RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 UTP14AQ9BVJ6 771 aaKnown RBP11.22□□□□□ -0.61
PTPRE-207ENST00000471218 UPF2Q9HAU5 1272 aaKnown RBP11.22□□□□□ -0.61
PTPRE-207ENST00000471218 GPR108Q9NPR9 543 aa11.22□□□□□ -0.61
PTPRE-207ENST00000471218 ZNRF3Q9ULT6 936 aa11.22□□□□□ -0.61
PTPRE-207ENST00000471218 ATP6V0A2Q9Y487 856 aa11.22□□□□□ -0.61
PTPRE-207ENST00000471218 RBM19Q9Y4C8 960 aaKnown RBP11.22□□□□□ -0.61
PTPRE-207ENST00000471218 ATP5J2-PTCD1G3V325 749 aa11.21□□□□□ -0.61
PTPRE-207ENST00000471218 CSF1RP07333 972 aa11.21□□□□□ -0.61
PTPRE-207ENST00000471218 SCNN1DP51172 638 aa11.21□□□□□ -0.61
PTPRE-207ENST00000471218 FOXO4P98177 505 aa11.21□□□□□ -0.61
PTPRE-207ENST00000471218 G3BP1Q13283 466 aaKnown RBP eCLIP11.21□□□□□ -0.61
PTPRE-207ENST00000471218 TTC22Q5TAA0 569 aa11.21□□□□□ -0.61
PTPRE-207ENST00000471218 GPRC5DQ9NZD1 345 aa11.21□□□□□ -0.61
PTPRE-207ENST00000471218 EXOC6BQ9Y2D4 811 aa11.21□□□□□ -0.61
PTPRE-207ENST00000471218 TLL2Q9Y6L7 1015 aa11.21□□□□□ -0.61
PTPRE-207ENST00000471218 SH3TC1Q8TE82 1336 aa11.2□□□□□ -0.62
PTPRE-207ENST00000471218 ERC2O15083 957 aa11.2□□□□□ -0.62
PTPRE-207ENST00000471218 EPB41L2O43491 1005 aaKnown RBP11.2□□□□□ -0.62
PTPRE-207ENST00000471218 MX1P20591 662 aa11.2□□□□□ -0.62
PTPRE-207ENST00000471218 GPTP24298 496 aa11.2□□□□□ -0.62
PTPRE-207ENST00000471218 EPS15P42566 896 aa11.2□□□□□ -0.62
PTPRE-207ENST00000471218 RFX5P48382 616 aaPredicted RBP11.2□□□□□ -0.62
PTPRE-207ENST00000471218 PDE1AP54750 535 aa11.2□□□□□ -0.62
PTPRE-207ENST00000471218 SUSD4Q5VX71 490 aa11.2□□□□□ -0.62
PTPRE-207ENST00000471218 OLFM4Q6UX06 510 aa11.2□□□□□ -0.62
PTPRE-207ENST00000471218 DPP8Q6V1X1 898 aaPredicted RBP11.2□□□□□ -0.62
PTPRE-207ENST00000471218 CDC37L1Q7L3B6 337 aa11.2□□□□□ -0.62
PTPRE-207ENST00000471218 SP8Q8IXZ3 490 aa11.2□□□□□ -0.62
PTPRE-207ENST00000471218 IL27Q8NEV9 243 aa11.2□□□□□ -0.62
PTPRE-207ENST00000471218 RTFDC1Q9BY42 306 aaPredicted RBP11.2□□□□□ -0.62
PTPRE-207ENST00000471218 CACNA1SQ13698 1873 aa11.2□□□□□ -0.62
PTPRE-207ENST00000471218 H7C1D1 291 aa11.19□□□□□ -0.62
PTPRE-207ENST00000471218 PDE8AO60658 829 aa11.19□□□□□ -0.62
PTPRE-207ENST00000471218 IL15P40933 162 aaPredicted RBP11.19□□□□□ -0.62
PTPRE-207ENST00000471218 MLLT1Q03111 559 aaPredicted RBP11.19□□□□□ -0.62
PTPRE-207ENST00000471218 PTPN12Q05209 780 aaKnown RBP11.19□□□□□ -0.62
PTPRE-207ENST00000471218 OS9Q13438 667 aaPredicted RBP11.19□□□□□ -0.62
PTPRE-207ENST00000471218 CIAPIN1Q6FI81 312 aa11.19□□□□□ -0.62
PTPRE-207ENST00000471218 CASC1Q6TDU7 716 aa11.19□□□□□ -0.62
PTPRE-207ENST00000471218 DDX46Q7L014 1031 aaKnown RBP11.19□□□□□ -0.62
PTPRE-207ENST00000471218 MPNDQ8N594 471 aa11.19□□□□□ -0.62
PTPRE-207ENST00000471218 PGAP2Q9UHJ9 254 aa11.19□□□□□ -0.62
PTPRE-207ENST00000471218 ADAMTSL1Q8N6G6 1762 aa11.18□□□□□ -0.62
PTPRE-207ENST00000471218 CDC45O75419 566 aa11.18□□□□□ -0.62
PTPRE-207ENST00000471218 GLRX3O76003 335 aaKnown RBP11.18□□□□□ -0.62
PTPRE-207ENST00000471218 NTSR2O95665 410 aa11.18□□□□□ -0.62
PTPRE-207ENST00000471218 RGS19P49795 217 aa11.18□□□□□ -0.62
PTPRE-207ENST00000471218 NOGQ13253 232 aa11.18□□□□□ -0.62
PTPRE-207ENST00000471218 LMBR1LQ6UX01 489 aa11.18□□□□□ -0.62
PTPRE-207ENST00000471218 SAPCD2Q86UD0 394 aa11.18□□□□□ -0.62
PTPRE-207ENST00000471218 TRMT112Q9UI30 125 aaKnown RBP11.18□□□□□ -0.62
PTPRE-207ENST00000471218 SNED1Q8TER0 1413 aa11.18□□□□□ -0.62
PTPRE-207ENST00000471218 ABCC12Q96J65 1359 aa11.17□□□□□ -0.62
PTPRE-207ENST00000471218 UBN2Q6ZU65 1347 aa11.17□□□□□ -0.62
PTPRE-207ENST00000471218 CELF2O95319 508 aaKnown RBP11.17□□□□□ -0.62
PTPRE-207ENST00000471218 ANP32AP39687 249 aaKnown RBP11.17□□□□□ -0.62
PTPRE-207ENST00000471218 CTSWP56202 376 aa11.17□□□□□ -0.62
PTPRE-207ENST00000471218 CXCL9Q07325 125 aa11.17□□□□□ -0.62
PTPRE-207ENST00000471218 KIAA2012Q0VF49 1180 aa11.17□□□□□ -0.62
PTPRE-207ENST00000471218 AOC3Q16853 763 aa11.17□□□□□ -0.62
PTPRE-207ENST00000471218 CCDC57Q2TAC2 916 aa11.17□□□□□ -0.62
PTPRE-207ENST00000471218 EPHA10Q5JZY3 1008 aa11.17□□□□□ -0.62
PTPRE-207ENST00000471218 CST9Q5W186 159 aa11.17□□□□□ -0.62
PTPRE-207ENST00000471218 CYP4F22Q6NT55 531 aa11.17□□□□□ -0.62
PTPRE-207ENST00000471218 DPF2Q92785 391 aa11.17□□□□□ -0.62
PTPRE-207ENST00000471218 CCDC85CA6NKD9 419 aa11.16□□□□□ -0.62
PTPRE-207ENST00000471218 EYA2O00167 538 aa11.16□□□□□ -0.62
PTPRE-207ENST00000471218 IRS4O14654 1257 aaPredicted RBP11.16□□□□□ -0.62
PTPRE-207ENST00000471218 IFIT2P09913 472 aaKnown RBP11.16□□□□□ -0.62
PTPRE-207ENST00000471218 GRM1Q13255 1194 aa11.16□□□□□ -0.62
PTPRE-207ENST00000471218 IFIT5Q13325 482 aaKnown RBP11.16□□□□□ -0.62
PTPRE-207ENST00000471218 SKAP1Q86WV1 359 aa11.16□□□□□ -0.62
PTPRE-207ENST00000471218 REM2Q8IYK8 340 aaPredicted RBP11.16□□□□□ -0.62
PTPRE-207ENST00000471218 NUP98P52948 1817 aa11.16□□□□□ -0.62
PTPRE-207ENST00000471218 RFX7Q2KHR2 1363 aa11.16□□□□□ -0.62
PTPRE-207ENST00000471218 GSPT1P15170 499 aaKnown RBP11.15□□□□□ -0.62
PTPRE-207ENST00000471218 RPS12P25398 132 aaKnown RBP11.15□□□□□ -0.62
PTPRE-207ENST00000471218 GMPSP49915 693 aaPredicted RBP11.15□□□□□ -0.62
PTPRE-207ENST00000471218 GRAPQ13588 217 aa11.15□□□□□ -0.62
PTPRE-207ENST00000471218 CCDC152Q4G0S7 254 aa11.15□□□□□ -0.62
PTPRE-207ENST00000471218 GRAPLQ8TC17 118 aaPredicted RBP11.15□□□□□ -0.62
PTPRE-207ENST00000471218 CCDC102AQ96A19 550 aa11.15□□□□□ -0.62
PTPRE-207ENST00000471218 DDRGK1Q96HY6 314 aa11.15□□□□□ -0.62
PTPRE-207ENST00000471218 ECHDC1Q9NTX5 307 aa11.15□□□□□ -0.62
PTPRE-207ENST00000471218 PCDH10Q9P2E7 1040 aa11.15□□□□□ -0.62
PTPRE-207ENST00000471218 CNOT7Q9UIV1 285 aaKnown RBP11.15□□□□□ -0.62
PTPRE-207ENST00000471218 AKAP2Q9Y2D5 859 aa11.15□□□□□ -0.62
PTPRE-207ENST00000471218 LAMB2P55268 1798 aa11.15□□□□□ -0.62
PTPRE-207ENST00000471218 ANKRD18BA2A2Z9 1011 aa11.14□□□□□ -0.63
PTPRE-207ENST00000471218 TRAF5O00463 557 aa11.14□□□□□ -0.63
PTPRE-207ENST00000471218 SMARCA5O60264 1052 aaPredicted RBP11.14□□□□□ -0.63
PTPRE-207ENST00000471218 SASH1O94885 1247 aa11.14□□□□□ -0.63
PTPRE-207ENST00000471218 C2orf69Q8N8R5 385 aa11.14□□□□□ -0.63
PTPRE-207ENST00000471218 TTLL11Q8NHH1 800 aa11.14□□□□□ -0.63
PTPRE-207ENST00000471218 FAM89AQ96GI7 184 aa11.14□□□□□ -0.63
PTPRE-207ENST00000471218 EYA3Q99504 573 aa11.14□□□□□ -0.63
PTPRE-207ENST00000471218 TRPM7Q96QT4 1865 aa11.14□□□□□ -0.63
PTPRE-207ENST00000471218 HIP1O00291 1037 aa11.13□□□□□ -0.63
PTPRE-207ENST00000471218 ZBTB22O15209 634 aa11.13□□□□□ -0.63
PTPRE-207ENST00000471218 REC8O95072 547 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms