RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 IVNS1ABPQ9Y6Y0 642 aa7.55□□□□□ -1.2
COL9A1-206ENST00000470652 RAC1P63000 192 aa7.54□□□□□ -1.2
COL9A1-206ENST00000470652 NRG1Q02297 640 aaPredicted RBP7.54□□□□□ -1.2
COL9A1-206ENST00000470652 GRIK5Q16478 980 aa7.54□□□□□ -1.2
COL9A1-206ENST00000470652 COL13A1Q5TAT6 717 aaPredicted RBP7.54□□□□□ -1.2
COL9A1-206ENST00000470652 MSL1Q68DK7 614 aa7.54□□□□□ -1.2
COL9A1-206ENST00000470652 TP53INP1Q96A56 240 aa7.54□□□□□ -1.2
COL9A1-206ENST00000470652 LENG1Q96BZ8 264 aaPredicted RBP7.54□□□□□ -1.2
COL9A1-206ENST00000470652 BIN2Q9UBW5 565 aaPredicted RBP7.54□□□□□ -1.2
COL9A1-206ENST00000470652 HYAL3O43820 417 aaPredicted RBP7.53□□□□□ -1.2
COL9A1-206ENST00000470652 PHACTR2O75167 634 aa7.53□□□□□ -1.2
COL9A1-206ENST00000470652 NEFLP07196 543 aa7.53□□□□□ -1.2
COL9A1-206ENST00000470652 LRP8Q14114 963 aa7.53□□□□□ -1.2
COL9A1-206ENST00000470652 CACTIN-AS1Q8N1I8 211 aa7.53□□□□□ -1.2
COL9A1-206ENST00000470652 CEP120Q8N960 986 aa7.53□□□□□ -1.2
COL9A1-206ENST00000470652 CHRDQ9H2X0 955 aa7.53□□□□□ -1.2
COL9A1-206ENST00000470652 SALL4Q9UJQ4 1053 aa7.53□□□□□ -1.2
COL9A1-206ENST00000470652 USP21Q9UK80 565 aa7.53□□□□□ -1.2
COL9A1-206ENST00000470652 SMNDC1O75940 238 aaKnown RBP eCLIP7.52□□□□□ -1.21
COL9A1-206ENST00000470652 ILDR2Q71H61 639 aa7.52□□□□□ -1.21
COL9A1-206ENST00000470652 WFDC8Q8IUA0 241 aa7.52□□□□□ -1.21
COL9A1-206ENST00000470652 DMRTC2Q8IXT2 367 aaPredicted RBP7.52□□□□□ -1.21
COL9A1-206ENST00000470652 TMC1Q8TDI8 760 aa7.52□□□□□ -1.21
COL9A1-206ENST00000470652 FAM129BQ96TA1 746 aa7.52□□□□□ -1.21
COL9A1-206ENST00000470652 KANSL3Q9P2N6 904 aa7.52□□□□□ -1.21
COL9A1-206ENST00000470652 LCE3BQ5TA77 95 aa7.51□□□□□ -1.21
COL9A1-206ENST00000470652 DTWD1Q8N5C7 304 aa7.51□□□□□ -1.21
COL9A1-206ENST00000470652 RBCK1Q9BYM8 510 aa7.51□□□□□ -1.21
COL9A1-206ENST00000470652 PBX4Q9BYU1 374 aa7.51□□□□□ -1.21
COL9A1-206ENST00000470652 FOXD3Q9UJU5 478 aaPredicted RBP7.51□□□□□ -1.21
COL9A1-206ENST00000470652 EREGO14944 169 aa7.5□□□□□ -1.21
COL9A1-206ENST00000470652 EDN3P14138 238 aa7.5□□□□□ -1.21
COL9A1-206ENST00000470652 ATP11AP98196 1134 aa7.5□□□□□ -1.21
COL9A1-206ENST00000470652 CEP135Q66GS9 1140 aa7.5□□□□□ -1.21
COL9A1-206ENST00000470652 GDF6Q6KF10 455 aaPredicted RBP7.5□□□□□ -1.21
COL9A1-206ENST00000470652 IL22RA1Q8N6P7 574 aa7.5□□□□□ -1.21
COL9A1-206ENST00000470652 DMRTB1Q96MA1 342 aa7.5□□□□□ -1.21
COL9A1-206ENST00000470652 KRTAP4-12Q9BQ66 201 aa7.5□□□□□ -1.21
COL9A1-206ENST00000470652 RASSF4Q9H2L5 321 aa7.5□□□□□ -1.21
COL9A1-206ENST00000470652 ZFYVE28Q9HCC9 887 aa7.5□□□□□ -1.21
COL9A1-206ENST00000470652 DCTN4Q9UJW0 460 aa7.5□□□□□ -1.21
COL9A1-206ENST00000470652 AMOTL2Q9Y2J4 779 aa7.5□□□□□ -1.21
COL9A1-206ENST00000470652 AEBP1Q8IUX7 1158 aa7.49□□□□□ -1.21
COL9A1-206ENST00000470652 MUC3BQ9H195 1237 aa7.49□□□□□ -1.21
COL9A1-206ENST00000470652 TRIM33Q9UPN9 1127 aa7.49□□□□□ -1.21
COL9A1-206ENST00000470652 FMR1NBQ8N0W7 255 aaPredicted RBP7.48□□□□□ -1.21
COL9A1-206ENST00000470652 DZANK1Q9NVP4 752 aa7.48□□□□□ -1.21
COL9A1-206ENST00000470652 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.48□□□□□ -1.21
COL9A1-206ENST00000470652 FAM177BA6PVY3 158 aa7.47□□□□□ -1.21
COL9A1-206ENST00000470652 IGHA2P01877 340 aa7.47□□□□□ -1.21
COL9A1-206ENST00000470652 ALKBH8Q96BT7 664 aaKnown RBP7.47□□□□□ -1.21
COL9A1-206ENST00000470652 POP1Q99575 1024 aaKnown RBP7.47□□□□□ -1.21
COL9A1-206ENST00000470652 SSBP4Q9BWG4 385 aaPredicted RBP7.47□□□□□ -1.21
COL9A1-206ENST00000470652 PPME1Q9Y570 386 aa7.47□□□□□ -1.21
COL9A1-206ENST00000470652 NFKBIEO00221 500 aa7.46□□□□□ -1.22
COL9A1-206ENST00000470652 MAPK1P28482 360 aa7.46□□□□□ -1.22
COL9A1-206ENST00000470652 TMC7Q7Z402 723 aa7.46□□□□□ -1.22
COL9A1-206ENST00000470652 FBXO11Q86XK2 927 aa7.46□□□□□ -1.22
COL9A1-206ENST00000470652 MAP4K3Q8IVH8 894 aa7.46□□□□□ -1.22
COL9A1-206ENST00000470652 OSMRQ99650 979 aa7.46□□□□□ -1.22
COL9A1-206ENST00000470652 LACRTQ9GZZ8 138 aa7.46□□□□□ -1.22
COL9A1-206ENST00000470652 SRA1Q9HD15 236 aaKnown RBP7.46□□□□□ -1.22
COL9A1-206ENST00000470652 PDE2AO00408 941 aaPredicted RBP7.45□□□□□ -1.22
COL9A1-206ENST00000470652 GPR182O15218 404 aa7.45□□□□□ -1.22
COL9A1-206ENST00000470652 CPNE3O75131 537 aaKnown RBP7.45□□□□□ -1.22
COL9A1-206ENST00000470652 PTPRAP18433 802 aa7.45□□□□□ -1.22
COL9A1-206ENST00000470652 CDC27P30260 824 aa7.45□□□□□ -1.22
COL9A1-206ENST00000470652 TMEM102Q8N9M5 508 aaPredicted RBP7.45□□□□□ -1.22
COL9A1-206ENST00000470652 DCAF11Q8TEB1 546 aa7.45□□□□□ -1.22
COL9A1-206ENST00000470652 WFDC12Q8WWY7 111 aa7.45□□□□□ -1.22
COL9A1-206ENST00000470652 NIF3L1Q9GZT8 377 aa7.45□□□□□ -1.22
COL9A1-206ENST00000470652 ADAM19Q9H013 955 aa7.45□□□□□ -1.22
COL9A1-206ENST00000470652 DNAJC25Q9H1X3 360 aa7.45□□□□□ -1.22
COL9A1-206ENST00000470652 ACPPP15309 386 aa7.44□□□□□ -1.22
COL9A1-206ENST00000470652 IREB2P48200 963 aaKnown RBP7.44□□□□□ -1.22
COL9A1-206ENST00000470652 ORC1Q13415 861 aa7.44□□□□□ -1.22
COL9A1-206ENST00000470652 PEAR1Q5VY43 1037 aaPredicted RBP7.44□□□□□ -1.22
COL9A1-206ENST00000470652 GALNT12Q8IXK2 581 aa7.44□□□□□ -1.22
COL9A1-206ENST00000470652 ZKSCAN3Q9BRR0 538 aa7.44□□□□□ -1.22
COL9A1-206ENST00000470652 CCDC180Q9P1Z9 1646 aa7.43□□□□□ -1.22
COL9A1-206ENST00000470652 EIF1AYO14602 144 aaKnown RBP7.43□□□□□ -1.22
COL9A1-206ENST00000470652 TRPA1O75762 1119 aa7.43□□□□□ -1.22
COL9A1-206ENST00000470652 POLR3DP05423 398 aaPredicted RBP7.43□□□□□ -1.22
COL9A1-206ENST00000470652 FAM117BQ6P1L5 589 aa7.43□□□□□ -1.22
COL9A1-206ENST00000470652 ZSCAN29Q8IWY8 852 aaPredicted RBP7.43□□□□□ -1.22
COL9A1-206ENST00000470652 NXPE3Q969Y0 559 aa7.43□□□□□ -1.22
COL9A1-206ENST00000470652 LINC01387J3KSC0 135 aa7.42□□□□□ -1.22
COL9A1-206ENST00000470652 DEAF1O75398 565 aaPredicted RBP7.42□□□□□ -1.22
COL9A1-206ENST00000470652 CABP4P57796 275 aa7.42□□□□□ -1.22
COL9A1-206ENST00000470652 PLCB3Q01970 1234 aa7.42□□□□□ -1.22
COL9A1-206ENST00000470652 SETDB1Q15047 1291 aa7.42□□□□□ -1.22
COL9A1-206ENST00000470652 IGF2-ASQ6U949 168 aa7.42□□□□□ -1.22
COL9A1-206ENST00000470652 LATS2Q9NRM7 1088 aa7.42□□□□□ -1.22
COL9A1-206ENST00000470652 RNF112Q9ULX5 631 aa7.42□□□□□ -1.22
COL9A1-206ENST00000470652 DLL1O00548 723 aa7.41□□□□□ -1.22
COL9A1-206ENST00000470652 TREHO43280 583 aa7.41□□□□□ -1.22
COL9A1-206ENST00000470652 NOS3P29474 1203 aa7.41□□□□□ -1.22
COL9A1-206ENST00000470652 KIAA0319Q5VV43 1072 aa7.41□□□□□ -1.22
COL9A1-206ENST00000470652 USPL1Q5W0Q7 1092 aa7.41□□□□□ -1.22
COL9A1-206ENST00000470652 ADAMTSL4Q6UY14 1074 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms