RNA–Protein interactions for RNA: ENST00000476234.5

EXOSC1-208, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-208ENST00000476234 PCCAP05165 728 aaPredicted RBP14.3□□□□□ -0.12
EXOSC1-208ENST00000476234 CCDC152Q4G0S7 254 aa14.3□□□□□ -0.12
EXOSC1-208ENST00000476234 MIER1Q8N108 512 aa14.3□□□□□ -0.12
EXOSC1-208ENST00000476234 CCDC191Q8NCU4 936 aa14.3□□□□□ -0.12
EXOSC1-208ENST00000476234 ZNF296Q8WUU4 475 aaPredicted RBP14.3□□□□□ -0.12
EXOSC1-208ENST00000476234 CFHR5Q9BXR6 569 aa14.3□□□□□ -0.12
EXOSC1-208ENST00000476234 XDHP47989 1333 aa14.3□□□□□ -0.12
EXOSC1-208ENST00000476234 USP17L3A6NCW0 530 aa14.29□□□□□ -0.12
EXOSC1-208ENST00000476234 USP17L4A6NCW7 530 aa14.29□□□□□ -0.12
EXOSC1-208ENST00000476234 G3V3G9 751 aa14.29□□□□□ -0.12
EXOSC1-208ENST00000476234 PDE8AO60658 829 aa14.29□□□□□ -0.12
EXOSC1-208ENST00000476234 GNAI1P63096 354 aa14.29□□□□□ -0.12
EXOSC1-208ENST00000476234 DCAF8Q5TAQ9 597 aa14.29□□□□□ -0.12
EXOSC1-208ENST00000476234 MOB2Q70IA6 237 aa14.29□□□□□ -0.12
EXOSC1-208ENST00000476234 USP17L1Q7RTZ2 530 aa14.29□□□□□ -0.12
EXOSC1-208ENST00000476234 TSR2Q969E8 191 aaKnown RBP14.29□□□□□ -0.12
EXOSC1-208ENST00000476234 ZNF646O15015 1829 aaPredicted RBP14.29□□□□□ -0.12
EXOSC1-208ENST00000476234 UBE2Q2LH0YL09 131 aa14.28□□□□□ -0.12
EXOSC1-208ENST00000476234 ATP2B4P23634 1241 aa14.28□□□□□ -0.12
EXOSC1-208ENST00000476234 RIC3Q7Z5B4 369 aa14.28□□□□□ -0.12
EXOSC1-208ENST00000476234 WWC1Q8IX03 1113 aa14.28□□□□□ -0.12
EXOSC1-208ENST00000476234 MRS2Q9HD23 443 aa14.28□□□□□ -0.12
EXOSC1-208ENST00000476234 MED23Q9ULK4 1368 aa14.27□□□□□ -0.12
EXOSC1-208ENST00000476234 GPR25O00155 361 aa14.27□□□□□ -0.13
EXOSC1-208ENST00000476234 TBC1D8O95759 1140 aa14.27□□□□□ -0.13
EXOSC1-208ENST00000476234 GOLGA2Q08379 1002 aa14.27□□□□□ -0.13
EXOSC1-208ENST00000476234 NBPF9Q3BBW0 867 aa14.27□□□□□ -0.13
EXOSC1-208ENST00000476234 DACT2Q5SW24 774 aa14.27□□□□□ -0.13
EXOSC1-208ENST00000476234 WTIPA6NIX2 430 aaPredicted RBP14.26□□□□□ -0.13
EXOSC1-208ENST00000476234 MMP14P50281 582 aa14.26□□□□□ -0.13
EXOSC1-208ENST00000476234 CCDC27Q2M243 656 aa14.26□□□□□ -0.13
EXOSC1-208ENST00000476234 FBXO46Q6PJ61 603 aaPredicted RBP14.26□□□□□ -0.13
EXOSC1-208ENST00000476234 ANKRD18AQ8IVF6 992 aa14.26□□□□□ -0.13
EXOSC1-208ENST00000476234 MYD88Q99836 296 aa14.26□□□□□ -0.13
EXOSC1-208ENST00000476234 CWC25Q9NXE8 425 aaPredicted RBP14.26□□□□□ -0.13
EXOSC1-208ENST00000476234 HDAC9Q9UKV0 1011 aa14.26□□□□□ -0.13
EXOSC1-208ENST00000476234 MYO3BQ8WXR4 1341 aa14.25□□□□□ -0.13
EXOSC1-208ENST00000476234 WNT10BO00744 389 aa14.25□□□□□ -0.13
EXOSC1-208ENST00000476234 ANP32CO43423 234 aa14.25□□□□□ -0.13
EXOSC1-208ENST00000476234 PRAMEF18Q5VWM3 479 aa14.25□□□□□ -0.13
EXOSC1-208ENST00000476234 METTL22Q9BUU2 404 aaPredicted RBP14.25□□□□□ -0.13
EXOSC1-208ENST00000476234 SCAF8Q9UPN6 1271 aaKnown RBP14.25□□□□□ -0.13
EXOSC1-208ENST00000476234 LDLRAD1Q5T700 205 aa14.24□□□□□ -0.13
EXOSC1-208ENST00000476234 STRIP1Q5VSL9 837 aa14.24□□□□□ -0.13
EXOSC1-208ENST00000476234 JARID2Q92833 1246 aaPredicted RBP14.24□□□□□ -0.13
EXOSC1-208ENST00000476234 ZBED3Q96IU2 234 aaPredicted RBP14.24□□□□□ -0.13
EXOSC1-208ENST00000476234 BSDC1Q9NW68 430 aaPredicted RBP14.24□□□□□ -0.13
EXOSC1-208ENST00000476234 MINPP1Q9UNW1 487 aa14.24□□□□□ -0.13
EXOSC1-208ENST00000476234 SALL2Q9Y467 1007 aaPredicted RBP14.24□□□□□ -0.13
EXOSC1-208ENST00000476234 CTSWP56202 376 aa14.23□□□□□ -0.13
EXOSC1-208ENST00000476234 PTPN12Q05209 780 aaKnown RBP14.23□□□□□ -0.13
EXOSC1-208ENST00000476234 CALD1Q05682 793 aaKnown RBP14.23□□□□□ -0.13
EXOSC1-208ENST00000476234 SREBF2Q12772 1141 aa14.23□□□□□ -0.13
EXOSC1-208ENST00000476234 G2E3Q7L622 706 aa14.23□□□□□ -0.13
EXOSC1-208ENST00000476234 OGFOD1Q8N543 542 aa14.23□□□□□ -0.13
EXOSC1-208ENST00000476234 TTLL11Q8NHH1 800 aa14.23□□□□□ -0.13
EXOSC1-208ENST00000476234 CCDC85AQ96PX6 553 aaPredicted RBP14.23□□□□□ -0.13
EXOSC1-208ENST00000476234 CDC5LQ99459 802 aaKnown RBP14.23□□□□□ -0.13
EXOSC1-208ENST00000476234 MXD3Q9BW11 206 aa14.23□□□□□ -0.13
EXOSC1-208ENST00000476234 COA1Q9GZY4 146 aa14.23□□□□□ -0.13
EXOSC1-208ENST00000476234 R3HDMLQ9H3Y0 253 aa14.23□□□□□ -0.13
EXOSC1-208ENST00000476234 FKTNO75072 461 aa14.22□□□□□ -0.13
EXOSC1-208ENST00000476234 NF2P35240 595 aa14.22□□□□□ -0.13
EXOSC1-208ENST00000476234 CCT4P50991 539 aaKnown RBP14.22□□□□□ -0.13
EXOSC1-208ENST00000476234 IGKV5-2P06315 115 aa14.21□□□□□ -0.13
EXOSC1-208ENST00000476234 TTLL12Q14166 644 aaPredicted RBP14.21□□□□□ -0.13
EXOSC1-208ENST00000476234 SPRYD7Q5W111 196 aa14.21□□□□□ -0.13
EXOSC1-208ENST00000476234 TXNRD3Q86VQ6 643 aa14.21□□□□□ -0.13
EXOSC1-208ENST00000476234 GREM2Q9H772 168 aa14.21□□□□□ -0.13
EXOSC1-208ENST00000476234 LAMB1P07942 1786 aa14.21□□□□□ -0.13
EXOSC1-208ENST00000476234 SASH1O94885 1247 aa14.2□□□□□ -0.14
EXOSC1-208ENST00000476234 DDX58O95786 925 aaKnown RBP14.2□□□□□ -0.14
EXOSC1-208ENST00000476234 ALDH1A1P00352 501 aa14.2□□□□□ -0.14
EXOSC1-208ENST00000476234 MAP3K11Q16584 847 aa14.2□□□□□ -0.14
EXOSC1-208ENST00000476234 ARMC9Q7Z3E5 817 aa14.2□□□□□ -0.14
EXOSC1-208ENST00000476234 APOBEC3FQ8IUX4 373 aaKnown RBP14.2□□□□□ -0.14
EXOSC1-208ENST00000476234 MAP3K2Q9Y2U5 619 aa14.2□□□□□ -0.14
EXOSC1-208ENST00000476234 LEMD3Q9Y2U8 911 aa14.2□□□□□ -0.14
EXOSC1-208ENST00000476234 COL1A1P02452 1464 aaPredicted RBP14.19□□□□□ -0.14
EXOSC1-208ENST00000476234 IL16Q14005 1332 aa14.19□□□□□ -0.14
EXOSC1-208ENST00000476234 FANCIQ9NVI1 1328 aa14.19□□□□□ -0.14
EXOSC1-208ENST00000476234 INHBEP58166 350 aa14.19□□□□□ -0.14
EXOSC1-208ENST00000476234 MKRN3Q13064 507 aaKnown RBP14.19□□□□□ -0.14
EXOSC1-208ENST00000476234 TWISTNBQ3B726 338 aaPredicted RBP14.19□□□□□ -0.14
EXOSC1-208ENST00000476234 CCDC30Q5VVM6 783 aa14.19□□□□□ -0.14
EXOSC1-208ENST00000476234 KSR2Q6VAB6 950 aa14.19□□□□□ -0.14
EXOSC1-208ENST00000476234 GCC1Q96CN9 775 aa14.19□□□□□ -0.14
EXOSC1-208ENST00000476234 CHMP4AQ9BY43 222 aa14.19□□□□□ -0.14
EXOSC1-208ENST00000476234 MYH3P11055 1940 aa14.18□□□□□ -0.14
EXOSC1-208ENST00000476234 UNCXA6NJT0 531 aa14.18□□□□□ -0.14
EXOSC1-208ENST00000476234 H7C1W4 665 aa14.18□□□□□ -0.14
EXOSC1-208ENST00000476234 TTLL5Q6EMB2 1281 aa14.18□□□□□ -0.14
EXOSC1-208ENST00000476234 FAM9BQ8IZU0 186 aa14.18□□□□□ -0.14
EXOSC1-208ENST00000476234 ZNF804BA4D1E1 1349 aa14.17□□□□□ -0.14
EXOSC1-208ENST00000476234 HTTP42858 3142 aa14.17□□□□□ -0.14
EXOSC1-208ENST00000476234 PI4KAP2A4QPH2 592 aa14.17□□□□□ -0.14
EXOSC1-208ENST00000476234 MANSC4A6NHS7 340 aaPredicted RBP14.17□□□□□ -0.14
EXOSC1-208ENST00000476234 VAMP4O75379 141 aa14.17□□□□□ -0.14
EXOSC1-208ENST00000476234 ZBTB48P10074 688 aaPredicted RBP14.17□□□□□ -0.14
EXOSC1-208ENST00000476234 INTS3Q68E01 1043 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms