RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 KSR2Q6VAB6 950 aa12.43□□□□□ -0.42
CCM2-210ENST00000478169 OGFOD1Q8N543 542 aa12.43□□□□□ -0.42
CCM2-210ENST00000478169 C8orf58Q8NAV2 365 aa12.43□□□□□ -0.42
CCM2-210ENST00000478169 TTLL11Q8NHH1 800 aa12.43□□□□□ -0.42
CCM2-210ENST00000478169 PCDH10Q9P2E7 1040 aa12.43□□□□□ -0.42
CCM2-210ENST00000478169 MINPP1Q9UNW1 487 aa12.43□□□□□ -0.42
CCM2-210ENST00000478169 MAP3K2Q9Y2U5 619 aa12.43□□□□□ -0.42
CCM2-210ENST00000478169 SOX10P56693 466 aa12.42□□□□□ -0.42
CCM2-210ENST00000478169 NEXNQ0ZGT2 675 aa12.42□□□□□ -0.42
CCM2-210ENST00000478169 DACT2Q5SW24 774 aa12.42□□□□□ -0.42
CCM2-210ENST00000478169 STRIP1Q5VSL9 837 aa12.42□□□□□ -0.42
CCM2-210ENST00000478169 COA1Q9GZY4 146 aa12.42□□□□□ -0.42
CCM2-210ENST00000478169 PI4KAP2A4QPH2 592 aa12.41□□□□□ -0.42
CCM2-210ENST00000478169 UBE2Q2LH0YL09 131 aa12.41□□□□□ -0.42
CCM2-210ENST00000478169 WNT10BO00744 389 aa12.41□□□□□ -0.42
CCM2-210ENST00000478169 IGKV5-2P06315 115 aa12.41□□□□□ -0.42
CCM2-210ENST00000478169 NF2P35240 595 aa12.41□□□□□ -0.42
CCM2-210ENST00000478169 TM4SF4P48230 202 aa12.41□□□□□ -0.42
CCM2-210ENST00000478169 CCT4P50991 539 aaKnown RBP12.41□□□□□ -0.42
CCM2-210ENST00000478169 NBPF9Q3BBW0 867 aa12.41□□□□□ -0.42
CCM2-210ENST00000478169 NOM1Q5C9Z4 860 aaKnown RBP12.41□□□□□ -0.42
CCM2-210ENST00000478169 MOB2Q70IA6 237 aa12.41□□□□□ -0.42
CCM2-210ENST00000478169 PI4KAP1Q8N8J0 262 aa12.41□□□□□ -0.42
CCM2-210ENST00000478169 PRKRIP1Q9H875 184 aaPredicted RBP12.41□□□□□ -0.42
CCM2-210ENST00000478169 LEMD3Q9Y2U8 911 aa12.41□□□□□ -0.42
CCM2-210ENST00000478169 WTIPA6NIX2 430 aaPredicted RBP12.4□□□□□ -0.42
CCM2-210ENST00000478169 IGHMBP2P38935 993 aaKnown RBP12.4□□□□□ -0.42
CCM2-210ENST00000478169 TTLL12Q14166 644 aaPredicted RBP12.4□□□□□ -0.42
CCM2-210ENST00000478169 STK31Q9BXU1 1019 aa12.4□□□□□ -0.42
CCM2-210ENST00000478169 GREM2Q9H772 168 aa12.4□□□□□ -0.42
CCM2-210ENST00000478169 HDAC9Q9UKV0 1011 aa12.4□□□□□ -0.42
CCM2-210ENST00000478169 SCAF8Q9UPN6 1271 aaKnown RBP12.4□□□□□ -0.42
CCM2-210ENST00000478169 NEURL1BA8MQ27 555 aa12.39□□□□□ -0.43
CCM2-210ENST00000478169 H7C1W4 665 aa12.39□□□□□ -0.43
CCM2-210ENST00000478169 TBC1D8O95759 1140 aa12.39□□□□□ -0.43
CCM2-210ENST00000478169 PRAMEF18Q5VWM3 479 aa12.39□□□□□ -0.43
CCM2-210ENST00000478169 TTLL5Q6EMB2 1281 aa12.39□□□□□ -0.43
CCM2-210ENST00000478169 TSPYL6Q8N831 410 aa12.39□□□□□ -0.43
CCM2-210ENST00000478169 ZNF296Q8WUU4 475 aaPredicted RBP12.39□□□□□ -0.43
CCM2-210ENST00000478169 PLA2G12BQ9BX93 195 aa12.39□□□□□ -0.43
CCM2-210ENST00000478169 ANKRD2Q9GZV1 360 aa12.39□□□□□ -0.43
CCM2-210ENST00000478169 HPS5Q9UPZ3 1129 aa12.39□□□□□ -0.43
CCM2-210ENST00000478169 ECM29Q5VYK3 1845 aa12.39□□□□□ -0.43
CCM2-210ENST00000478169 SREBF2Q12772 1141 aa12.38□□□□□ -0.43
CCM2-210ENST00000478169 CWF19L2Q2TBE0 894 aaKnown RBP12.38□□□□□ -0.43
CCM2-210ENST00000478169 ARMC9Q7Z3E5 817 aa12.38□□□□□ -0.43
CCM2-210ENST00000478169 TXNRD3Q86VQ6 643 aa12.38□□□□□ -0.43
CCM2-210ENST00000478169 APOBEC3FQ8IUX4 373 aaKnown RBP12.38□□□□□ -0.43
CCM2-210ENST00000478169 FBXW7Q969H0 707 aa12.38□□□□□ -0.43
CCM2-210ENST00000478169 MXD3Q9BW11 206 aa12.38□□□□□ -0.43
CCM2-210ENST00000478169 CFHR5Q9BXR6 569 aa12.38□□□□□ -0.43
CCM2-210ENST00000478169 ZNF804BA4D1E1 1349 aa12.37□□□□□ -0.43
CCM2-210ENST00000478169 GPR25O00155 361 aa12.37□□□□□ -0.43
CCM2-210ENST00000478169 UBE3BQ7Z3V4 1068 aa12.37□□□□□ -0.43
CCM2-210ENST00000478169 MPHOSPH8Q99549 860 aa12.37□□□□□ -0.43
CCM2-210ENST00000478169 COL1A1P02452 1464 aaPredicted RBP12.36□□□□□ -0.43
CCM2-210ENST00000478169 SASH1O94885 1247 aa12.36□□□□□ -0.43
CCM2-210ENST00000478169 ALDH1A1P00352 501 aa12.36□□□□□ -0.43
CCM2-210ENST00000478169 ITGA6P23229 1130 aa12.36□□□□□ -0.43
CCM2-210ENST00000478169 PTPN12Q05209 780 aaKnown RBP12.36□□□□□ -0.43
CCM2-210ENST00000478169 GCKRQ14397 625 aa12.36□□□□□ -0.43
CCM2-210ENST00000478169 LDLRAD1Q5T700 205 aa12.36□□□□□ -0.43
CCM2-210ENST00000478169 PRPF38BQ5VTL8 546 aaKnown RBP12.36□□□□□ -0.43
CCM2-210ENST00000478169 FBXO46Q6PJ61 603 aaPredicted RBP12.36□□□□□ -0.43
CCM2-210ENST00000478169 ZBED3Q96IU2 234 aaPredicted RBP12.36□□□□□ -0.43
CCM2-210ENST00000478169 LAMB1P07942 1786 aa12.35□□□□□ -0.43
CCM2-210ENST00000478169 FKTNO75072 461 aa12.35□□□□□ -0.43
CCM2-210ENST00000478169 SLC4A2P04920 1241 aa12.35□□□□□ -0.43
CCM2-210ENST00000478169 CSF1RP07333 972 aa12.35□□□□□ -0.43
CCM2-210ENST00000478169 INHBEP58166 350 aa12.35□□□□□ -0.43
CCM2-210ENST00000478169 GTF2IP78347 998 aa12.35□□□□□ -0.43
CCM2-210ENST00000478169 CCDC27Q2M243 656 aa12.35□□□□□ -0.43
CCM2-210ENST00000478169 TWISTNBQ3B726 338 aaPredicted RBP12.35□□□□□ -0.43
CCM2-210ENST00000478169 SPRYD7Q5W111 196 aa12.35□□□□□ -0.43
CCM2-210ENST00000478169 KIAA0825Q8IV33 1275 aa12.35□□□□□ -0.43
CCM2-210ENST00000478169 TSR2Q969E8 191 aaKnown RBP12.35□□□□□ -0.43
CCM2-210ENST00000478169 A0A1B0GUL6 1792 aa12.34□□□□□ -0.43
CCM2-210ENST00000478169 UNCXA6NJT0 531 aa12.34□□□□□ -0.43
CCM2-210ENST00000478169 KLRK1P26718 216 aa12.34□□□□□ -0.43
CCM2-210ENST00000478169 KCNJ4P48050 445 aa12.34□□□□□ -0.43
CCM2-210ENST00000478169 CASP7P55210 303 aa12.34□□□□□ -0.43
CCM2-210ENST00000478169 CHRNDQ07001 517 aa12.34□□□□□ -0.43
CCM2-210ENST00000478169 MKRN3Q13064 507 aaKnown RBP12.34□□□□□ -0.43
CCM2-210ENST00000478169 MAP3K11Q16584 847 aa12.34□□□□□ -0.43
CCM2-210ENST00000478169 C15orf52Q6ZUT6 534 aaKnown RBP12.34□□□□□ -0.43
CCM2-210ENST00000478169 G2E3Q7L622 706 aa12.34□□□□□ -0.43
CCM2-210ENST00000478169 MTMR14Q8NCE2 650 aa12.34□□□□□ -0.43
CCM2-210ENST00000478169 MYH16Q9H6N6 1097 aa12.34□□□□□ -0.43
CCM2-210ENST00000478169 CD209Q9NNX6 404 aa12.34□□□□□ -0.43
CCM2-210ENST00000478169 ANGEL1Q9UNK9 670 aaKnown RBP12.34□□□□□ -0.43
CCM2-210ENST00000478169 PPP2R3BQ9Y5P8 575 aa12.34□□□□□ -0.43
CCM2-210ENST00000478169 ANKRD18BA2A2Z9 1011 aa12.33□□□□□ -0.44
CCM2-210ENST00000478169 MANSC4A6NHS7 340 aaPredicted RBP12.33□□□□□ -0.44
CCM2-210ENST00000478169 FLIIQ13045 1269 aa12.33□□□□□ -0.44
CCM2-210ENST00000478169 MAPK8IP2Q13387 824 aaPredicted RBP12.33□□□□□ -0.44
CCM2-210ENST00000478169 PRKG1Q13976 671 aa12.33□□□□□ -0.44
CCM2-210ENST00000478169 DLGAP5Q15398 846 aa12.33□□□□□ -0.44
CCM2-210ENST00000478169 LINS1Q8NG48 757 aa12.33□□□□□ -0.44
CCM2-210ENST00000478169 SLC10A4Q96EP9 437 aa12.33□□□□□ -0.44
CCM2-210ENST00000478169 DEFB129Q9H1M3 183 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms