RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 ERICH6BQ5W0A0 696 aa17.33■□□□□ 0.36
SSR4-207ENST00000471724 C15orf52Q6ZUT6 534 aaKnown RBP17.33■□□□□ 0.36
SSR4-207ENST00000471724 LPIN2Q92539 896 aa17.33■□□□□ 0.36
SSR4-207ENST00000471724 ZC3H12CQ9C0D7 883 aaKnown RBP17.33■□□□□ 0.36
SSR4-207ENST00000471724 DCTPP1Q9H773 170 aa17.33■□□□□ 0.36
SSR4-207ENST00000471724 GPR108Q9NPR9 543 aa17.33■□□□□ 0.36
SSR4-207ENST00000471724 SASH1O94885 1247 aa17.32■□□□□ 0.36
SSR4-207ENST00000471724 AOC3Q16853 763 aa17.32■□□□□ 0.36
SSR4-207ENST00000471724 LARGE2Q8N3Y3 721 aa17.32■□□□□ 0.36
SSR4-207ENST00000471724 GCC1Q96CN9 775 aa17.32■□□□□ 0.36
SSR4-207ENST00000471724 COL4A5P29400 1685 aa17.32■□□□□ 0.36
SSR4-207ENST00000471724 ZNF646O15015 1829 aaPredicted RBP17.31■□□□□ 0.36
SSR4-207ENST00000471724 FGFR2P21802 821 aa17.31■□□□□ 0.36
SSR4-207ENST00000471724 ZNF804AQ7Z570 1209 aa17.31■□□□□ 0.36
SSR4-207ENST00000471724 NIM1KQ8IY84 436 aa17.31■□□□□ 0.36
SSR4-207ENST00000471724 RHPN1Q8TCX5 695 aa17.31■□□□□ 0.36
SSR4-207ENST00000471724 JDP2Q8WYK2 163 aa17.31■□□□□ 0.36
SSR4-207ENST00000471724 LRRCC1Q9C099 1032 aa17.31■□□□□ 0.36
SSR4-207ENST00000471724 IRS2Q9Y4H2 1338 aa17.3■□□□□ 0.36
SSR4-207ENST00000471724 SCN9AQ15858 1988 aa17.3■□□□□ 0.36
SSR4-207ENST00000471724 G3V3G9 751 aa17.3■□□□□ 0.36
SSR4-207ENST00000471724 DCAF8Q5TAQ9 597 aa17.3■□□□□ 0.36
SSR4-207ENST00000471724 A0A1B0GUL7 405 aa17.29■□□□□ 0.36
SSR4-207ENST00000471724 TNNI3KQ59H18 835 aa17.29■□□□□ 0.36
SSR4-207ENST00000471724 CAVIN4Q5BKX8 364 aa17.29■□□□□ 0.36
SSR4-207ENST00000471724 DPY19L2Q6NUT2 758 aa17.29■□□□□ 0.36
SSR4-207ENST00000471724 CLASRPQ8N2M8 674 aaKnown RBP17.29■□□□□ 0.36
SSR4-207ENST00000471724 GPR101Q96P66 508 aaPredicted RBP17.29■□□□□ 0.36
SSR4-207ENST00000471724 COA1Q9GZY4 146 aa17.29■□□□□ 0.36
SSR4-207ENST00000471724 ZBTB47Q9UFB7 747 aaPredicted RBP17.29■□□□□ 0.36
SSR4-207ENST00000471724 FPGT-TNNI3KV9GXZ4 949 aa17.29■□□□□ 0.36
SSR4-207ENST00000471724 SNAP23O00161 211 aa17.28■□□□□ 0.36
SSR4-207ENST00000471724 APBB1O00213 710 aa17.28■□□□□ 0.36
SSR4-207ENST00000471724 RIMBP2O15034 1052 aa17.28■□□□□ 0.36
SSR4-207ENST00000471724 PRELPP51888 382 aa17.28■□□□□ 0.36
SSR4-207ENST00000471724 C1QTNF8P60827 252 aa17.28■□□□□ 0.36
SSR4-207ENST00000471724 ECE2O60344 883 aa17.27■□□□□ 0.36
SSR4-207ENST00000471724 KLRK1P26718 216 aa17.27■□□□□ 0.36
SSR4-207ENST00000471724 VPS37DQ86XT2 251 aa17.27■□□□□ 0.36
SSR4-207ENST00000471724 SMC5Q8IY18 1101 aa17.27■□□□□ 0.36
SSR4-207ENST00000471724 GLTPD2A6NH11 291 aa17.26■□□□□ 0.35
SSR4-207ENST00000471724 WTIPA6NIX2 430 aaPredicted RBP17.26■□□□□ 0.35
SSR4-207ENST00000471724 PODNQ7Z5L7 613 aa17.26■□□□□ 0.35
SSR4-207ENST00000471724 TXNRD3Q86VQ6 643 aa17.26■□□□□ 0.35
SSR4-207ENST00000471724 DBNDD1Q9H9R9 158 aa17.26■□□□□ 0.35
SSR4-207ENST00000471724 IL1RAPL2Q9NP60 686 aa17.26■□□□□ 0.35
SSR4-207ENST00000471724 ZNRF3Q9ULT6 936 aa17.26■□□□□ 0.35
SSR4-207ENST00000471724 HIBADHP31937 336 aaKnown RBP17.25■□□□□ 0.35
SSR4-207ENST00000471724 GORABQ5T7V8 394 aa17.25■□□□□ 0.35
SSR4-207ENST00000471724 AACSQ86V21 672 aa17.25■□□□□ 0.35
SSR4-207ENST00000471724 XAGE2Q96GT9 111 aa17.25■□□□□ 0.35
SSR4-207ENST00000471724 NEUROD6Q96NK8 337 aa17.25■□□□□ 0.35
SSR4-207ENST00000471724 GNL3LQ9NVN8 582 aaKnown RBP17.25■□□□□ 0.35
SSR4-207ENST00000471724 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.25■□□□□ 0.35
SSR4-207ENST00000471724 AKAP11Q9UKA4 1901 aa17.24■□□□□ 0.35
SSR4-207ENST00000471724 FZD9O00144 591 aa17.24■□□□□ 0.35
SSR4-207ENST00000471724 KIF3CO14782 793 aa17.24■□□□□ 0.35
SSR4-207ENST00000471724 IGHDP01880 384 aa17.24■□□□□ 0.35
SSR4-207ENST00000471724 IFIT2P09913 472 aaKnown RBP17.24■□□□□ 0.35
SSR4-207ENST00000471724 GYG1P46976 350 aa17.24■□□□□ 0.35
SSR4-207ENST00000471724 EIF6P56537 245 aaKnown RBP17.24■□□□□ 0.35
SSR4-207ENST00000471724 TIMM10P62072 90 aa17.24■□□□□ 0.35
SSR4-207ENST00000471724 DOK7Q18PE1 504 aa17.24■□□□□ 0.35
SSR4-207ENST00000471724 C16orf71Q8IYS4 520 aaPredicted RBP17.24■□□□□ 0.35
SSR4-207ENST00000471724 CCDC136Q96JN2 1154 aa17.24■□□□□ 0.35
SSR4-207ENST00000471724 FAM84BQ96KN1 310 aaPredicted RBP17.24■□□□□ 0.35
SSR4-207ENST00000471724 CD209Q9NNX6 404 aa17.24■□□□□ 0.35
SSR4-207ENST00000471724 SEMA3EO15041 775 aa17.23■□□□□ 0.35
SSR4-207ENST00000471724 ZBTB22O15209 634 aa17.23■□□□□ 0.35
SSR4-207ENST00000471724 IL1R1P14778 569 aa17.23■□□□□ 0.35
SSR4-207ENST00000471724 ADORA1P30542 326 aa17.23■□□□□ 0.35
SSR4-207ENST00000471724 FBXO33Q7Z6M2 555 aa17.23■□□□□ 0.35
SSR4-207ENST00000471724 EAF2Q96CJ1 260 aaPredicted RBP17.23■□□□□ 0.35
SSR4-207ENST00000471724 NMRK2Q9NPI5 230 aa17.23■□□□□ 0.35
SSR4-207ENST00000471724 DBNLQ9UJU6 430 aaKnown RBP17.23■□□□□ 0.35
SSR4-207ENST00000471724 MAST2Q6P0Q8 1798 aa17.23■□□□□ 0.35
SSR4-207ENST00000471724 TOMM70O94826 608 aa17.22■□□□□ 0.35
SSR4-207ENST00000471724 CCDC158Q5M9N0 1113 aa17.22■□□□□ 0.35
SSR4-207ENST00000471724 CCDC102BQ68D86 513 aa17.22■□□□□ 0.35
SSR4-207ENST00000471724 CENPQQ7L2Z9 268 aaPredicted RBP17.22■□□□□ 0.35
SSR4-207ENST00000471724 GPATCH3Q96I76 525 aa17.22■□□□□ 0.35
SSR4-207ENST00000471724 DBNDD2Q9BQY9 259 aa17.22■□□□□ 0.35
SSR4-207ENST00000471724 PPP4R2Q9NY27 417 aa17.22■□□□□ 0.35
SSR4-207ENST00000471724 WDR90Q96KV7 1748 aa17.21■□□□□ 0.35
SSR4-207ENST00000471724 SCN4AP35499 1836 aa17.21■□□□□ 0.35
SSR4-207ENST00000471724 YDJCA8MPS7 323 aa17.21■□□□□ 0.35
SSR4-207ENST00000471724 FRAT2O75474 233 aaPredicted RBP17.21■□□□□ 0.35
SSR4-207ENST00000471724 UQCRFS1P1P0C7P4 283 aa17.21■□□□□ 0.35
SSR4-207ENST00000471724 VEGFAP15692 232 aaPredicted RBP17.21■□□□□ 0.35
SSR4-207ENST00000471724 PHKA1P46020 1223 aa17.21■□□□□ 0.35
SSR4-207ENST00000471724 BCAMP50895 628 aa17.21■□□□□ 0.35
SSR4-207ENST00000471724 TNIP1Q15025 636 aa17.21■□□□□ 0.35
SSR4-207ENST00000471724 ANKRD45Q5TZF3 282 aa17.21■□□□□ 0.35
SSR4-207ENST00000471724 TDRD7Q8NHU6 1098 aaKnown RBP17.21■□□□□ 0.35
SSR4-207ENST00000471724 RRAGCQ9HB90 399 aa17.21■□□□□ 0.35
SSR4-207ENST00000471724 DOCK2Q92608 1830 aa17.21■□□□□ 0.35
SSR4-207ENST00000471724 PDS5AQ29RF7 1337 aaKnown RBP17.21■□□□□ 0.34
SSR4-207ENST00000471724 ZNF541Q9H0D2 1346 aa17.21■□□□□ 0.34
SSR4-207ENST00000471724 USP17L3A6NCW0 530 aa17.2■□□□□ 0.34
SSR4-207ENST00000471724 USP17L4A6NCW7 530 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms