RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 USP5P45974 858 aa9.76□□□□□ -0.85
PRPF40A-206ENST00000471167 USPL1Q5W0Q7 1092 aa9.76□□□□□ -0.85
PRPF40A-206ENST00000471167 TXNDC11Q6PKC3 985 aa9.76□□□□□ -0.85
PRPF40A-206ENST00000471167 ADAM19Q9H013 955 aa9.76□□□□□ -0.85
PRPF40A-206ENST00000471167 RBSNQ9H1K0 784 aa9.76□□□□□ -0.85
PRPF40A-206ENST00000471167 POLR3DP05423 398 aaPredicted RBP9.75□□□□□ -0.85
PRPF40A-206ENST00000471167 RSPO4Q2I0M5 234 aaPredicted RBP9.75□□□□□ -0.85
PRPF40A-206ENST00000471167 NKAPLQ5M9Q1 402 aa9.75□□□□□ -0.85
PRPF40A-206ENST00000471167 SPACA7Q96KW9 195 aa9.75□□□□□ -0.85
PRPF40A-206ENST00000471167 FAM129BQ96TA1 746 aa9.75□□□□□ -0.85
PRPF40A-206ENST00000471167 ZKSCAN3Q9BRR0 538 aa9.75□□□□□ -0.85
PRPF40A-206ENST00000471167 KCNK4Q9NYG8 393 aa9.75□□□□□ -0.85
PRPF40A-206ENST00000471167 PHACTR2O75167 634 aa9.74□□□□□ -0.85
PRPF40A-206ENST00000471167 SMNDC1O75940 238 aaKnown RBP eCLIP9.74□□□□□ -0.851e-6■□□□□ 9.7
PRPF40A-206ENST00000471167 BRD1O95696 1058 aa9.74□□□□□ -0.85
PRPF40A-206ENST00000471167 HGSNATQ68CP4 663 aa9.74□□□□□ -0.85
PRPF40A-206ENST00000471167 SNX29Q8TEQ0 813 aa9.74□□□□□ -0.85
PRPF40A-206ENST00000471167 NACC1Q96RE7 527 aa9.74□□□□□ -0.85
PRPF40A-206ENST00000471167 PPME1Q9Y570 386 aa9.74□□□□□ -0.85
PRPF40A-206ENST00000471167 NOS3P29474 1203 aa9.73□□□□□ -0.85
PRPF40A-206ENST00000471167 CDC27P30260 824 aa9.73□□□□□ -0.85
PRPF40A-206ENST00000471167 EHHADHQ08426 723 aa9.73□□□□□ -0.85
PRPF40A-206ENST00000471167 IGF2-ASQ6U949 168 aa9.73□□□□□ -0.85
PRPF40A-206ENST00000471167 NXPE3Q969Y0 559 aa9.73□□□□□ -0.85
PRPF40A-206ENST00000471167 GPR182O15218 404 aa9.72□□□□□ -0.85
PRPF40A-206ENST00000471167 ALX3O95076 343 aa9.72□□□□□ -0.85
PRPF40A-206ENST00000471167 CDC25BP30305 580 aa9.72□□□□□ -0.85
PRPF40A-206ENST00000471167 FOXD4L6Q3SYB3 417 aaPredicted RBP9.72□□□□□ -0.85
PRPF40A-206ENST00000471167 FOXD4L3Q6VB84 417 aaPredicted RBP9.72□□□□□ -0.85
PRPF40A-206ENST00000471167 TXNRD3Q86VQ6 643 aa9.72□□□□□ -0.85
PRPF40A-206ENST00000471167 WFDC12Q8WWY7 111 aa9.72□□□□□ -0.85
PRPF40A-206ENST00000471167 PMEPA1Q969W9 287 aa9.72□□□□□ -0.85
PRPF40A-206ENST00000471167 OSMRQ99650 979 aa9.72□□□□□ -0.85
PRPF40A-206ENST00000471167 PDE2AO00408 941 aaPredicted RBP9.71□□□□□ -0.86
PRPF40A-206ENST00000471167 WISP1O95388 367 aa9.71□□□□□ -0.86
PRPF40A-206ENST00000471167 NRG1Q02297 640 aaPredicted RBP9.71□□□□□ -0.86
PRPF40A-206ENST00000471167 PDE4CQ08493 712 aa9.71□□□□□ -0.86
PRPF40A-206ENST00000471167 ORC1Q13415 861 aa9.71□□□□□ -0.86
PRPF40A-206ENST00000471167 CACTIN-AS1Q8N1I8 211 aa9.71□□□□□ -0.86
PRPF40A-206ENST00000471167 TMEM102Q8N9M5 508 aaPredicted RBP9.71□□□□□ -0.86
PRPF40A-206ENST00000471167 CCER1Q8TC90 406 aaPredicted RBP9.71□□□□□ -0.86
PRPF40A-206ENST00000471167 CARD10Q9BWT7 1032 aa9.71□□□□□ -0.86
PRPF40A-206ENST00000471167 BRPF3Q9ULD4 1205 aa9.71□□□□□ -0.86
PRPF40A-206ENST00000471167 SOX13Q9UN79 622 aa9.71□□□□□ -0.86
PRPF40A-206ENST00000471167 LOC100996750A0A140TA64 210 aa9.7□□□□□ -0.86
PRPF40A-206ENST00000471167 ADAM11O75078 769 aa9.7□□□□□ -0.86
PRPF40A-206ENST00000471167 IREB2P48200 963 aaKnown RBP9.7□□□□□ -0.86
PRPF40A-206ENST00000471167 TTC16Q8NEE8 873 aa9.7□□□□□ -0.86
PRPF40A-206ENST00000471167 KRTAP4-6Q9BYQ5 205 aa9.7□□□□□ -0.86
PRPF40A-206ENST00000471167 K7ELQ4 463 aaPredicted RBP9.69□□□□□ -0.86
PRPF40A-206ENST00000471167 FSCN2O14926 492 aa9.69□□□□□ -0.86
PRPF40A-206ENST00000471167 DDX3YO15523 660 aaKnown RBP9.69□□□□□ -0.86
PRPF40A-206ENST00000471167 VN1R5Q7Z5H4 357 aa9.69□□□□□ -0.86
PRPF40A-206ENST00000471167 KLHDC7BQ96G42 594 aa9.69□□□□□ -0.86
PRPF40A-206ENST00000471167 MEGF10Q96KG7 1140 aa9.69□□□□□ -0.86
PRPF40A-206ENST00000471167 USP21Q9UK80 565 aa9.69□□□□□ -0.86
PRPF40A-206ENST00000471167 AMOTL2Q9Y2J4 779 aa9.69□□□□□ -0.86
PRPF40A-206ENST00000471167 METTL12A8MUP2 240 aa9.68□□□□□ -0.86
PRPF40A-206ENST00000471167 PTPRAP18433 802 aa9.68□□□□□ -0.86
PRPF40A-206ENST00000471167 GALNT12Q8IXK2 581 aa9.68□□□□□ -0.86
PRPF40A-206ENST00000471167 TMEM130Q8N3G9 435 aa9.68□□□□□ -0.86
PRPF40A-206ENST00000471167 FOXD4L4Q8WXT5 416 aaPredicted RBP9.68□□□□□ -0.86
PRPF40A-206ENST00000471167 A0A1W2PP55 124 aa9.67□□□□□ -0.86
PRPF40A-206ENST00000471167 F8W735 103 aaPredicted RBP9.67□□□□□ -0.86
PRPF40A-206ENST00000471167 TCF12Q99081 682 aa9.67□□□□□ -0.86
PRPF40A-206ENST00000471167 BHLHE41Q9C0J9 482 aaPredicted RBP9.67□□□□□ -0.86
PRPF40A-206ENST00000471167 MUC3BQ9H195 1237 aa9.67□□□□□ -0.86
PRPF40A-206ENST00000471167 SRA1Q9HD15 236 aaKnown RBP9.67□□□□□ -0.86
PRPF40A-206ENST00000471167 NDUFB5O43674 189 aa9.66□□□□□ -0.86
PRPF40A-206ENST00000471167 EDN3P14138 238 aa9.66□□□□□ -0.86
PRPF40A-206ENST00000471167 Q6ZS46 218 aa9.66□□□□□ -0.86
PRPF40A-206ENST00000471167 MAP4K3Q8IVH8 894 aa9.66□□□□□ -0.86
PRPF40A-206ENST00000471167 AGGF1Q8N302 714 aaeCLIP9.66□□□□□ -0.86
PRPF40A-206ENST00000471167 CITED4Q96RK1 184 aa9.66□□□□□ -0.86
PRPF40A-206ENST00000471167 TRAIPQ9BWF2 469 aa9.66□□□□□ -0.86
PRPF40A-206ENST00000471167 RBCK1Q9BYM8 510 aa9.66□□□□□ -0.86
PRPF40A-206ENST00000471167 NIF3L1Q9GZT8 377 aa9.66□□□□□ -0.86
PRPF40A-206ENST00000471167 SOX1O00570 391 aaPredicted RBP9.65□□□□□ -0.86
PRPF40A-206ENST00000471167 DYRK3O43781 588 aa9.65□□□□□ -0.86
PRPF40A-206ENST00000471167 CD68P34810 354 aaPredicted RBP9.65□□□□□ -0.86
PRPF40A-206ENST00000471167 KIAA1211Q6ZU35 1233 aa9.65□□□□□ -0.86
PRPF40A-206ENST00000471167 DZIP1LQ8IYY4 767 aaKnown RBP9.65□□□□□ -0.86
PRPF40A-206ENST00000471167 MRPL18Q9H0U6 180 aaKnown RBP9.65□□□□□ -0.86
PRPF40A-206ENST00000471167 SEMA6BQ9H3T3 888 aa9.65□□□□□ -0.86
PRPF40A-206ENST00000471167 H3BRJ5 948 aa9.64□□□□□ -0.87
PRPF40A-206ENST00000471167 GRIA4P48058 902 aa9.64□□□□□ -0.87
PRPF40A-206ENST00000471167 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.64□□□□□ -0.87
PRPF40A-206ENST00000471167 TMC7Q7Z402 723 aa9.64□□□□□ -0.87
PRPF40A-206ENST00000471167 IVNS1ABPQ9Y6Y0 642 aa9.64□□□□□ -0.87
PRPF40A-206ENST00000471167 SPRED3Q2MJR0 410 aa9.63□□□□□ -0.87
PRPF40A-206ENST00000471167 CCNJLQ8IV13 435 aa9.63□□□□□ -0.87
PRPF40A-206ENST00000471167 UBASH3BQ8TF42 649 aa9.63□□□□□ -0.87
PRPF40A-206ENST00000471167 BSNDQ8WZ55 320 aa9.63□□□□□ -0.87
PRPF40A-206ENST00000471167 UBL7Q96S82 380 aaPredicted RBP9.63□□□□□ -0.87
PRPF40A-206ENST00000471167 AKTIPQ9H8T0 292 aa9.63□□□□□ -0.87
PRPF40A-206ENST00000471167 EIF1AYO14602 144 aaKnown RBP9.62□□□□□ -0.87
PRPF40A-206ENST00000471167 DSC3Q14574 896 aa9.62□□□□□ -0.87
PRPF40A-206ENST00000471167 TP53INP1Q96A56 240 aa9.62□□□□□ -0.87
PRPF40A-206ENST00000471167 ALKBH8Q96BT7 664 aaKnown RBP9.62□□□□□ -0.87
PRPF40A-206ENST00000471167 SEC31BQ9NQW1 1179 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms