RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 UBE4AQ14139 1066 aa22.04■■□□□ 1.12
VPS72-204ENST00000471423 C15orf52Q6ZUT6 534 aaKnown RBP22.04■■□□□ 1.12
VPS72-204ENST00000471423 ZBTB40Q9NUA8 1239 aa22.04■■□□□ 1.12
VPS72-204ENST00000471423 PSMD14O00487 310 aa22.03■■□□□ 1.12
VPS72-204ENST00000471423 VEGFAP15692 232 aaPredicted RBP22.03■■□□□ 1.12
VPS72-204ENST00000471423 IL15P40933 162 aaPredicted RBP22.03■■□□□ 1.12
VPS72-204ENST00000471423 POLA2Q14181 598 aa22.03■■□□□ 1.12
VPS72-204ENST00000471423 TNIP1Q15025 636 aa22.03■■□□□ 1.12
VPS72-204ENST00000471423 CEP85Q6P2H3 762 aa22.03■■□□□ 1.12
VPS72-204ENST00000471423 COA1Q9GZY4 146 aa22.03■■□□□ 1.12
VPS72-204ENST00000471423 SCN4AP35499 1836 aa22.02■■□□□ 1.12
VPS72-204ENST00000471423 PODNQ7Z5L7 613 aa22.02■■□□□ 1.12
VPS72-204ENST00000471423 SSH3Q8TE77 659 aa22.02■■□□□ 1.12
VPS72-204ENST00000471423 CHMP4BQ9H444 224 aaKnown RBP22.02■■□□□ 1.12
VPS72-204ENST00000471423 PSME4Q14997 1843 aa22.01■■□□□ 1.11
VPS72-204ENST00000471423 IQCA1LA6NCM1 817 aa22.01■■□□□ 1.11
VPS72-204ENST00000471423 GMPSP49915 693 aaPredicted RBP22.01■■□□□ 1.11
VPS72-204ENST00000471423 SCNN1DP51172 638 aa22.01■■□□□ 1.11
VPS72-204ENST00000471423 PUM3Q15397 648 aaKnown RBP22.01■■□□□ 1.11
VPS72-204ENST00000471423 ZNF804AQ7Z570 1209 aa22.01■■□□□ 1.11
VPS72-204ENST00000471423 CEP126Q9P2H0 1117 aa22.01■■□□□ 1.11
VPS72-204ENST00000471423 HACL1Q9UJ83 578 aa22■■□□□ 1.11
VPS72-204ENST00000471423 ZBTB12Q9Y330 459 aaPredicted RBP22■■□□□ 1.11
VPS72-204ENST00000471423 FGFR2P21802 821 aa21.99■■□□□ 1.11
VPS72-204ENST00000471423 LMOD1P29536 600 aaPredicted RBP21.99■■□□□ 1.11
VPS72-204ENST00000471423 GYG1P46976 350 aa21.99■■□□□ 1.11
VPS72-204ENST00000471423 C16orf71Q8IYS4 520 aaPredicted RBP21.99■■□□□ 1.11
VPS72-204ENST00000471423 CD209Q9NNX6 404 aa21.99■■□□□ 1.11
VPS72-204ENST00000471423 ZNF646O15015 1829 aaPredicted RBP21.99■■□□□ 1.11
VPS72-204ENST00000471423 FBXW7Q969H0 707 aa21.98■■□□□ 1.11
VPS72-204ENST00000471423 TAF1DQ9H5J8 278 aaPredicted RBP21.98■■□□□ 1.11
VPS72-204ENST00000471423 USP17L3A6NCW0 530 aa21.97■■□□□ 1.11
VPS72-204ENST00000471423 USP17L4A6NCW7 530 aa21.97■■□□□ 1.11
VPS72-204ENST00000471423 VIL1P09327 827 aaKnown RBP21.97■■□□□ 1.11
VPS72-204ENST00000471423 IFIT1P09914 478 aaKnown RBP21.97■■□□□ 1.11
VPS72-204ENST00000471423 SLC5A1P13866 664 aa21.97■■□□□ 1.11
VPS72-204ENST00000471423 EPS15P42566 896 aa21.97■■□□□ 1.11
VPS72-204ENST00000471423 TFCP2Q12800 502 aa21.97■■□□□ 1.11
VPS72-204ENST00000471423 G3BP1Q13283 466 aaKnown RBP eCLIP21.97■■□□□ 1.11
VPS72-204ENST00000471423 ATP2B3Q16720 1220 aa21.97■■□□□ 1.11
VPS72-204ENST00000471423 USP17L1Q7RTZ2 530 aa21.97■■□□□ 1.11
VPS72-204ENST00000471423 LPIN2Q92539 896 aa21.97■■□□□ 1.11
VPS72-204ENST00000471423 FAM84BQ96KN1 310 aaPredicted RBP21.97■■□□□ 1.11
VPS72-204ENST00000471423 GPRC5DQ9NZD1 345 aa21.97■■□□□ 1.11
VPS72-204ENST00000471423 IL1R1P14778 569 aa21.96■■□□□ 1.11
VPS72-204ENST00000471423 EPHX2P34913 555 aa21.96■■□□□ 1.11
VPS72-204ENST00000471423 SURF6O75683 361 aaKnown RBP21.95■■□□□ 1.1
VPS72-204ENST00000471423 TOMM70O94826 608 aa21.95■■□□□ 1.1
VPS72-204ENST00000471423 RPS12P25398 132 aaKnown RBP21.95■■□□□ 1.1
VPS72-204ENST00000471423 HIBADHP31937 336 aaKnown RBP21.95■■□□□ 1.1
VPS72-204ENST00000471423 CAVIN4Q5BKX8 364 aa21.95■■□□□ 1.1
VPS72-204ENST00000471423 RSBN1LQ6PCB5 846 aaPredicted RBP21.95■■□□□ 1.1
VPS72-204ENST00000471423 SIRT2Q8IXJ6 389 aa21.95■■□□□ 1.1
VPS72-204ENST00000471423 RPAP2Q8IXW5 612 aaPredicted RBP21.95■■□□□ 1.1
VPS72-204ENST00000471423 CRBNQ96SW2 442 aa21.95■■□□□ 1.1
VPS72-204ENST00000471423 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.95■■□□□ 1.1
VPS72-204ENST00000471423 ZNF609O15014 1411 aa21.95■■□□□ 1.1
VPS72-204ENST00000471423 ARAP2Q8WZ64 1704 aa21.94■■□□□ 1.1
VPS72-204ENST00000471423 SHTN1A0MZ66 631 aa21.94■■□□□ 1.1
VPS72-204ENST00000471423 POTEIP0CG38 1075 aa21.94■■□□□ 1.1
VPS72-204ENST00000471423 POTEJP0CG39 1038 aa21.94■■□□□ 1.1
VPS72-204ENST00000471423 GTF2IP78347 998 aa21.94■■□□□ 1.1
VPS72-204ENST00000471423 OS9Q13438 667 aaPredicted RBP21.94■■□□□ 1.1
VPS72-204ENST00000471423 EAPPQ56P03 285 aaPredicted RBP21.94■■□□□ 1.1
VPS72-204ENST00000471423 DACT2Q5SW24 774 aa21.94■■□□□ 1.1
VPS72-204ENST00000471423 STRIP1Q5VSL9 837 aa21.94■■□□□ 1.1
VPS72-204ENST00000471423 FBXO33Q7Z6M2 555 aa21.94■■□□□ 1.1
VPS72-204ENST00000471423 VPS37DQ86XT2 251 aa21.94■■□□□ 1.1
VPS72-204ENST00000471423 MICALL2Q8IY33 904 aa21.94■■□□□ 1.1
VPS72-204ENST00000471423 DPF2Q92785 391 aa21.94■■□□□ 1.1
VPS72-204ENST00000471423 MXD3Q9BW11 206 aa21.94■■□□□ 1.1
VPS72-204ENST00000471423 SASH1O94885 1247 aa21.93■■□□□ 1.1
VPS72-204ENST00000471423 BCAMP50895 628 aa21.93■■□□□ 1.1
VPS72-204ENST00000471423 TTLL5Q6EMB2 1281 aa21.93■■□□□ 1.1
VPS72-204ENST00000471423 CNOT7Q9UIV1 285 aaKnown RBP21.93■■□□□ 1.1
VPS72-204ENST00000471423 NOP58Q9Y2X3 529 aaKnown RBP21.93■■□□□ 1.1
VPS72-204ENST00000471423 SUPT16HQ9Y5B9 1047 aaKnown RBP21.93■■□□□ 1.1
VPS72-204ENST00000471423 HMMRO75330 724 aa21.92■■□□□ 1.1
VPS72-204ENST00000471423 AGBL3Q8NEM8 1001 aa21.92■■□□□ 1.1
VPS72-204ENST00000471423 TDRD7Q8NHU6 1098 aaKnown RBP21.92■■□□□ 1.1
VPS72-204ENST00000471423 RBM46Q8TBY0 533 aaKnown RBP21.92■■□□□ 1.1
VPS72-204ENST00000471423 ADARB2Q9NS39 739 aaKnown RBP21.92■■□□□ 1.1
VPS72-204ENST00000471423 IQSEC3Q9UPP2 1182 aaPredicted RBP21.92■■□□□ 1.1
VPS72-204ENST00000471423 JAG2Q9Y219 1238 aa21.92■■□□□ 1.1
VPS72-204ENST00000471423 EXOC6BQ9Y2D4 811 aa21.92■■□□□ 1.1
VPS72-204ENST00000471423 AKAP2Q9Y2D5 859 aa21.92■■□□□ 1.1
VPS72-204ENST00000471423 ADAMTSL1Q8N6G6 1762 aa21.92■■□□□ 1.1
VPS72-204ENST00000471423 A0A1B0GUL7 405 aa21.91■■□□□ 1.1
VPS72-204ENST00000471423 ADORA1P30542 326 aa21.91■■□□□ 1.1
VPS72-204ENST00000471423 PNMA8AQ86V59 439 aaPredicted RBP21.91■■□□□ 1.1
VPS72-204ENST00000471423 GMLQ99445 158 aa21.91■■□□□ 1.1
VPS72-204ENST00000471423 MYO3BQ8WXR4 1341 aa21.9■■□□□ 1.1
VPS72-204ENST00000471423 H7C1D1 291 aa21.9■■□□□ 1.1
VPS72-204ENST00000471423 TIMM10P62072 90 aa21.9■■□□□ 1.1
VPS72-204ENST00000471423 FRAT2O75474 233 aaPredicted RBP21.89■■□□□ 1.09
VPS72-204ENST00000471423 C1QTNF8P60827 252 aa21.89■■□□□ 1.09
VPS72-204ENST00000471423 USP50Q70EL3 339 aaPredicted RBP21.89■■□□□ 1.09
VPS72-204ENST00000471423 TRPM4Q8TD43 1214 aa21.89■■□□□ 1.09
VPS72-204ENST00000471423 FAM205AQ6ZU69 1335 aa21.88■■□□□ 1.09
VPS72-204ENST00000471423 LDHDQ86WU2 507 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms