RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 TTC39AQ5SRH9 613 aa18.35■□□□□ 0.53
PHGDH-205ENST00000482968 LEMD3Q9Y2U8 911 aa18.35■□□□□ 0.53
PHGDH-205ENST00000482968 SDSP20132 328 aa18.35■□□□□ 0.53
PHGDH-205ENST00000482968 CCDC102BQ68D86 513 aa18.35■□□□□ 0.53
PHGDH-205ENST00000482968 WWC3Q9ULE0 1092 aa18.35■□□□□ 0.53
PHGDH-205ENST00000482968 PHKA1P46020 1223 aa18.34■□□□□ 0.53
PHGDH-205ENST00000482968 BCAMP50895 628 aa18.34■□□□□ 0.53
PHGDH-205ENST00000482968 RILPL2Q969X0 211 aa18.34■□□□□ 0.53
PHGDH-205ENST00000482968 PODXL2Q9NZ53 605 aa18.34■□□□□ 0.53
PHGDH-205ENST00000482968 PIM2Q9P1W9 311 aa18.34■□□□□ 0.53
PHGDH-205ENST00000482968 GGA1Q9UJY5 639 aa18.34■□□□□ 0.53
PHGDH-205ENST00000482968 SOCS7O14512 581 aa18.33■□□□□ 0.53
PHGDH-205ENST00000482968 UFL1O94874 794 aa18.33■□□□□ 0.53
PHGDH-205ENST00000482968 ATP2B4P23634 1241 aa18.33■□□□□ 0.53
PHGDH-205ENST00000482968 KLRK1P26718 216 aa18.33■□□□□ 0.53
PHGDH-205ENST00000482968 GYG1P46976 350 aa18.33■□□□□ 0.53
PHGDH-205ENST00000482968 MPNDQ8N594 471 aa18.33■□□□□ 0.53
PHGDH-205ENST00000482968 NDUFB9Q9Y6M9 179 aa18.33■□□□□ 0.53
PHGDH-205ENST00000482968 DLEC1Q9Y238 1755 aa18.33■□□□□ 0.52
PHGDH-205ENST00000482968 C6orf229H3BNL8 230 aa18.32■□□□□ 0.52
PHGDH-205ENST00000482968 C21orf2O43822 256 aa18.32■□□□□ 0.52
PHGDH-205ENST00000482968 CAVIN4Q5BKX8 364 aa18.32■□□□□ 0.52
PHGDH-205ENST00000482968 TBC1D16Q8TBP0 767 aa18.32■□□□□ 0.52
PHGDH-205ENST00000482968 C7orf43Q8WVR3 580 aa18.32■□□□□ 0.52
PHGDH-205ENST00000482968 GPR101Q96P66 508 aaPredicted RBP18.32■□□□□ 0.52
PHGDH-205ENST00000482968 POLLQ9UGP5 575 aa18.32■□□□□ 0.52
PHGDH-205ENST00000482968 DPP8Q6V1X1 898 aaPredicted RBP18.32■□□□□ 0.52
PHGDH-205ENST00000482968 TXNRD3Q86VQ6 643 aa18.32■□□□□ 0.52
PHGDH-205ENST00000482968 VPS37DQ86XT2 251 aa18.32■□□□□ 0.52
PHGDH-205ENST00000482968 FAM84BQ96KN1 310 aaPredicted RBP18.32■□□□□ 0.52
PHGDH-205ENST00000482968 DNAJC2Q99543 621 aaKnown RBP18.32■□□□□ 0.52
PHGDH-205ENST00000482968 LRRC37AA6NMS7 1700 aa18.31■□□□□ 0.52
PHGDH-205ENST00000482968 SCARF1Q14162 830 aa18.31■□□□□ 0.52
PHGDH-205ENST00000482968 SNRKQ9NRH2 765 aa18.31■□□□□ 0.52
PHGDH-205ENST00000482968 ARAP2Q8WZ64 1704 aa18.31■□□□□ 0.52
PHGDH-205ENST00000482968 KIAA1551Q9HCM1 1747 aa18.31■□□□□ 0.52
PHGDH-205ENST00000482968 FKBP4Q02790 459 aaKnown RBP eCLIP18.3■□□□□ 0.52
PHGDH-205ENST00000482968 EDC3Q96F86 508 aaKnown RBP18.3■□□□□ 0.52
PHGDH-205ENST00000482968 HAUS7Q99871 368 aa18.3■□□□□ 0.52
PHGDH-205ENST00000482968 UQCRFS1P1P0C7P4 283 aa18.3■□□□□ 0.52
PHGDH-205ENST00000482968 MCAMP43121 646 aa18.3■□□□□ 0.52
PHGDH-205ENST00000482968 FBXO33Q7Z6M2 555 aa18.3■□□□□ 0.52
PHGDH-205ENST00000482968 CNTROBQ8N137 903 aa18.3■□□□□ 0.52
PHGDH-205ENST00000482968 NLGN2Q8NFZ4 835 aa18.3■□□□□ 0.52
PHGDH-205ENST00000482968 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.3■□□□□ 0.52
PHGDH-205ENST00000482968 ZNF512BQ96KM6 892 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-205ENST00000482968 IQSEC3Q9UPP2 1182 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-205ENST00000482968 GOLGB1Q14789 3259 aaKnown RBP18.29■□□□□ 0.52
PHGDH-205ENST00000482968 ARID4AP29374 1257 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-205ENST00000482968 HIBADHP31937 336 aaKnown RBP18.29■□□□□ 0.52
PHGDH-205ENST00000482968 DALRD3Q5D0E6 543 aaKnown RBP18.29■□□□□ 0.52
PHGDH-205ENST00000482968 PI16Q6UXB8 463 aa18.29■□□□□ 0.52
PHGDH-205ENST00000482968 IRS2Q9Y4H2 1338 aa18.28■□□□□ 0.52
PHGDH-205ENST00000482968 C8orf34Q49A92 452 aa18.28■□□□□ 0.52
PHGDH-205ENST00000482968 CC2D2BQ6DHV5 1058 aa18.28■□□□□ 0.52
PHGDH-205ENST00000482968 EVI5LQ96CN4 794 aa18.28■□□□□ 0.52
PHGDH-205ENST00000482968 FHDC1Q9C0D6 1143 aaPredicted RBP18.28■□□□□ 0.52
PHGDH-205ENST00000482968 GNL3LQ9NVN8 582 aaKnown RBP18.28■□□□□ 0.52
PHGDH-205ENST00000482968 GOLIM4O00461 696 aa18.27■□□□□ 0.52
PHGDH-205ENST00000482968 RIMBP2O15034 1052 aa18.27■□□□□ 0.52
PHGDH-205ENST00000482968 ZAP70P43403 619 aa18.27■□□□□ 0.52
PHGDH-205ENST00000482968 PAG1Q9NWQ8 432 aa18.27■□□□□ 0.52
PHGDH-205ENST00000482968 LTBP1Q14766 1721 aa18.27■□□□□ 0.52
PHGDH-205ENST00000482968 FRAT2O75474 233 aaPredicted RBP18.27■□□□□ 0.51
PHGDH-205ENST00000482968 RASGRF1Q13972 1273 aa18.27■□□□□ 0.51
PHGDH-205ENST00000482968 C15orf52Q6ZUT6 534 aaKnown RBP18.27■□□□□ 0.51
PHGDH-205ENST00000482968 ZC3H12CQ9C0D7 883 aaKnown RBP18.27■□□□□ 0.51
PHGDH-205ENST00000482968 HMG20BQ9P0W2 317 aa18.27■□□□□ 0.51
PHGDH-205ENST00000482968 AK9Q5TCS8 1911 aa18.26■□□□□ 0.51
PHGDH-205ENST00000482968 AKAP11Q9UKA4 1901 aa18.26■□□□□ 0.51
PHGDH-205ENST00000482968 WASHC4Q2M389 1173 aa18.26■□□□□ 0.51
PHGDH-205ENST00000482968 SPATA5Q8NB90 893 aa18.26■□□□□ 0.51
PHGDH-205ENST00000482968 ANTXR1Q9H6X2 564 aa18.26■□□□□ 0.51
PHGDH-205ENST00000482968 BCS1LQ9Y276 419 aa18.26■□□□□ 0.51
PHGDH-205ENST00000482968 CDC45O75419 566 aa18.25■□□□□ 0.51
PHGDH-205ENST00000482968 CCDC93Q567U6 631 aa18.25■□□□□ 0.51
PHGDH-205ENST00000482968 ZNF804AQ7Z570 1209 aa18.25■□□□□ 0.51
PHGDH-205ENST00000482968 BRCA1P38398 1863 aaKnown RBP18.25■□□□□ 0.51
PHGDH-205ENST00000482968 TBC1D9Q6ZT07 1266 aa18.25■□□□□ 0.51
PHGDH-205ENST00000482968 RTKN2Q8IZC4 609 aa18.25■□□□□ 0.51
PHGDH-205ENST00000482968 EYA3Q99504 573 aa18.25■□□□□ 0.51
PHGDH-205ENST00000482968 FSD1Q9BTV5 496 aa18.25■□□□□ 0.51
PHGDH-205ENST00000482968 BACH2Q9BYV9 841 aa18.25■□□□□ 0.51
PHGDH-205ENST00000482968 MED23Q9ULK4 1368 aa18.24■□□□□ 0.51
PHGDH-205ENST00000482968 DUOX1Q9NRD9 1551 aa18.24■□□□□ 0.51
PHGDH-205ENST00000482968 CYP2E1P05181 493 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-205ENST00000482968 GRIPAP1Q4V328 841 aa18.24■□□□□ 0.51
PHGDH-205ENST00000482968 RTFDC1Q9BY42 306 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-205ENST00000482968 SYT17Q9BSW7 474 aa18.23■□□□□ 0.51
PHGDH-205ENST00000482968 CD209Q9NNX6 404 aa18.23■□□□□ 0.51
PHGDH-205ENST00000482968 DENND2AQ9ULE3 1009 aa18.23■□□□□ 0.51
PHGDH-205ENST00000482968 G3V3G9 751 aa18.22■□□□□ 0.51
PHGDH-205ENST00000482968 CHMLP26374 656 aa18.22■□□□□ 0.51
PHGDH-205ENST00000482968 DCAF8Q5TAQ9 597 aa18.22■□□□□ 0.51
PHGDH-205ENST00000482968 SOGA3Q5TF21 947 aa18.22■□□□□ 0.51
PHGDH-205ENST00000482968 KBTBD3Q8NAB2 608 aa18.22■□□□□ 0.51
PHGDH-205ENST00000482968 TDRD7Q8NHU6 1098 aaKnown RBP18.22■□□□□ 0.51
PHGDH-205ENST00000482968 DOK7Q18PE1 504 aa18.22■□□□□ 0.51
PHGDH-205ENST00000482968 CASC1Q6TDU7 716 aa18.22■□□□□ 0.51
PHGDH-205ENST00000482968 ERICH6Q7L0X2 663 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms