RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 LTBP3Q9NS15 1303 aa14.41□□□□□ -0.1
TRAPPC12-219ENST00000479955 G3V3G9 751 aa14.41□□□□□ -0.1
TRAPPC12-219ENST00000479955 SMARCA5O60264 1052 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC12-219ENST00000479955 DCAF8Q5TAQ9 597 aa14.41□□□□□ -0.1
TRAPPC12-219ENST00000479955 OLFM4Q6UX06 510 aa14.41□□□□□ -0.1
TRAPPC12-219ENST00000479955 ARHGAP27Q6ZUM4 889 aa14.41□□□□□ -0.1
TRAPPC12-219ENST00000479955 VPS37DQ86XT2 251 aa14.41□□□□□ -0.1
TRAPPC12-219ENST00000479955 XAGE2Q96GT9 111 aa14.41□□□□□ -0.1
TRAPPC12-219ENST00000479955 LNPKQ9C0E8 428 aa14.41□□□□□ -0.1
TRAPPC12-219ENST00000479955 GNL3LQ9NVN8 582 aaKnown RBP14.41□□□□□ -0.1
TRAPPC12-219ENST00000479955 MED23Q9ULK4 1368 aa14.41□□□□□ -0.1
TRAPPC12-219ENST00000479955 A0A1B0GUL6 1792 aa14.41□□□□□ -0.1
TRAPPC12-219ENST00000479955 HIBADHP31937 336 aaKnown RBP14.4□□□□□ -0.1
TRAPPC12-219ENST00000479955 ZNF804AQ7Z570 1209 aa14.4□□□□□ -0.1
TRAPPC12-219ENST00000479955 CCDC8Q9H0W5 538 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC12-219ENST00000479955 BCL11AQ9H165 835 aa14.4□□□□□ -0.1
TRAPPC12-219ENST00000479955 ZNF609O15014 1411 aa14.4□□□□□ -0.1
TRAPPC12-219ENST00000479955 LTBP1Q14766 1721 aa14.39□□□□□ -0.11
TRAPPC12-219ENST00000479955 UQCRFS1P1P0C7P4 283 aa14.39□□□□□ -0.11
TRAPPC12-219ENST00000479955 COA1Q9GZY4 146 aa14.39□□□□□ -0.11
TRAPPC12-219ENST00000479955 FER1L6Q2WGJ9 1857 aa14.39□□□□□ -0.11
TRAPPC12-219ENST00000479955 SNED1Q8TER0 1413 aa14.39□□□□□ -0.11
TRAPPC12-219ENST00000479955 TTC41PQ6P2S7 1318 aa14.39□□□□□ -0.11
TRAPPC12-219ENST00000479955 SEMA3EO15041 775 aa14.38□□□□□ -0.11
TRAPPC12-219ENST00000479955 ERC2O15083 957 aa14.38□□□□□ -0.11
TRAPPC12-219ENST00000479955 ZBTB22O15209 634 aa14.38□□□□□ -0.11
TRAPPC12-219ENST00000479955 KIAA2012Q0VF49 1180 aa14.38□□□□□ -0.11
TRAPPC12-219ENST00000479955 FBXO33Q7Z6M2 555 aa14.38□□□□□ -0.11
TRAPPC12-219ENST00000479955 ZNF512BQ96KM6 892 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC12-219ENST00000479955 DBNDD2Q9BQY9 259 aa14.38□□□□□ -0.11
TRAPPC12-219ENST00000479955 ECHDC1Q9NTX5 307 aa14.38□□□□□ -0.11
TRAPPC12-219ENST00000479955 DBNLQ9UJU6 430 aaKnown RBP14.38□□□□□ -0.11
TRAPPC12-219ENST00000479955 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC12-219ENST00000479955 SNAP23O00161 211 aa14.37□□□□□ -0.11
TRAPPC12-219ENST00000479955 RIMBP2O15034 1052 aa14.37□□□□□ -0.11
TRAPPC12-219ENST00000479955 PPIP5K2O43314 1243 aa14.37□□□□□ -0.11
TRAPPC12-219ENST00000479955 YBX3P16989 372 aaKnown RBP eCLIP14.37□□□□□ -0.11
TRAPPC12-219ENST00000479955 MX1P20591 662 aa14.37□□□□□ -0.11
TRAPPC12-219ENST00000479955 IARSP41252 1262 aaKnown RBP14.37□□□□□ -0.11
TRAPPC12-219ENST00000479955 TTC39AQ5SRH9 613 aa14.37□□□□□ -0.11
TRAPPC12-219ENST00000479955 CCDC102BQ68D86 513 aa14.37□□□□□ -0.11
TRAPPC12-219ENST00000479955 PODNQ7Z5L7 613 aa14.37□□□□□ -0.11
TRAPPC12-219ENST00000479955 C16orf71Q8IYS4 520 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC12-219ENST00000479955 LARGE2Q8N3Y3 721 aa14.37□□□□□ -0.11
TRAPPC12-219ENST00000479955 JDP2Q8WYK2 163 aa14.37□□□□□ -0.11
TRAPPC12-219ENST00000479955 FAM84BQ96KN1 310 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC12-219ENST00000479955 ARAP2Q8WZ64 1704 aa14.37□□□□□ -0.11
TRAPPC12-219ENST00000479955 DUOX1Q9NRD9 1551 aa14.36□□□□□ -0.11
TRAPPC12-219ENST00000479955 NFKBIEO00221 500 aa14.36□□□□□ -0.11
TRAPPC12-219ENST00000479955 FRAT2O75474 233 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC12-219ENST00000479955 LMNB1P20700 586 aa14.36□□□□□ -0.11
TRAPPC12-219ENST00000479955 ADORA1P30542 326 aa14.36□□□□□ -0.11
TRAPPC12-219ENST00000479955 GYG1P46976 350 aa14.36□□□□□ -0.11
TRAPPC12-219ENST00000479955 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.36□□□□□ -0.11
TRAPPC12-219ENST00000479955 CD209Q9NNX6 404 aa14.36□□□□□ -0.11
TRAPPC12-219ENST00000479955 ZNF277Q9NRM2 450 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC12-219ENST00000479955 STAP2Q9UGK3 403 aa14.36□□□□□ -0.11
TRAPPC12-219ENST00000479955 AOX1Q06278 1338 aa14.36□□□□□ -0.11
TRAPPC12-219ENST00000479955 IRS2Q9Y4H2 1338 aa14.36□□□□□ -0.11
TRAPPC12-219ENST00000479955 WTIPA6NIX2 430 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC12-219ENST00000479955 GLRX3O76003 335 aaKnown RBP14.35□□□□□ -0.11
TRAPPC12-219ENST00000479955 IL1R1P14778 569 aa14.35□□□□□ -0.11
TRAPPC12-219ENST00000479955 ATP5JP18859 108 aa14.35□□□□□ -0.11
TRAPPC12-219ENST00000479955 BCAMP50895 628 aa14.35□□□□□ -0.11
TRAPPC12-219ENST00000479955 SLC51AQ86UW1 340 aa14.35□□□□□ -0.11
TRAPPC12-219ENST00000479955 TXNRD3Q86VQ6 643 aa14.35□□□□□ -0.11
TRAPPC12-219ENST00000479955 NIM1KQ8IY84 436 aa14.35□□□□□ -0.11
TRAPPC12-219ENST00000479955 OSBPL3Q9H4L5 887 aa14.35□□□□□ -0.11
TRAPPC12-219ENST00000479955 DENND2AQ9ULE3 1009 aa14.35□□□□□ -0.11
TRAPPC12-219ENST00000479955 KLRK1P26718 216 aa14.34□□□□□ -0.11
TRAPPC12-219ENST00000479955 ARID4AP29374 1257 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC12-219ENST00000479955 PDE1AP54750 535 aa14.34□□□□□ -0.11
TRAPPC12-219ENST00000479955 AOC3Q16853 763 aa14.34□□□□□ -0.11
TRAPPC12-219ENST00000479955 PLEKHM2Q8IWE5 1019 aa14.34□□□□□ -0.11
TRAPPC12-219ENST00000479955 TDRD7Q8NHU6 1098 aaKnown RBP14.34□□□□□ -0.11
TRAPPC12-219ENST00000479955 GPR101Q96P66 508 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC12-219ENST00000479955 TLR7Q9NYK1 1049 aaKnown RBP14.34□□□□□ -0.11
TRAPPC12-219ENST00000479955 ZNRF3Q9ULT6 936 aa14.34□□□□□ -0.11
TRAPPC12-219ENST00000479955 PHKA1P46020 1223 aa14.33□□□□□ -0.12
TRAPPC12-219ENST00000479955 DOK7Q18PE1 504 aa14.33□□□□□ -0.12
TRAPPC12-219ENST00000479955 PDS5AQ29RF7 1337 aaKnown RBP14.33□□□□□ -0.12
TRAPPC12-219ENST00000479955 SALL3Q9BXA9 1300 aa14.33□□□□□ -0.12
TRAPPC12-219ENST00000479955 ECE2O60344 883 aa14.32□□□□□ -0.12
TRAPPC12-219ENST00000479955 IGSF3O75054 1194 aa14.32□□□□□ -0.12
TRAPPC12-219ENST00000479955 PDE4AP27815 886 aa14.32□□□□□ -0.12
TRAPPC12-219ENST00000479955 ZGPATQ8N5A5 531 aaKnown RBP14.32□□□□□ -0.12
TRAPPC12-219ENST00000479955 SPATA5Q8NB90 893 aa14.32□□□□□ -0.12
TRAPPC12-219ENST00000479955 WDR66Q8TBY9 1149 aa14.32□□□□□ -0.12
TRAPPC12-219ENST00000479955 TBC1D22AQ8WUA7 517 aa14.32□□□□□ -0.12
TRAPPC12-219ENST00000479955 CHD4Q14839 1912 aa14.31□□□□□ -0.12
TRAPPC12-219ENST00000479955 RASSF7Q02833 373 aa14.31□□□□□ -0.12
TRAPPC12-219ENST00000479955 TTF1Q15361 905 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC12-219ENST00000479955 OTUD7AQ8TE49 926 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC12-219ENST00000479955 HAUS7Q99871 368 aa14.31□□□□□ -0.12
TRAPPC12-219ENST00000479955 DBNDD1Q9H9R9 158 aa14.31□□□□□ -0.12
TRAPPC12-219ENST00000479955 USP17L3A6NCW0 530 aa14.3□□□□□ -0.12
TRAPPC12-219ENST00000479955 USP17L4A6NCW7 530 aa14.3□□□□□ -0.12
TRAPPC12-219ENST00000479955 RGS3P49796 1198 aa14.3□□□□□ -0.12
TRAPPC12-219ENST00000479955 EIF6P56537 245 aaKnown RBP14.3□□□□□ -0.12
TRAPPC12-219ENST00000479955 TNIP1Q15025 636 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms