RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 SCNN1DP51172 638 aa20.24■□□□□ 0.83
COL2A1-206ENST00000483376 RRP1P56182 461 aaKnown RBP20.24■□□□□ 0.83
COL2A1-206ENST00000483376 DOK7Q18PE1 504 aa20.24■□□□□ 0.83
COL2A1-206ENST00000483376 TXNRD3Q86VQ6 643 aa20.24■□□□□ 0.83
COL2A1-206ENST00000483376 DPF2Q92785 391 aa20.24■□□□□ 0.83
COL2A1-206ENST00000483376 PNMA6EA0A0J9YXQ4 647 aa20.23■□□□□ 0.83
COL2A1-206ENST00000483376 G3V3G9 751 aa20.23■□□□□ 0.83
COL2A1-206ENST00000483376 TOMM70O94826 608 aa20.23■□□□□ 0.83
COL2A1-206ENST00000483376 VIL1P09327 827 aaKnown RBP20.23■□□□□ 0.83
COL2A1-206ENST00000483376 KLRK1P26718 216 aa20.23■□□□□ 0.83
COL2A1-206ENST00000483376 PUM3Q15397 648 aaKnown RBP20.23■□□□□ 0.83
COL2A1-206ENST00000483376 DCAF8Q5TAQ9 597 aa20.23■□□□□ 0.83
COL2A1-206ENST00000483376 HACL1Q9UJ83 578 aa20.23■□□□□ 0.83
COL2A1-206ENST00000483376 PSME4Q14997 1843 aa20.23■□□□□ 0.83
COL2A1-206ENST00000483376 SNAP23O00161 211 aa20.22■□□□□ 0.83
COL2A1-206ENST00000483376 ZBTB22O15209 634 aa20.22■□□□□ 0.83
COL2A1-206ENST00000483376 RAD17O75943 681 aa20.22■□□□□ 0.83
COL2A1-206ENST00000483376 C20orf194Q5TEA3 1177 aa20.22■□□□□ 0.83
COL2A1-206ENST00000483376 CEP85Q6P2H3 762 aa20.22■□□□□ 0.83
COL2A1-206ENST00000483376 PA2G4Q9UQ80 394 aaKnown RBP20.22■□□□□ 0.83
COL2A1-206ENST00000483376 GJA3Q9Y6H8 435 aa20.22■□□□□ 0.83
COL2A1-206ENST00000483376 SCN9AQ15858 1988 aa20.22■□□□□ 0.83
COL2A1-206ENST00000483376 PSMD14O00487 310 aa20.21■□□□□ 0.83
COL2A1-206ENST00000483376 IL1R1P14778 569 aa20.21■□□□□ 0.83
COL2A1-206ENST00000483376 STRIP1Q5VSL9 837 aa20.21■□□□□ 0.83
COL2A1-206ENST00000483376 ZNF804AQ7Z570 1209 aa20.21■□□□□ 0.83
COL2A1-206ENST00000483376 RBM46Q8TBY0 533 aaKnown RBP20.21■□□□□ 0.83
COL2A1-206ENST00000483376 TAF1DQ9H5J8 278 aaPredicted RBP20.21■□□□□ 0.83
COL2A1-206ENST00000483376 CD209Q9NNX6 404 aa20.21■□□□□ 0.83
COL2A1-206ENST00000483376 GPRC5DQ9NZD1 345 aa20.21■□□□□ 0.83
COL2A1-206ENST00000483376 CEP126Q9P2H0 1117 aa20.21■□□□□ 0.83
COL2A1-206ENST00000483376 USP17L3A6NCW0 530 aa20.2■□□□□ 0.82
COL2A1-206ENST00000483376 USP17L4A6NCW7 530 aa20.2■□□□□ 0.82
COL2A1-206ENST00000483376 LMOD1P29536 600 aaPredicted RBP20.2■□□□□ 0.82
COL2A1-206ENST00000483376 USP17L1Q7RTZ2 530 aa20.2■□□□□ 0.82
COL2A1-206ENST00000483376 PNMA8AQ86V59 439 aaPredicted RBP20.2■□□□□ 0.82
COL2A1-206ENST00000483376 RPAP2Q8IXW5 612 aaPredicted RBP20.2■□□□□ 0.82
COL2A1-206ENST00000483376 AGBL3Q8NEM8 1001 aa20.2■□□□□ 0.82
COL2A1-206ENST00000483376 LPIN2Q92539 896 aa20.2■□□□□ 0.82
COL2A1-206ENST00000483376 SIL1Q9H173 461 aa20.2■□□□□ 0.82
COL2A1-206ENST00000483376 C1orf115Q9H7X2 142 aa20.2■□□□□ 0.82
COL2A1-206ENST00000483376 NOP58Q9Y2X3 529 aaKnown RBP20.2■□□□□ 0.82
COL2A1-206ENST00000483376 GMPSP49915 693 aaPredicted RBP20.19■□□□□ 0.82
COL2A1-206ENST00000483376 MMP14P50281 582 aa20.19■□□□□ 0.82
COL2A1-206ENST00000483376 RSBN1LQ6PCB5 846 aaPredicted RBP20.19■□□□□ 0.82
COL2A1-206ENST00000483376 FBXO33Q7Z6M2 555 aa20.19■□□□□ 0.82
COL2A1-206ENST00000483376 C16orf71Q8IYS4 520 aaPredicted RBP20.19■□□□□ 0.82
COL2A1-206ENST00000483376 FAM84BQ96KN1 310 aaPredicted RBP20.19■□□□□ 0.82
COL2A1-206ENST00000483376 KCNQ5Q9NR82 932 aa20.19■□□□□ 0.82
COL2A1-206ENST00000483376 MYO3BQ8WXR4 1341 aa20.19■□□□□ 0.82
COL2A1-206ENST00000483376 IFIT1P09914 478 aaKnown RBP20.18■□□□□ 0.82
COL2A1-206ENST00000483376 EPHX2P34913 555 aa20.18■□□□□ 0.82
COL2A1-206ENST00000483376 GMLQ99445 158 aa20.18■□□□□ 0.82
COL2A1-206ENST00000483376 SLC5A1P13866 664 aa20.17■□□□□ 0.82
COL2A1-206ENST00000483376 HIBADHP31937 336 aaKnown RBP20.17■□□□□ 0.82
COL2A1-206ENST00000483376 FKBP1AP62942 108 aaKnown RBP20.17■□□□□ 0.82
COL2A1-206ENST00000483376 FSTL1Q12841 308 aa20.17■□□□□ 0.82
COL2A1-206ENST00000483376 DACT2Q5SW24 774 aa20.17■□□□□ 0.82
COL2A1-206ENST00000483376 USP50Q70EL3 339 aaPredicted RBP20.17■□□□□ 0.82
COL2A1-206ENST00000483376 TDRD7Q8NHU6 1098 aaKnown RBP20.17■□□□□ 0.82
COL2A1-206ENST00000483376 ADARB2Q9NS39 739 aaKnown RBP20.17■□□□□ 0.82
COL2A1-206ENST00000483376 ADAMTSL1Q8N6G6 1762 aa20.16■□□□□ 0.82
COL2A1-206ENST00000483376 ZNF646O15015 1829 aaPredicted RBP20.16■□□□□ 0.82
COL2A1-206ENST00000483376 SASH1O94885 1247 aa20.16■□□□□ 0.82
COL2A1-206ENST00000483376 EPS15P42566 896 aa20.16■□□□□ 0.82
COL2A1-206ENST00000483376 C1QTNF8P60827 252 aa20.16■□□□□ 0.82
COL2A1-206ENST00000483376 G3BP1Q13283 466 aaKnown RBP eCLIP20.16■□□□□ 0.82
COL2A1-206ENST00000483376 CAVIN4Q5BKX8 364 aa20.16■□□□□ 0.82
COL2A1-206ENST00000483376 LDHDQ86WU2 507 aa20.16■□□□□ 0.82
COL2A1-206ENST00000483376 AKAP2Q9Y2D5 859 aa20.16■□□□□ 0.82
COL2A1-206ENST00000483376 FAM205AQ6ZU69 1335 aa20.16■□□□□ 0.82
COL2A1-206ENST00000483376 ATP2B3Q16720 1220 aa20.15■□□□□ 0.82
COL2A1-206ENST00000483376 TTLL5Q6EMB2 1281 aa20.15■□□□□ 0.82
COL2A1-206ENST00000483376 SMC1BQ8NDV3 1235 aa20.15■□□□□ 0.82
COL2A1-206ENST00000483376 GPR108Q9NPR9 543 aa20.15■□□□□ 0.82
COL2A1-206ENST00000483376 ZBTB12Q9Y330 459 aaPredicted RBP20.15■□□□□ 0.82
COL2A1-206ENST00000483376 H7C1D1 291 aa20.14■□□□□ 0.81
COL2A1-206ENST00000483376 HMMRO75330 724 aa20.14■□□□□ 0.81
COL2A1-206ENST00000483376 GYG1P46976 350 aa20.14■□□□□ 0.81
COL2A1-206ENST00000483376 ZNF280AP59817 542 aaPredicted RBP20.14■□□□□ 0.81
COL2A1-206ENST00000483376 CNOT7Q9UIV1 285 aaKnown RBP20.14■□□□□ 0.81
COL2A1-206ENST00000483376 HSP90AB4PQ58FF6 505 aa20.13■□□□□ 0.81
COL2A1-206ENST00000483376 MICALL2Q8IY33 904 aa20.13■□□□□ 0.81
COL2A1-206ENST00000483376 SURF6O75683 361 aaKnown RBP20.12■□□□□ 0.81
COL2A1-206ENST00000483376 GTF2IP78347 998 aa20.12■□□□□ 0.81
COL2A1-206ENST00000483376 TFCP2Q12800 502 aa20.12■□□□□ 0.81
COL2A1-206ENST00000483376 AAMPQ13685 434 aa20.12■□□□□ 0.81
COL2A1-206ENST00000483376 VPS37DQ86XT2 251 aa20.12■□□□□ 0.81
COL2A1-206ENST00000483376 SIRT2Q8IXJ6 389 aa20.12■□□□□ 0.81
COL2A1-206ENST00000483376 ZC3H15Q8WU90 426 aaKnown RBP20.12■□□□□ 0.81
COL2A1-206ENST00000483376 PGAP2Q9UHJ9 254 aa20.12■□□□□ 0.81
COL2A1-206ENST00000483376 ARAP2Q8WZ64 1704 aa20.12■□□□□ 0.81
COL2A1-206ENST00000483376 CHADLQ6NUI6 762 aa20.11■□□□□ 0.81
COL2A1-206ENST00000483376 ERC1Q8IUD2 1116 aa20.11■□□□□ 0.81
COL2A1-206ENST00000483376 A0A1B0GUL7 405 aa20.1■□□□□ 0.81
COL2A1-206ENST00000483376 SEMA3EO15041 775 aa20.1■□□□□ 0.81
COL2A1-206ENST00000483376 USP17L8P0C7I0 530 aa20.1■□□□□ 0.81
COL2A1-206ENST00000483376 BCAMP50895 628 aa20.1■□□□□ 0.81
COL2A1-206ENST00000483376 POTEIP0CG38 1075 aa20.09■□□□□ 0.81
COL2A1-206ENST00000483376 POTEJP0CG39 1038 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms