RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 SPOCD1Q6ZMY3 1216 aa6.61□□□□□ -1.35
XRN1-211ENST00000477237 VSIG10LQ86VR7 867 aa6.61□□□□□ -1.35
XRN1-211ENST00000477237 RASSF4Q9H2L5 321 aa6.61□□□□□ -1.35
XRN1-211ENST00000477237 FOXO3O43524 673 aa6.6□□□□□ -1.35
XRN1-211ENST00000477237 MAP4P27816 1152 aaKnown RBP6.6□□□□□ -1.35
XRN1-211ENST00000477237 ZNF124Q15973 351 aa6.6□□□□□ -1.35
XRN1-211ENST00000477237 SGO2Q562F6 1265 aa6.6□□□□□ -1.35
XRN1-211ENST00000477237 LARP1Q6PKG0 1096 aaKnown RBP6.6□□□□□ -1.35
XRN1-211ENST00000477237 OSBPL1AQ9BXW6 950 aa6.6□□□□□ -1.35
XRN1-211ENST00000477237 RNF208Q9H0X6 261 aa6.6□□□□□ -1.35
XRN1-211ENST00000477237 SEC31BQ9NQW1 1179 aa6.6□□□□□ -1.35
XRN1-211ENST00000477237 KRTAP9-7A8MTY7 169 aa6.59□□□□□ -1.35
XRN1-211ENST00000477237 HYAL2Q12891 473 aa6.59□□□□□ -1.35
XRN1-211ENST00000477237 GIMAP7Q8NHV1 300 aa6.59□□□□□ -1.35
XRN1-211ENST00000477237 VTI1AQ96AJ9 217 aa6.59□□□□□ -1.35
XRN1-211ENST00000477237 SPACA7Q96KW9 195 aa6.59□□□□□ -1.35
XRN1-211ENST00000477237 TFIP11Q9UBB9 837 aaKnown RBP6.59□□□□□ -1.35
XRN1-211ENST00000477237 MAFBQ9Y5Q3 323 aaPredicted RBP6.59□□□□□ -1.35
XRN1-211ENST00000477237 FDX2Q6P4F2 183 aa6.58□□□□□ -1.36
XRN1-211ENST00000477237 RUSC1Q9BVN2 902 aa6.58□□□□□ -1.36
XRN1-211ENST00000477237 GAS2O43903 313 aaKnown RBP6.57□□□□□ -1.36
XRN1-211ENST00000477237 PAPLNO95428 1278 aa6.57□□□□□ -1.36
XRN1-211ENST00000477237 NLRP12P59046 1061 aa6.57□□□□□ -1.36
XRN1-211ENST00000477237 COX20Q5RI15 118 aa6.57□□□□□ -1.36
XRN1-211ENST00000477237 ANKMY2Q8IV38 441 aa6.57□□□□□ -1.36
XRN1-211ENST00000477237 ETFBKMTQ8IXQ9 262 aa6.57□□□□□ -1.36
XRN1-211ENST00000477237 DBX1A6NMT0 343 aa6.56□□□□□ -1.36
XRN1-211ENST00000477237 UBAP1LF5GYI3 381 aa6.56□□□□□ -1.36
XRN1-211ENST00000477237 RXRBP28702 533 aa6.56□□□□□ -1.36
XRN1-211ENST00000477237 CPSF6Q16630 551 aaKnown RBP eCLIP6.56□□□□□ -1.36
XRN1-211ENST00000477237 KANK4Q5T7N3 995 aaPredicted RBP6.56□□□□□ -1.36
XRN1-211ENST00000477237 POP1Q99575 1024 aaKnown RBP6.56□□□□□ -1.36
XRN1-211ENST00000477237 PBX4Q9BYU1 374 aa6.56□□□□□ -1.36
XRN1-211ENST00000477237 ADAM19Q9H013 955 aa6.56□□□□□ -1.36
XRN1-211ENST00000477237 ZMYND15Q9H091 742 aa6.56□□□□□ -1.36
XRN1-211ENST00000477237 PAK6Q9NQU5 681 aaPredicted RBP6.56□□□□□ -1.36
XRN1-211ENST00000477237 BSDC1Q9NW68 430 aaPredicted RBP6.56□□□□□ -1.36
XRN1-211ENST00000477237 USP17L15C9J2P7 530 aa6.55□□□□□ -1.36
XRN1-211ENST00000477237 USP17L10C9JJH3 530 aa6.55□□□□□ -1.36
XRN1-211ENST00000477237 USP17L13C9JLJ4 530 aa6.55□□□□□ -1.36
XRN1-211ENST00000477237 USP17L12C9JPN9 530 aa6.55□□□□□ -1.36
XRN1-211ENST00000477237 USP17L11C9JVI0 530 aa6.55□□□□□ -1.36
XRN1-211ENST00000477237 USP17L21D6R901 530 aa6.55□□□□□ -1.36
XRN1-211ENST00000477237 USP17L18D6R9N7 530 aa6.55□□□□□ -1.36
XRN1-211ENST00000477237 USP17L22D6RA61 530 aa6.55□□□□□ -1.36
XRN1-211ENST00000477237 USP17L17D6RBQ6 530 aa6.55□□□□□ -1.36
XRN1-211ENST00000477237 USP17L19D6RCP7 530 aa6.55□□□□□ -1.36
XRN1-211ENST00000477237 USP17L20D6RJB6 530 aa6.55□□□□□ -1.36
XRN1-211ENST00000477237 RAD21O60216 631 aa6.55□□□□□ -1.36
XRN1-211ENST00000477237 KIF4AO95239 1232 aa6.55□□□□□ -1.36
XRN1-211ENST00000477237 PTPRAP18433 802 aa6.55□□□□□ -1.36
XRN1-211ENST00000477237 SCNN1AP37088 669 aa6.55□□□□□ -1.36
XRN1-211ENST00000477237 USP17L24Q0WX57 530 aa6.55□□□□□ -1.36
XRN1-211ENST00000477237 FLCNQ8NFG4 579 aa6.55□□□□□ -1.36
XRN1-211ENST00000477237 CCER1Q8TC90 406 aaPredicted RBP6.55□□□□□ -1.36
XRN1-211ENST00000477237 MEGF11A6BM72 1044 aa6.54□□□□□ -1.36
XRN1-211ENST00000477237 H3BRJ5 948 aa6.54□□□□□ -1.36
XRN1-211ENST00000477237 CYP26A1O43174 497 aa6.54□□□□□ -1.36
XRN1-211ENST00000477237 PIP4K2BP78356 416 aa6.54□□□□□ -1.36
XRN1-211ENST00000477237 FAM26DQ5JW98 314 aa6.54□□□□□ -1.36
XRN1-211ENST00000477237 CEP120Q8N960 986 aa6.54□□□□□ -1.36
XRN1-211ENST00000477237 ARXQ96QS3 562 aa6.54□□□□□ -1.36
XRN1-211ENST00000477237 OSGEPQ9NPF4 335 aa6.54□□□□□ -1.36
XRN1-211ENST00000477237 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.54□□□□□ -1.361e-7■■■■■ 115.4
XRN1-211ENST00000477237 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.54□□□□□ -1.36
XRN1-211ENST00000477237 CARMIL2Q6F5E8 1435 aa6.53□□□□□ -1.36
XRN1-211ENST00000477237 FAM196BA6NMK8 535 aa6.53□□□□□ -1.36
XRN1-211ENST00000477237 CYP2E1P05181 493 aaPredicted RBP6.53□□□□□ -1.36
XRN1-211ENST00000477237 ADMP35318 185 aa6.53□□□□□ -1.36
XRN1-211ENST00000477237 AGBL5Q8NDL9 886 aa6.53□□□□□ -1.36
XRN1-211ENST00000477237 WNT8BQ93098 351 aa6.53□□□□□ -1.36
XRN1-211ENST00000477237 A6NJR5 290 aa6.52□□□□□ -1.37
XRN1-211ENST00000477237 NFKBIBQ15653 356 aa6.52□□□□□ -1.37
XRN1-211ENST00000477237 TTC39BQ5VTQ0 682 aaPredicted RBP6.52□□□□□ -1.37
XRN1-211ENST00000477237 HGSNATQ68CP4 663 aa6.52□□□□□ -1.37
XRN1-211ENST00000477237 METTL22Q9BUU2 404 aaPredicted RBP6.52□□□□□ -1.37
XRN1-211ENST00000477237 FAM95CA0A1B0GW59 222 aa6.51□□□□□ -1.37
XRN1-211ENST00000477237 FAM177BA6PVY3 158 aa6.51□□□□□ -1.37
XRN1-211ENST00000477237 TIAF1O95411 115 aa6.51□□□□□ -1.37
XRN1-211ENST00000477237 FKBP5Q13451 457 aaPredicted RBP6.51□□□□□ -1.37
XRN1-211ENST00000477237 C12orf50Q8NA57 414 aaPredicted RBP6.51□□□□□ -1.37
XRN1-211ENST00000477237 FBLIM1Q8WUP2 373 aa6.51□□□□□ -1.37
XRN1-211ENST00000477237 SLC7A3Q8WY07 619 aa6.51□□□□□ -1.37
XRN1-211ENST00000477237 SAP130Q9H0E3 1048 aa6.51□□□□□ -1.37
XRN1-211ENST00000477237 CABP4P57796 275 aa6.5□□□□□ -1.37
XRN1-211ENST00000477237 NUTM2GQ5VZR2 741 aa6.5□□□□□ -1.37
XRN1-211ENST00000477237 CDPF1Q6NVV7 123 aa6.5□□□□□ -1.37
XRN1-211ENST00000477237 PAOXQ6QHF9 649 aa6.5□□□□□ -1.37
XRN1-211ENST00000477237 PIK3R5Q8WYR1 880 aa6.5□□□□□ -1.37
XRN1-211ENST00000477237 TMPRSS13Q9BYE2 586 aa6.5□□□□□ -1.37
XRN1-211ENST00000477237 FAM170BA6NMN3 283 aa6.49□□□□□ -1.37
XRN1-211ENST00000477237 BRD2P25440 801 aaKnown RBP6.49□□□□□ -1.37
XRN1-211ENST00000477237 LCE5AQ5TCM9 118 aa6.49□□□□□ -1.37
XRN1-211ENST00000477237 ZAR1Q86SH2 424 aa6.49□□□□□ -1.37
XRN1-211ENST00000477237 NCAPG2Q86XI2 1143 aa6.49□□□□□ -1.37
XRN1-211ENST00000477237 SMG8Q8ND04 991 aaKnown RBP6.49□□□□□ -1.37
XRN1-211ENST00000477237 GLMNQ92990 594 aa6.49□□□□□ -1.37
XRN1-211ENST00000477237 TBC1D32Q96NH3 1257 aa6.49□□□□□ -1.37
XRN1-211ENST00000477237 KRTAP17-1Q9BYP8 105 aa6.49□□□□□ -1.37
XRN1-211ENST00000477237 ABI2Q9NYB9 513 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms