RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 LMOD1P29536 600 aaPredicted RBP19.28■□□□□ 0.68
C9orf3-217ENST00000479161 DOK7Q18PE1 504 aa19.28■□□□□ 0.68
C9orf3-217ENST00000479161 GPR101Q96P66 508 aaPredicted RBP19.28■□□□□ 0.68
C9orf3-217ENST00000479161 DDX19BQ9UMR2 479 aa19.28■□□□□ 0.68
C9orf3-217ENST00000479161 GJA3Q9Y6H8 435 aa19.28■□□□□ 0.68
C9orf3-217ENST00000479161 PSMD14O00487 310 aa19.27■□□□□ 0.68
C9orf3-217ENST00000479161 RAD17O75943 681 aa19.27■□□□□ 0.68
C9orf3-217ENST00000479161 EPHX2P34913 555 aa19.27■□□□□ 0.68
C9orf3-217ENST00000479161 IL15P40933 162 aaPredicted RBP19.27■□□□□ 0.68
C9orf3-217ENST00000479161 MVPQ14764 893 aaKnown RBP19.27■□□□□ 0.68
C9orf3-217ENST00000479161 LRRC24Q50LG9 513 aa19.27■□□□□ 0.68
C9orf3-217ENST00000479161 STRIP1Q5VSL9 837 aa19.27■□□□□ 0.68
C9orf3-217ENST00000479161 USP50Q70EL3 339 aaPredicted RBP19.27■□□□□ 0.68
C9orf3-217ENST00000479161 ATG9AQ7Z3C6 839 aa19.27■□□□□ 0.68
C9orf3-217ENST00000479161 TXNRD3Q86VQ6 643 aa19.27■□□□□ 0.68
C9orf3-217ENST00000479161 AGBL3Q8NEM8 1001 aa19.27■□□□□ 0.68
C9orf3-217ENST00000479161 HELBQ8NG08 1087 aaPredicted RBP19.27■□□□□ 0.68
C9orf3-217ENST00000479161 ADAMTSL1Q8N6G6 1762 aa19.27■□□□□ 0.67
C9orf3-217ENST00000479161 USP17L3A6NCW0 530 aa19.26■□□□□ 0.67
C9orf3-217ENST00000479161 USP17L4A6NCW7 530 aa19.26■□□□□ 0.67
C9orf3-217ENST00000479161 SRGAP3O43295 1099 aa19.26■□□□□ 0.67
C9orf3-217ENST00000479161 IL1R1P14778 569 aa19.26■□□□□ 0.67
C9orf3-217ENST00000479161 ATP8B2P98198 1209 aa19.26■□□□□ 0.67
C9orf3-217ENST00000479161 METTL24Q5JXM2 366 aa19.26■□□□□ 0.67
C9orf3-217ENST00000479161 USP17L1Q7RTZ2 530 aa19.26■□□□□ 0.67
C9orf3-217ENST00000479161 SMC1BQ8NDV3 1235 aa19.26■□□□□ 0.67
C9orf3-217ENST00000479161 PANK1Q8TE04 598 aa19.26■□□□□ 0.67
C9orf3-217ENST00000479161 MYO3BQ8WXR4 1341 aa19.25■□□□□ 0.67
C9orf3-217ENST00000479161 ZNF646O15015 1829 aaPredicted RBP19.25■□□□□ 0.67
C9orf3-217ENST00000479161 FGFR2P21802 821 aa19.25■□□□□ 0.67
C9orf3-217ENST00000479161 GMPSP49915 693 aaPredicted RBP19.25■□□□□ 0.67
C9orf3-217ENST00000479161 ZNF804AQ7Z570 1209 aa19.25■□□□□ 0.67
C9orf3-217ENST00000479161 LDHDQ86WU2 507 aa19.25■□□□□ 0.67
C9orf3-217ENST00000479161 KLHDC4Q8TBB5 520 aa19.25■□□□□ 0.67
C9orf3-217ENST00000479161 SSH3Q8TE77 659 aa19.25■□□□□ 0.67
C9orf3-217ENST00000479161 CD209Q9NNX6 404 aa19.25■□□□□ 0.67
C9orf3-217ENST00000479161 ADARB2Q9NS39 739 aaKnown RBP19.25■□□□□ 0.67
C9orf3-217ENST00000479161 FKBP1AP62942 108 aaKnown RBP19.24■□□□□ 0.67
C9orf3-217ENST00000479161 POLA2Q14181 598 aa19.24■□□□□ 0.67
C9orf3-217ENST00000479161 PUM3Q15397 648 aaKnown RBP19.24■□□□□ 0.67
C9orf3-217ENST00000479161 RSBN1LQ6PCB5 846 aaPredicted RBP19.24■□□□□ 0.67
C9orf3-217ENST00000479161 GMLQ99445 158 aa19.24■□□□□ 0.67
C9orf3-217ENST00000479161 KCNQ5Q9NR82 932 aa19.24■□□□□ 0.67
C9orf3-217ENST00000479161 FBXO33Q7Z6M2 555 aa19.23■□□□□ 0.67
C9orf3-217ENST00000479161 ZC3H15Q8WU90 426 aaKnown RBP19.23■□□□□ 0.67
C9orf3-217ENST00000479161 LPIN2Q92539 896 aa19.23■□□□□ 0.67
C9orf3-217ENST00000479161 ZBTB40Q9NUA8 1239 aa19.23■□□□□ 0.67
C9orf3-217ENST00000479161 CEP126Q9P2H0 1117 aa19.23■□□□□ 0.67
C9orf3-217ENST00000479161 CNOT7Q9UIV1 285 aaKnown RBP19.23■□□□□ 0.67
C9orf3-217ENST00000479161 H7C1D1 291 aa19.22■□□□□ 0.67
C9orf3-217ENST00000479161 SNAP23O00161 211 aa19.22■□□□□ 0.67
C9orf3-217ENST00000479161 PLIN1O60240 522 aa19.22■□□□□ 0.67
C9orf3-217ENST00000479161 SASH1O94885 1247 aa19.22■□□□□ 0.67
C9orf3-217ENST00000479161 KLRK1P26718 216 aa19.22■□□□□ 0.67
C9orf3-217ENST00000479161 EPS15P42566 896 aa19.22■□□□□ 0.67
C9orf3-217ENST00000479161 DACT2Q5SW24 774 aa19.22■□□□□ 0.67
C9orf3-217ENST00000479161 CHADLQ6NUI6 762 aa19.22■□□□□ 0.67
C9orf3-217ENST00000479161 TDRD7Q8NHU6 1098 aaKnown RBP19.22■□□□□ 0.67
C9orf3-217ENST00000479161 FAM84BQ96KN1 310 aaPredicted RBP19.22■□□□□ 0.67
C9orf3-217ENST00000479161 YTHDC1Q96MU7 727 aaKnown RBP19.22■□□□□ 0.67
C9orf3-217ENST00000479161 PGAP2Q9UHJ9 254 aa19.22■□□□□ 0.67
C9orf3-217ENST00000479161 PNMA6EA0A0J9YXQ4 647 aa19.21■□□□□ 0.67
C9orf3-217ENST00000479161 IFIT1P09914 478 aaKnown RBP19.21■□□□□ 0.67
C9orf3-217ENST00000479161 HIBADHP31937 336 aaKnown RBP19.21■□□□□ 0.67
C9orf3-217ENST00000479161 ZNF280AP59817 542 aaPredicted RBP19.21■□□□□ 0.67
C9orf3-217ENST00000479161 CAVIN4Q5BKX8 364 aa19.21■□□□□ 0.67
C9orf3-217ENST00000479161 TTLL5Q6EMB2 1281 aa19.21■□□□□ 0.67
C9orf3-217ENST00000479161 NOP58Q9Y2X3 529 aaKnown RBP19.21■□□□□ 0.67
C9orf3-217ENST00000479161 FAM205AQ6ZU69 1335 aa19.21■□□□□ 0.67
C9orf3-217ENST00000479161 RPAP2Q8IXW5 612 aaPredicted RBP19.2■□□□□ 0.66
C9orf3-217ENST00000479161 PA2G4Q9UQ80 394 aaKnown RBP19.2■□□□□ 0.66
C9orf3-217ENST00000479161 SLC5A1P13866 664 aa19.19■□□□□ 0.66
C9orf3-217ENST00000479161 CEP85Q6P2H3 762 aa19.19■□□□□ 0.66
C9orf3-217ENST00000479161 MICALL2Q8IY33 904 aa19.19■□□□□ 0.66
C9orf3-217ENST00000479161 AKAP2Q9Y2D5 859 aa19.19■□□□□ 0.66
C9orf3-217ENST00000479161 COG6Q9Y2V7 657 aa19.19■□□□□ 0.66
C9orf3-217ENST00000479161 ZBTB12Q9Y330 459 aaPredicted RBP19.19■□□□□ 0.66
C9orf3-217ENST00000479161 HSPA6P17066 643 aa19.18■□□□□ 0.66
C9orf3-217ENST00000479161 SIL1Q9H173 461 aa19.18■□□□□ 0.66
C9orf3-217ENST00000479161 USP17L8P0C7I0 530 aa19.17■□□□□ 0.66
C9orf3-217ENST00000479161 G3BP1Q13283 466 aaKnown RBP eCLIP19.17■□□□□ 0.66
C9orf3-217ENST00000479161 GPR108Q9NPR9 543 aa19.17■□□□□ 0.66
C9orf3-217ENST00000479161 ARAP2Q8WZ64 1704 aa19.17■□□□□ 0.66
C9orf3-217ENST00000479161 POTEIP0CG38 1075 aa19.16■□□□□ 0.66
C9orf3-217ENST00000479161 POTEJP0CG39 1038 aa19.16■□□□□ 0.66
C9orf3-217ENST00000479161 GYG1P46976 350 aa19.16■□□□□ 0.66
C9orf3-217ENST00000479161 RRP1P56182 461 aaKnown RBP19.16■□□□□ 0.66
C9orf3-217ENST00000479161 GTF2IP78347 998 aa19.16■□□□□ 0.66
C9orf3-217ENST00000479161 ATP2B3Q16720 1220 aa19.16■□□□□ 0.66
C9orf3-217ENST00000479161 EAPPQ56P03 285 aaPredicted RBP19.16■□□□□ 0.66
C9orf3-217ENST00000479161 VPS37DQ86XT2 251 aa19.16■□□□□ 0.66
C9orf3-217ENST00000479161 OGFOD1Q8N543 542 aa19.16■□□□□ 0.66
C9orf3-217ENST00000479161 ITGBL1O95965 494 aaPredicted RBP19.15■□□□□ 0.66
C9orf3-217ENST00000479161 C20orf194Q5TEA3 1177 aa19.15■□□□□ 0.66
C9orf3-217ENST00000479161 SEMA3EO15041 775 aa19.14■□□□□ 0.65
C9orf3-217ENST00000479161 HMMRO75330 724 aa19.14■□□□□ 0.65
C9orf3-217ENST00000479161 HIRAP54198 1017 aaPredicted RBP19.14■□□□□ 0.65
C9orf3-217ENST00000479161 HSP90AB4PQ58FF6 505 aa19.14■□□□□ 0.65
C9orf3-217ENST00000479161 TBC1D22AQ8WUA7 517 aa19.14■□□□□ 0.65
C9orf3-217ENST00000479161 C1orf115Q9H7X2 142 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms