RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 NEFLP07196 543 aa11.93□□□□□ -0.5
CD46-214ENST00000480003 ATG9AQ7Z3C6 839 aa11.93□□□□□ -0.5
CD46-214ENST00000480003 SP8Q8IXZ3 490 aa11.93□□□□□ -0.5
CD46-214ENST00000480003 PUS3Q9BZE2 481 aaKnown RBP11.93□□□□□ -0.5
CD46-214ENST00000480003 DCTPP1Q9H773 170 aa11.93□□□□□ -0.5
CD46-214ENST00000480003 EYA2O00167 538 aa11.92□□□□□ -0.5
CD46-214ENST00000480003 HMMRO75330 724 aa11.92□□□□□ -0.5
CD46-214ENST00000480003 IGHMBP2P38935 993 aaKnown RBP11.92□□□□□ -0.5
CD46-214ENST00000480003 LRRC24Q50LG9 513 aa11.92□□□□□ -0.5
CD46-214ENST00000480003 LDHAL6AQ6ZMR3 332 aa11.92□□□□□ -0.5
CD46-214ENST00000480003 TMC4Q7Z404 712 aa11.92□□□□□ -0.5
CD46-214ENST00000480003 MINPP1Q9UNW1 487 aa11.92□□□□□ -0.5
CD46-214ENST00000480003 ATP6V0A2Q9Y487 856 aa11.92□□□□□ -0.5
CD46-214ENST00000480003 TNRC6CQ9HCJ0 1690 aaKnown RBP11.91□□□□□ -0.5
CD46-214ENST00000480003 CIAO1O76071 339 aa11.91□□□□□ -0.5
CD46-214ENST00000480003 DALRD3Q5D0E6 543 aaKnown RBP11.91□□□□□ -0.5
CD46-214ENST00000480003 PRPF40BQ6NWY9 871 aaKnown RBP11.91□□□□□ -0.5
CD46-214ENST00000480003 MPHOSPH8Q99549 860 aa11.91□□□□□ -0.5
CD46-214ENST00000480003 RWDD1Q9H446 243 aaPredicted RBP11.91□□□□□ -0.5
CD46-214ENST00000480003 SURF6O75683 361 aaKnown RBP11.9□□□□□ -0.5
CD46-214ENST00000480003 SASH1O94885 1247 aa11.9□□□□□ -0.5
CD46-214ENST00000480003 G3BP1Q13283 466 aaKnown RBP eCLIP11.9□□□□□ -0.5
CD46-214ENST00000480003 TAF7LQ5H9L4 462 aa11.9□□□□□ -0.5
CD46-214ENST00000480003 CC2D2BQ6DHV5 1058 aa11.9□□□□□ -0.5
CD46-214ENST00000480003 ZNF784Q8NCA9 323 aaPredicted RBP11.9□□□□□ -0.5
CD46-214ENST00000480003 COL4A1P02462 1669 aa11.9□□□□□ -0.5
CD46-214ENST00000480003 LAMB2P55268 1798 aa11.9□□□□□ -0.51
CD46-214ENST00000480003 PPEF1O14829 653 aaPredicted RBP11.89□□□□□ -0.51
CD46-214ENST00000480003 IL15P40933 162 aaPredicted RBP11.89□□□□□ -0.51
CD46-214ENST00000480003 CHRNDQ07001 517 aa11.89□□□□□ -0.51
CD46-214ENST00000480003 OLFM4Q6UX06 510 aa11.89□□□□□ -0.51
CD46-214ENST00000480003 TMEM92Q6UXU6 159 aa11.89□□□□□ -0.51
CD46-214ENST00000480003 SLC51AQ86UW1 340 aa11.89□□□□□ -0.51
CD46-214ENST00000480003 VGLL2Q8N8G2 317 aa11.89□□□□□ -0.51
CD46-214ENST00000480003 CNNM1Q9NRU3 951 aa11.89□□□□□ -0.51
CD46-214ENST00000480003 PODXL2Q9NZ53 605 aa11.89□□□□□ -0.51
CD46-214ENST00000480003 PCDH10Q9P2E7 1040 aa11.89□□□□□ -0.51
CD46-214ENST00000480003 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.89□□□□□ -0.51
CD46-214ENST00000480003 MYH3P11055 1940 aa11.89□□□□□ -0.51
CD46-214ENST00000480003 KIAA1551Q9HCM1 1747 aa11.89□□□□□ -0.51
CD46-214ENST00000480003 C21orf2O43822 256 aa11.88□□□□□ -0.51
CD46-214ENST00000480003 RAB11FIP3O75154 756 aa11.88□□□□□ -0.51
CD46-214ENST00000480003 GRIPAP1Q4V328 841 aa11.88□□□□□ -0.51
CD46-214ENST00000480003 HSP90AB4PQ58FF6 505 aa11.88□□□□□ -0.51
CD46-214ENST00000480003 SMC5Q8IY18 1101 aa11.88□□□□□ -0.51
CD46-214ENST00000480003 SIL1Q9H173 461 aa11.88□□□□□ -0.51
CD46-214ENST00000480003 PPP4R2Q9NY27 417 aa11.88□□□□□ -0.51
CD46-214ENST00000480003 BCS1LQ9Y276 419 aa11.88□□□□□ -0.51
CD46-214ENST00000480003 TAF1P21675 1872 aa11.88□□□□□ -0.51
CD46-214ENST00000480003 MROH5Q6ZUA9 1318 aa11.87□□□□□ -0.51
CD46-214ENST00000480003 WTIPA6NIX2 430 aaPredicted RBP11.87□□□□□ -0.51
CD46-214ENST00000480003 PDE8BO95263 885 aa11.87□□□□□ -0.51
CD46-214ENST00000480003 FGFR2P21802 821 aa11.87□□□□□ -0.51
CD46-214ENST00000480003 GPSM2P81274 684 aa11.87□□□□□ -0.51
CD46-214ENST00000480003 HELBQ8NG08 1087 aaPredicted RBP11.87□□□□□ -0.51
CD46-214ENST00000480003 RHPN1Q8TCX5 695 aa11.87□□□□□ -0.51
CD46-214ENST00000480003 GCC1Q96CN9 775 aa11.87□□□□□ -0.51
CD46-214ENST00000480003 RTFDC1Q9BY42 306 aaPredicted RBP11.87□□□□□ -0.51
CD46-214ENST00000480003 ANKRD2Q9GZV1 360 aa11.87□□□□□ -0.51
CD46-214ENST00000480003 GPR108Q9NPR9 543 aa11.87□□□□□ -0.51
CD46-214ENST00000480003 PLSCR2Q9NRY7 297 aa11.87□□□□□ -0.51
CD46-214ENST00000480003 CEP126Q9P2H0 1117 aa11.87□□□□□ -0.51
CD46-214ENST00000480003 EXOC6BQ9Y2D4 811 aa11.87□□□□□ -0.51
CD46-214ENST00000480003 SLX4Q8IY92 1834 aa11.87□□□□□ -0.51
CD46-214ENST00000480003 SNED1Q8TER0 1413 aa11.86□□□□□ -0.51
CD46-214ENST00000480003 TAF5LO75529 589 aa11.86□□□□□ -0.51
CD46-214ENST00000480003 TFCP2Q12800 502 aa11.86□□□□□ -0.51
CD46-214ENST00000480003 UBE4AQ14139 1066 aa11.86□□□□□ -0.51
CD46-214ENST00000480003 SOGA3Q5TF21 947 aa11.86□□□□□ -0.51
CD46-214ENST00000480003 RTKN2Q8IZC4 609 aa11.86□□□□□ -0.51
CD46-214ENST00000480003 MPNDQ8N594 471 aa11.86□□□□□ -0.51
CD46-214ENST00000480003 POLLQ9UGP5 575 aa11.86□□□□□ -0.51
CD46-214ENST00000480003 WWC3Q9ULE0 1092 aa11.86□□□□□ -0.51
CD46-214ENST00000480003 NSFL1CQ9UNZ2 370 aaKnown RBP11.86□□□□□ -0.51
CD46-214ENST00000480003 LEMD3Q9Y2U8 911 aa11.86□□□□□ -0.51
CD46-214ENST00000480003 COL11A2P13942 1736 aaPredicted RBP11.86□□□□□ -0.51
CD46-214ENST00000480003 SNAP23O00161 211 aa11.85□□□□□ -0.51
CD46-214ENST00000480003 HOXB3P14651 431 aaPredicted RBP11.85□□□□□ -0.51
CD46-214ENST00000480003 YBX3P16989 372 aaKnown RBP eCLIP11.85□□□□□ -0.51
CD46-214ENST00000480003 ATP2B4P23634 1241 aa11.85□□□□□ -0.51
CD46-214ENST00000480003 METTL24Q5JXM2 366 aa11.85□□□□□ -0.51
CD46-214ENST00000480003 ERC1Q8IUD2 1116 aa11.85□□□□□ -0.51
CD46-214ENST00000480003 MARVELD3Q96A59 401 aa11.85□□□□□ -0.51
CD46-214ENST00000480003 KIF1BPQ96EK5 621 aa11.85□□□□□ -0.51
CD46-214ENST00000480003 XDHP47989 1333 aa11.85□□□□□ -0.51
CD46-214ENST00000480003 KDM2BQ8NHM5 1336 aa11.85□□□□□ -0.51
CD46-214ENST00000480003 TIMM10P62072 90 aa11.84□□□□□ -0.51
CD46-214ENST00000480003 GPR162Q16538 588 aa11.84□□□□□ -0.51
CD46-214ENST00000480003 CCDC93Q567U6 631 aa11.84□□□□□ -0.51
CD46-214ENST00000480003 C15orf52Q6ZUT6 534 aaKnown RBP11.84□□□□□ -0.51
CD46-214ENST00000480003 TBC1D16Q8TBP0 767 aa11.84□□□□□ -0.51
CD46-214ENST00000480003 PSMD1Q99460 953 aa11.84□□□□□ -0.51
CD46-214ENST00000480003 TMX4Q9H1E5 349 aaPredicted RBP11.84□□□□□ -0.51
CD46-214ENST00000480003 VPS33BQ9H267 617 aa11.84□□□□□ -0.51
CD46-214ENST00000480003 ANKIB1Q9P2G1 1089 aa11.84□□□□□ -0.51
CD46-214ENST00000480003 GGA1Q9UJY5 639 aa11.84□□□□□ -0.51
CD46-214ENST00000480003 IRS2Q9Y4H2 1338 aa11.84□□□□□ -0.51
CD46-214ENST00000480003 DLEC1Q9Y238 1755 aa11.83□□□□□ -0.52
CD46-214ENST00000480003 NFKBIEO00221 500 aa11.83□□□□□ -0.52
CD46-214ENST00000480003 FKBP4Q02790 459 aaKnown RBP eCLIP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms