RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 TMEM238LA0A1B0GVL6 79 aa6.89□□□□□ -1.31
SRGAP3-205ENST00000475560 XYLBO75191 536 aa6.89□□□□□ -1.31
SRGAP3-205ENST00000475560 EGFRP00533 1210 aa6.89□□□□□ -1.31
SRGAP3-205ENST00000475560 GRNP28799 593 aaKnown RBP6.89□□□□□ -1.31
SRGAP3-205ENST00000475560 GPC1P35052 558 aa6.89□□□□□ -1.31
SRGAP3-205ENST00000475560 LIG3P49916 1009 aa6.89□□□□□ -1.31
SRGAP3-205ENST00000475560 LMNB2Q03252 620 aa6.89□□□□□ -1.31
SRGAP3-205ENST00000475560 SQSTM1Q13501 440 aa6.89□□□□□ -1.31
SRGAP3-205ENST00000475560 RASGRF1Q13972 1273 aa6.89□□□□□ -1.31
SRGAP3-205ENST00000475560 GRIN2CQ14957 1233 aa6.89□□□□□ -1.31
SRGAP3-205ENST00000475560 DDR2Q16832 855 aa6.89□□□□□ -1.31
SRGAP3-205ENST00000475560 TAF7LQ5H9L4 462 aa6.89□□□□□ -1.31
SRGAP3-205ENST00000475560 SLC27A3Q5K4L6 730 aa6.89□□□□□ -1.31
SRGAP3-205ENST00000475560 SNAP47Q5SQN1 464 aa6.89□□□□□ -1.31
SRGAP3-205ENST00000475560 GORABQ5T7V8 394 aa6.89□□□□□ -1.31
SRGAP3-205ENST00000475560 TTC39BQ5VTQ0 682 aaPredicted RBP6.89□□□□□ -1.31
SRGAP3-205ENST00000475560 BICDL1Q6ZP65 573 aa6.89□□□□□ -1.31
SRGAP3-205ENST00000475560 NLRP13Q86W25 1043 aa6.89□□□□□ -1.31
SRGAP3-205ENST00000475560 OXCT2Q9BYC2 517 aaPredicted RBP6.89□□□□□ -1.31
SRGAP3-205ENST00000475560 ROBO2Q9HCK4 1378 aa6.88□□□□□ -1.31
SRGAP3-205ENST00000475560 CRKP46108 304 aa6.88□□□□□ -1.31
SRGAP3-205ENST00000475560 GIPRP48546 466 aa6.88□□□□□ -1.31
SRGAP3-205ENST00000475560 EIF6P56537 245 aaKnown RBP6.88□□□□□ -1.31
SRGAP3-205ENST00000475560 NNTQ13423 1086 aa6.88□□□□□ -1.31
SRGAP3-205ENST00000475560 PEAR1Q5VY43 1037 aaPredicted RBP6.88□□□□□ -1.31
SRGAP3-205ENST00000475560 DTHD1Q6ZMT9 781 aa6.88□□□□□ -1.31
SRGAP3-205ENST00000475560 CCDC81Q6ZN84 652 aa6.88□□□□□ -1.31
SRGAP3-205ENST00000475560 FMNL3Q8IVF7 1028 aa6.88□□□□□ -1.31
SRGAP3-205ENST00000475560 FAM9AQ8IZU1 332 aaPredicted RBP6.88□□□□□ -1.31
SRGAP3-205ENST00000475560 FAM169BQ8N8A8 192 aa6.88□□□□□ -1.31
SRGAP3-205ENST00000475560 MRGPRX2Q96LB1 330 aa6.88□□□□□ -1.31
SRGAP3-205ENST00000475560 FEZ1Q99689 392 aa6.88□□□□□ -1.31
SRGAP3-205ENST00000475560 LATS2Q9NRM7 1088 aa6.88□□□□□ -1.31
SRGAP3-205ENST00000475560 PPT2Q9UMR5 302 aa6.88□□□□□ -1.31
SRGAP3-205ENST00000475560 WNT7AO00755 349 aa6.87□□□□□ -1.31
SRGAP3-205ENST00000475560 PEX14O75381 377 aa6.87□□□□□ -1.31
SRGAP3-205ENST00000475560 FBXO24O75426 580 aa6.87□□□□□ -1.31
SRGAP3-205ENST00000475560 EDN3P14138 238 aa6.87□□□□□ -1.31
SRGAP3-205ENST00000475560 HCLS1P14317 486 aaPredicted RBP6.87□□□□□ -1.31
SRGAP3-205ENST00000475560 EPB42P16452 691 aa6.87□□□□□ -1.31
SRGAP3-205ENST00000475560 FAM196AQ6ZSG2 479 aa6.87□□□□□ -1.31
SRGAP3-205ENST00000475560 FERMT3Q86UX7 667 aa6.87□□□□□ -1.31
SRGAP3-205ENST00000475560 EXOC8Q8IYI6 725 aa6.87□□□□□ -1.31
SRGAP3-205ENST00000475560 ZNF526Q8TF50 670 aaPredicted RBP6.87□□□□□ -1.31
SRGAP3-205ENST00000475560 JDP2Q8WYK2 163 aa6.87□□□□□ -1.31
SRGAP3-205ENST00000475560 ZIC5Q96T25 663 aa6.87□□□□□ -1.31
SRGAP3-205ENST00000475560 IER2Q9BTL4 223 aa6.87□□□□□ -1.31
SRGAP3-205ENST00000475560 KLF16Q9BXK1 252 aaPredicted RBP6.87□□□□□ -1.31
SRGAP3-205ENST00000475560 ZFYVE1Q9HBF4 777 aa6.87□□□□□ -1.31
SRGAP3-205ENST00000475560 C11orf16Q9NQ32 467 aa6.87□□□□□ -1.31
SRGAP3-205ENST00000475560 ACTR10Q9NZ32 417 aa6.87□□□□□ -1.31
SRGAP3-205ENST00000475560 SALL4Q9UJQ4 1053 aa6.87□□□□□ -1.31
SRGAP3-205ENST00000475560 LEMD3Q9Y2U8 911 aa6.87□□□□□ -1.31
SRGAP3-205ENST00000475560 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.87□□□□□ -1.31
SRGAP3-205ENST00000475560 VIL1P09327 827 aaKnown RBP6.86□□□□□ -1.31
SRGAP3-205ENST00000475560 PHKA2P46019 1235 aa6.86□□□□□ -1.31
SRGAP3-205ENST00000475560 RNF144AP50876 292 aaPredicted RBP6.86□□□□□ -1.31
SRGAP3-205ENST00000475560 TKFCQ3LXA3 575 aa6.86□□□□□ -1.31
SRGAP3-205ENST00000475560 SEZ6Q53EL9 994 aa6.86□□□□□ -1.31
SRGAP3-205ENST00000475560 TPTE2Q6XPS3 522 aa6.86□□□□□ -1.31
SRGAP3-205ENST00000475560 LRRC69Q6ZNQ3 347 aa6.86□□□□□ -1.31
SRGAP3-205ENST00000475560 LIAT1Q6ZQX7 453 aa6.86□□□□□ -1.31
SRGAP3-205ENST00000475560 PGBD3Q8N328 593 aa6.86□□□□□ -1.31
SRGAP3-205ENST00000475560 THAP3Q8WTV1 239 aaPredicted RBP6.86□□□□□ -1.31
SRGAP3-205ENST00000475560 ITPKCQ96DU7 683 aa6.86□□□□□ -1.31
SRGAP3-205ENST00000475560 CRBNQ96SW2 442 aa6.86□□□□□ -1.31
SRGAP3-205ENST00000475560 CEP44Q9C0F1 390 aa6.86□□□□□ -1.31
SRGAP3-205ENST00000475560 ABCB6Q9NP58 842 aa6.86□□□□□ -1.31
SRGAP3-205ENST00000475560 GABBR1Q9UBS5 961 aa6.86□□□□□ -1.31
SRGAP3-205ENST00000475560 CYP2E1P05181 493 aaPredicted RBP6.85□□□□□ -1.31
SRGAP3-205ENST00000475560 CELA3AP09093 270 aa6.85□□□□□ -1.31
SRGAP3-205ENST00000475560 TFE3P19532 575 aaPredicted RBP6.85□□□□□ -1.31
SRGAP3-205ENST00000475560 C2orf27AQ580R0 203 aa6.85□□□□□ -1.31
SRGAP3-205ENST00000475560 Q6ZNB5 142 aa6.85□□□□□ -1.31
SRGAP3-205ENST00000475560 AGMOQ6ZNB7 445 aa6.85□□□□□ -1.31
SRGAP3-205ENST00000475560 KRT26Q7Z3Y9 468 aa6.85□□□□□ -1.31
SRGAP3-205ENST00000475560 JMYQ8N9B5 988 aa6.85□□□□□ -1.31
SRGAP3-205ENST00000475560 MORC4Q8TE76 937 aa6.85□□□□□ -1.31
SRGAP3-205ENST00000475560 TCF12Q99081 682 aa6.85□□□□□ -1.31
SRGAP3-205ENST00000475560 LIN7BQ9HAP6 207 aa6.85□□□□□ -1.31
SRGAP3-205ENST00000475560 GEMIN8Q9NWZ8 242 aaKnown RBP6.85□□□□□ -1.31
SRGAP3-205ENST00000475560 SPATA31C2B4DYI2 1134 aa6.84□□□□□ -1.31
SRGAP3-205ENST00000475560 ZIC2O95409 532 aaPredicted RBP6.84□□□□□ -1.31
SRGAP3-205ENST00000475560 ALDH1A1P00352 501 aa6.84□□□□□ -1.31
SRGAP3-205ENST00000475560 SEPT6Q14141 434 aa6.84□□□□□ -1.31
SRGAP3-205ENST00000475560 TCEA2Q15560 299 aa6.84□□□□□ -1.31
SRGAP3-205ENST00000475560 FXNQ16595 210 aa6.84□□□□□ -1.31
SRGAP3-205ENST00000475560 TTBK2Q6IQ55 1244 aa6.84□□□□□ -1.31
SRGAP3-205ENST00000475560 CCAR1Q8IX12 1150 aaKnown RBP6.84□□□□□ -1.31
SRGAP3-205ENST00000475560 OR6P1Q8NGX9 317 aa6.84□□□□□ -1.31
SRGAP3-205ENST00000475560 LRRC3Q9BY71 257 aa6.84□□□□□ -1.31
SRGAP3-205ENST00000475560 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.84□□□□□ -1.31
SRGAP3-205ENST00000475560 HOMER2Q9NSB8 354 aa6.84□□□□□ -1.31
SRGAP3-205ENST00000475560 MAPK8IP1Q9UQF2 711 aa6.84□□□□□ -1.31
SRGAP3-205ENST00000475560 WASF2Q9Y6W5 498 aa6.84□□□□□ -1.31
SRGAP3-205ENST00000475560 KDM2BQ8NHM5 1336 aa6.83□□□□□ -1.32
SRGAP3-205ENST00000475560 TLR3O15455 904 aaKnown RBP6.83□□□□□ -1.32
SRGAP3-205ENST00000475560 TRIM37O94972 964 aa6.83□□□□□ -1.32
SRGAP3-205ENST00000475560 ATP4AP20648 1035 aa6.83□□□□□ -1.32
SRGAP3-205ENST00000475560 MCM4P33991 863 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms