST00000483671 HSPA4P34932 840 aa19.52■□□□□ 0.72
RFTN1-209ENST00000483671 ADD2P35612 726 aa19.52■□□□□ 0.72
RFTN1-209ENST00000483671 R3HDM1Q15032 1099 aaKnown RBP19.52■□□□□ 0.72
RFTN1-209ENST00000483671 PRPF40BQ6NWY9 871 aaKnown RBP19.52■□□□□ 0.72
RFTN1-209ENST00000483671 TMED8Q6PL24 325 aaPredicted RBP19.52■□□□□ 0.72
RFTN1-209ENST00000483671 ZNF804AQ7Z570 1209 aa19.52■□□□□ 0.72
RFTN1-209ENST00000483671 TXNRD3Q86VQ6 643 aa19.52■□□□□ 0.72
RFTN1-209ENST00000483671 APPBP2Q92624 585 aa19.52■□□□□ 0.72
RFTN1-209ENST00000483671 ZNF622Q969S3 477 aaKnown RBP eCLIP19.52■□□□□ 0.72
RFTN1-209ENST00000483671 IPO9Q96P70 1041 aaKnown RBP19.52■□□□□ 0.72
RFTN1-209ENST00000483671 POLLQ9UGP5 575 aa19.52■□□□□ 0.72
RFTN1-209ENST00000483671 DUOX1Q9NRD9 1551 aa19.52■□□□□ 0.72
RFTN1-209ENST00000483671 ZBTB7AO95365 584 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms