RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 SASH1O94885 1247 aa18.92■□□□□ 0.62
SEC13-215ENST00000477547 PDE8BO95263 885 aa18.92■□□□□ 0.62
SEC13-215ENST00000477547 LMNB1P20700 586 aa18.92■□□□□ 0.62
SEC13-215ENST00000477547 ATP2B4P23634 1241 aa18.92■□□□□ 0.62
SEC13-215ENST00000477547 TFCP2Q12800 502 aa18.92■□□□□ 0.62
SEC13-215ENST00000477547 PUM3Q15397 648 aaKnown RBP18.92■□□□□ 0.62
SEC13-215ENST00000477547 SUPT20HQ8NEM7 779 aa18.92■□□□□ 0.62
SEC13-215ENST00000477547 TBC1D16Q8TBP0 767 aa18.92■□□□□ 0.62
SEC13-215ENST00000477547 GPR101Q96P66 508 aaPredicted RBP18.92■□□□□ 0.62
SEC13-215ENST00000477547 PSMD1Q99460 953 aa18.92■□□□□ 0.62
SEC13-215ENST00000477547 ZNF804BA4D1E1 1349 aa18.92■□□□□ 0.62
SEC13-215ENST00000477547 MED23Q9ULK4 1368 aa18.92■□□□□ 0.62
SEC13-215ENST00000477547 ZNF646O15015 1829 aaPredicted RBP18.91■□□□□ 0.62
SEC13-215ENST00000477547 ERICH6BQ5W0A0 696 aa18.91■□□□□ 0.62
SEC13-215ENST00000477547 RTFDC1Q9BY42 306 aaPredicted RBP18.91■□□□□ 0.62
SEC13-215ENST00000477547 DCTPP1Q9H773 170 aa18.91■□□□□ 0.62
SEC13-215ENST00000477547 POLLQ9UGP5 575 aa18.91■□□□□ 0.62
SEC13-215ENST00000477547 LEMD3Q9Y2U8 911 aa18.91■□□□□ 0.62
SEC13-215ENST00000477547 ZC3H4Q9UPT8 1303 aaKnown RBP18.91■□□□□ 0.62
SEC13-215ENST00000477547 COL4A5P29400 1685 aa18.91■□□□□ 0.62
SEC13-215ENST00000477547 SCN9AQ15858 1988 aa18.9■□□□□ 0.62
SEC13-215ENST00000477547 POTECB2RU33 542 aa18.9■□□□□ 0.62
SEC13-215ENST00000477547 RAB11FIP3O75154 756 aa18.9■□□□□ 0.62
SEC13-215ENST00000477547 IGHDP01880 384 aa18.9■□□□□ 0.62
SEC13-215ENST00000477547 ATP2B3Q16720 1220 aa18.9■□□□□ 0.62
SEC13-215ENST00000477547 RHPN1Q8TCX5 695 aa18.9■□□□□ 0.62
SEC13-215ENST00000477547 KIF1BPQ96EK5 621 aa18.9■□□□□ 0.62
SEC13-215ENST00000477547 SNAP23O00161 211 aa18.89■□□□□ 0.61
SEC13-215ENST00000477547 KLRK1P26718 216 aa18.89■□□□□ 0.61
SEC13-215ENST00000477547 GCC1Q96CN9 775 aa18.89■□□□□ 0.61
SEC13-215ENST00000477547 EYA3Q99504 573 aa18.89■□□□□ 0.61
SEC13-215ENST00000477547 LRRCC1Q9C099 1032 aa18.89■□□□□ 0.61
SEC13-215ENST00000477547 ZNF277Q9NRM2 450 aaPredicted RBP18.89■□□□□ 0.61
SEC13-215ENST00000477547 MKRN1Q9UHC7 482 aaKnown RBP18.89■□□□□ 0.61
SEC13-215ENST00000477547 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.89■□□□□ 0.61
SEC13-215ENST00000477547 WTIPA6NIX2 430 aaPredicted RBP18.88■□□□□ 0.61
SEC13-215ENST00000477547 PPIP5K2O43314 1243 aa18.88■□□□□ 0.61
SEC13-215ENST00000477547 SLC5A1P13866 664 aa18.88■□□□□ 0.61
SEC13-215ENST00000477547 UBE4AQ14139 1066 aa18.88■□□□□ 0.61
SEC13-215ENST00000477547 CCDC136Q96JN2 1154 aa18.88■□□□□ 0.61
SEC13-215ENST00000477547 IL1RAPL2Q9NP60 686 aa18.88■□□□□ 0.61
SEC13-215ENST00000477547 AKAP2Q9Y2D5 859 aa18.88■□□□□ 0.61
SEC13-215ENST00000477547 A0A1B0GUL7 405 aa18.87■□□□□ 0.61
SEC13-215ENST00000477547 IFIT1P09914 478 aaKnown RBP18.87■□□□□ 0.61
SEC13-215ENST00000477547 FGFR2P21802 821 aa18.87■□□□□ 0.61
SEC13-215ENST00000477547 IARSP41252 1262 aaKnown RBP18.87■□□□□ 0.61
SEC13-215ENST00000477547 AOC3Q16853 763 aa18.87■□□□□ 0.61
SEC13-215ENST00000477547 TNNI3KQ59H18 835 aa18.87■□□□□ 0.61
SEC13-215ENST00000477547 SMC5Q8IY18 1101 aa18.87■□□□□ 0.61
SEC13-215ENST00000477547 LPIN2Q92539 896 aa18.87■□□□□ 0.61
SEC13-215ENST00000477547 BCL11AQ9H165 835 aa18.87■□□□□ 0.61
SEC13-215ENST00000477547 FPGT-TNNI3KV9GXZ4 949 aa18.87■□□□□ 0.61
SEC13-215ENST00000477547 IRS2Q9Y4H2 1338 aa18.86■□□□□ 0.61
SEC13-215ENST00000477547 KIAA2012Q0VF49 1180 aa18.86■□□□□ 0.61
SEC13-215ENST00000477547 WASHC4Q2M389 1173 aa18.86■□□□□ 0.61
SEC13-215ENST00000477547 GPR108Q9NPR9 543 aa18.86■□□□□ 0.61
SEC13-215ENST00000477547 RIMBP2O15034 1052 aa18.85■□□□□ 0.61
SEC13-215ENST00000477547 FOXN1O15353 648 aa18.85■□□□□ 0.61
SEC13-215ENST00000477547 SMARCA5O60264 1052 aaPredicted RBP18.85■□□□□ 0.61
SEC13-215ENST00000477547 CLASRPQ8N2M8 674 aaKnown RBP18.85■□□□□ 0.61
SEC13-215ENST00000477547 LARGE2Q8N3Y3 721 aa18.85■□□□□ 0.61
SEC13-215ENST00000477547 PPP4R2Q9NY27 417 aa18.85■□□□□ 0.61
SEC13-215ENST00000477547 ZBTB47Q9UFB7 747 aaPredicted RBP18.85■□□□□ 0.61
SEC13-215ENST00000477547 AKAP11Q9UKA4 1901 aa18.85■□□□□ 0.61
SEC13-215ENST00000477547 C15orf52Q6ZUT6 534 aaKnown RBP18.84■□□□□ 0.61
SEC13-215ENST00000477547 AACSQ86V21 672 aa18.84■□□□□ 0.61
SEC13-215ENST00000477547 ZC3H12CQ9C0D7 883 aaKnown RBP18.84■□□□□ 0.61
SEC13-215ENST00000477547 ADORA1P30542 326 aa18.83■□□□□ 0.61
SEC13-215ENST00000477547 B4GALNT3Q6L9W6 998 aa18.83■□□□□ 0.61
SEC13-215ENST00000477547 ZNF804AQ7Z570 1209 aa18.83■□□□□ 0.61
SEC13-215ENST00000477547 TXNRD3Q86VQ6 643 aa18.83■□□□□ 0.61
SEC13-215ENST00000477547 EAF2Q96CJ1 260 aaPredicted RBP18.83■□□□□ 0.61
SEC13-215ENST00000477547 NEUROD6Q96NK8 337 aa18.83■□□□□ 0.61
SEC13-215ENST00000477547 AK9Q5TCS8 1911 aa18.83■□□□□ 0.6
SEC13-215ENST00000477547 POTEIP0CG38 1075 aa18.82■□□□□ 0.6
SEC13-215ENST00000477547 POTEJP0CG39 1038 aa18.82■□□□□ 0.6
SEC13-215ENST00000477547 GYG1P46976 350 aa18.82■□□□□ 0.6
SEC13-215ENST00000477547 TIMM10P62072 90 aa18.82■□□□□ 0.6
SEC13-215ENST00000477547 ANKRD45Q5TZF3 282 aa18.82■□□□□ 0.6
SEC13-215ENST00000477547 CENPQQ7L2Z9 268 aaPredicted RBP18.82■□□□□ 0.6
SEC13-215ENST00000477547 NIM1KQ8IY84 436 aa18.82■□□□□ 0.6
SEC13-215ENST00000477547 VPS33BQ9H267 617 aa18.82■□□□□ 0.6
SEC13-215ENST00000477547 CREBZFQ9NS37 354 aa18.82■□□□□ 0.6
SEC13-215ENST00000477547 TLR7Q9NYK1 1049 aaKnown RBP18.82■□□□□ 0.6
SEC13-215ENST00000477547 MAST2Q6P0Q8 1798 aa18.81■□□□□ 0.6
SEC13-215ENST00000477547 G3V3G9 751 aa18.81■□□□□ 0.6
SEC13-215ENST00000477547 CAVIN4Q5BKX8 364 aa18.81■□□□□ 0.6
SEC13-215ENST00000477547 DCAF8Q5TAQ9 597 aa18.81■□□□□ 0.6
SEC13-215ENST00000477547 VPS37DQ86XT2 251 aa18.81■□□□□ 0.6
SEC13-215ENST00000477547 XAGE2Q96GT9 111 aa18.81■□□□□ 0.6
SEC13-215ENST00000477547 DBNDD2Q9BQY9 259 aa18.81■□□□□ 0.6
SEC13-215ENST00000477547 DBNDD1Q9H9R9 158 aa18.81■□□□□ 0.6
SEC13-215ENST00000477547 DBNLQ9UJU6 430 aaKnown RBP18.81■□□□□ 0.6
SEC13-215ENST00000477547 MYH7P12883 1935 aa18.81■□□□□ 0.6
SEC13-215ENST00000477547 MYO5AQ9Y4I1 1855 aaKnown RBP18.81■□□□□ 0.6
SEC13-215ENST00000477547 DOCK2Q92608 1830 aa18.8■□□□□ 0.6
SEC13-215ENST00000477547 ECE2O60344 883 aa18.8■□□□□ 0.6
SEC13-215ENST00000477547 SLC34A2O95436 690 aa18.8■□□□□ 0.6
SEC13-215ENST00000477547 IFIT2P09913 472 aaKnown RBP18.8■□□□□ 0.6
SEC13-215ENST00000477547 DOK7Q18PE1 504 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms