RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 ISCA1Q9BUE6 129 aa18.18■□□□□ 0.5
ABCF3-209ENST00000472608 SCARF1Q14162 830 aa18.17■□□□□ 0.5
ABCF3-209ENST00000472608 G2E3Q7L622 706 aa18.17■□□□□ 0.5
ABCF3-209ENST00000472608 AGBL3Q8NEM8 1001 aa18.17■□□□□ 0.5
ABCF3-209ENST00000472608 PODXL2Q9NZ53 605 aa18.17■□□□□ 0.5
ABCF3-209ENST00000472608 HTTP42858 3142 aa18.17■□□□□ 0.5
ABCF3-209ENST00000472608 DDX60Q8IY21 1712 aaKnown RBP18.17■□□□□ 0.5
ABCF3-209ENST00000472608 SCN9AQ15858 1988 aa18.17■□□□□ 0.5
ABCF3-209ENST00000472608 PI4KAP2A4QPH2 592 aa18.16■□□□□ 0.5
ABCF3-209ENST00000472608 PI4KAP1Q8N8J0 262 aa18.16■□□□□ 0.5
ABCF3-209ENST00000472608 GMLQ99445 158 aa18.16■□□□□ 0.5
ABCF3-209ENST00000472608 METTL22Q9BUU2 404 aaPredicted RBP18.16■□□□□ 0.5
ABCF3-209ENST00000472608 RSBN1LQ6PCB5 846 aaPredicted RBP18.15■□□□□ 0.5
ABCF3-209ENST00000472608 ZC3H12CQ9C0D7 883 aaKnown RBP18.15■□□□□ 0.5
ABCF3-209ENST00000472608 FKBP5Q13451 457 aaPredicted RBP18.14■□□□□ 0.49
ABCF3-209ENST00000472608 MOB2Q70IA6 237 aa18.14■□□□□ 0.49
ABCF3-209ENST00000472608 CCDC191Q8NCU4 936 aa18.14■□□□□ 0.49
ABCF3-209ENST00000472608 MAP3K2Q9Y2U5 619 aa18.14■□□□□ 0.49
ABCF3-209ENST00000472608 COL4A1P02462 1669 aa18.14■□□□□ 0.49
ABCF3-209ENST00000472608 UBE2Q2LH0YL09 131 aa18.13■□□□□ 0.49
ABCF3-209ENST00000472608 FKTNO75072 461 aa18.13■□□□□ 0.49
ABCF3-209ENST00000472608 RPS8P62241 208 aaKnown RBP18.13■□□□□ 0.49
ABCF3-209ENST00000472608 MRPL50Q8N5N7 158 aaKnown RBP18.13■□□□□ 0.49
ABCF3-209ENST00000472608 SSH1Q8WYL5 1049 aa18.13■□□□□ 0.49
ABCF3-209ENST00000472608 NEXNQ0ZGT2 675 aa18.12■□□□□ 0.49
ABCF3-209ENST00000472608 FAM89AQ96GI7 184 aa18.12■□□□□ 0.49
ABCF3-209ENST00000472608 MYOZ2Q9NPC6 264 aa18.12■□□□□ 0.49
ABCF3-209ENST00000472608 ATP5J2-PTCD1G3V325 749 aa18.11■□□□□ 0.49
ABCF3-209ENST00000472608 USP17L8P0C7I0 530 aa18.11■□□□□ 0.49
ABCF3-209ENST00000472608 SREBF2Q12772 1141 aa18.11■□□□□ 0.49
ABCF3-209ENST00000472608 INTS3Q68E01 1043 aaKnown RBP18.11■□□□□ 0.49
ABCF3-209ENST00000472608 DNAAF4Q8WXU2 420 aa18.11■□□□□ 0.49
ABCF3-209ENST00000472608 MYD88Q99836 296 aa18.11■□□□□ 0.49
ABCF3-209ENST00000472608 R3HDMLQ9H3Y0 253 aa18.11■□□□□ 0.49
ABCF3-209ENST00000472608 PTPRCP08575 1304 aa18.11■□□□□ 0.49
ABCF3-209ENST00000472608 BRCA2P51587 3418 aa18.1■□□□□ 0.49
ABCF3-209ENST00000472608 FXR1P51114 621 aaKnown RBP eCLIP18.1■□□□□ 0.49
ABCF3-209ENST00000472608 CENPFP49454 3210 aa18.1■□□□□ 0.49
ABCF3-209ENST00000472608 IGKV5-2P06315 115 aa18.09■□□□□ 0.49
ABCF3-209ENST00000472608 RARSP54136 660 aaKnown RBP18.09■□□□□ 0.49
ABCF3-209ENST00000472608 ZBTB38Q8NAP3 1195 aaPredicted RBP18.09■□□□□ 0.49
ABCF3-209ENST00000472608 LINS1Q8NG48 757 aa18.09■□□□□ 0.49
ABCF3-209ENST00000472608 CWC25Q9NXE8 425 aaPredicted RBP18.09■□□□□ 0.49
ABCF3-209ENST00000472608 PSME4Q14997 1843 aa18.08■□□□□ 0.48
ABCF3-209ENST00000472608 POTEFA5A3E0 1075 aa18.08■□□□□ 0.48
ABCF3-209ENST00000472608 HSP90B1P14625 803 aaKnown RBP18.08■□□□□ 0.48
ABCF3-209ENST00000472608 SMC4Q9NTJ3 1288 aa18.08■□□□□ 0.48
ABCF3-209ENST00000472608 GGA1Q9UJY5 639 aa18.08■□□□□ 0.48
ABCF3-209ENST00000472608 KIAA0100Q14667 2235 aaKnown RBP18.07■□□□□ 0.48
ABCF3-209ENST00000472608 NEURL1BA8MQ27 555 aa18.07■□□□□ 0.48
ABCF3-209ENST00000472608 UFL1O94874 794 aa18.07■□□□□ 0.48
ABCF3-209ENST00000472608 PCCAP05165 728 aaPredicted RBP18.07■□□□□ 0.48
ABCF3-209ENST00000472608 PRAMEF18Q5VWM3 479 aa18.07■□□□□ 0.48
ABCF3-209ENST00000472608 PODNQ7Z5L7 613 aa18.07■□□□□ 0.48
ABCF3-209ENST00000472608 USP17L3A6NCW0 530 aa18.06■□□□□ 0.48
ABCF3-209ENST00000472608 USP17L4A6NCW7 530 aa18.06■□□□□ 0.48
ABCF3-209ENST00000472608 G3V3G9 751 aa18.06■□□□□ 0.48
ABCF3-209ENST00000472608 IRS4O14654 1257 aaPredicted RBP18.06■□□□□ 0.48
ABCF3-209ENST00000472608 ALDH1A1P00352 501 aa18.06■□□□□ 0.48
ABCF3-209ENST00000472608 LDLRAD1Q5T700 205 aa18.06■□□□□ 0.48
ABCF3-209ENST00000472608 DCAF8Q5TAQ9 597 aa18.06■□□□□ 0.48
ABCF3-209ENST00000472608 USP17L1Q7RTZ2 530 aa18.06■□□□□ 0.48
ABCF3-209ENST00000472608 SCAF8Q9UPN6 1271 aaKnown RBP18.06■□□□□ 0.48
ABCF3-209ENST00000472608 PTPN12Q05209 780 aaKnown RBP18.05■□□□□ 0.48
ABCF3-209ENST00000472608 NBPF9Q3BBW0 867 aa18.05■□□□□ 0.48
ABCF3-209ENST00000472608 BEND3Q5T5X7 828 aa18.05■□□□□ 0.48
ABCF3-209ENST00000472608 SPRYD7Q5W111 196 aa18.05■□□□□ 0.48
ABCF3-209ENST00000472608 OTOP1Q7RTM1 612 aa18.05■□□□□ 0.48
ABCF3-209ENST00000472608 ARHGAP45Q92619 1136 aa18.05■□□□□ 0.48
ABCF3-209ENST00000472608 SEC31BQ9NQW1 1179 aa18.05■□□□□ 0.48
ABCF3-209ENST00000472608 ANKIB1Q9P2G1 1089 aa18.05■□□□□ 0.48
ABCF3-209ENST00000472608 KIF16BQ96L93 1317 aa18.04■□□□□ 0.48
ABCF3-209ENST00000472608 F6X3S4 739 aa18.04■□□□□ 0.48
ABCF3-209ENST00000472608 NF2P35240 595 aa18.04■□□□□ 0.48
ABCF3-209ENST00000472608 INHBEP58166 350 aa18.04■□□□□ 0.48
ABCF3-209ENST00000472608 GCKRQ14397 625 aa18.04■□□□□ 0.48
ABCF3-209ENST00000472608 RBBP6Q7Z6E9 1792 aaKnown RBP18.04■□□□□ 0.48
ABCF3-209ENST00000472608 H7C1W4 665 aa18.03■□□□□ 0.48
ABCF3-209ENST00000472608 WNT10BO00744 389 aa18.03■□□□□ 0.48
ABCF3-209ENST00000472608 ALDH1L1O75891 902 aa18.03■□□□□ 0.48
ABCF3-209ENST00000472608 MMP14P50281 582 aa18.03■□□□□ 0.48
ABCF3-209ENST00000472608 MKRN3Q13064 507 aaKnown RBP18.03■□□□□ 0.48
ABCF3-209ENST00000472608 TTLL12Q14166 644 aaPredicted RBP18.03■□□□□ 0.48
ABCF3-209ENST00000472608 CWF19L2Q2TBE0 894 aaKnown RBP18.03■□□□□ 0.48
ABCF3-209ENST00000472608 ARMC5Q96C12 935 aa18.03■□□□□ 0.48
ABCF3-209ENST00000472608 TRIM17Q9Y577 477 aa18.03■□□□□ 0.48
ABCF3-209ENST00000472608 SZT2Q5T011 3432 aa18.03■□□□□ 0.48
ABCF3-209ENST00000472608 ARMC9Q7Z3E5 817 aa18.02■□□□□ 0.48
ABCF3-209ENST00000472608 API5Q9BZZ5 524 aaKnown RBP18.02■□□□□ 0.48
ABCF3-209ENST00000472608 XDHP47989 1333 aa18.01■□□□□ 0.47
ABCF3-209ENST00000472608 MANSC4A6NHS7 340 aaPredicted RBP18.01■□□□□ 0.47
ABCF3-209ENST00000472608 IPO8O15397 1037 aaKnown RBP18.01■□□□□ 0.47
ABCF3-209ENST00000472608 ATP2B4P23634 1241 aa18.01■□□□□ 0.47
ABCF3-209ENST00000472608 RTL5Q5HYW3 569 aaPredicted RBP18.01■□□□□ 0.47
ABCF3-209ENST00000472608 DACT2Q5SW24 774 aa18.01■□□□□ 0.47
ABCF3-209ENST00000472608 IFNL1Q8IU54 200 aa18.01■□□□□ 0.47
ABCF3-209ENST00000472608 SRCIN1Q9C0H9 1055 aa18.01■□□□□ 0.47
ABCF3-209ENST00000472608 NOB1Q9ULX3 412 aaKnown RBP18.01■□□□□ 0.47
ABCF3-209ENST00000472608 PTPN22Q9Y2R2 807 aa18.01■□□□□ 0.47
ABCF3-209ENST00000472608 PDE8AO60658 829 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms