RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 CELF1Q92879 486 aaKnown RBP10.05□□□□□ -0.8
NPHP3-204ENST00000469232 EAF2Q96CJ1 260 aaPredicted RBP10.05□□□□□ -0.8
NPHP3-204ENST00000469232 L3MBTL3Q96JM7 780 aaPredicted RBP10.05□□□□□ -0.8
NPHP3-204ENST00000469232 CHMP3Q9Y3E7 222 aa10.05□□□□□ -0.8
NPHP3-204ENST00000469232 LTBP1Q14766 1721 aa10.05□□□□□ -0.8
NPHP3-204ENST00000469232 ARAP2Q8WZ64 1704 aa10.05□□□□□ -0.8
NPHP3-204ENST00000469232 BBOX1O75936 387 aa10.04□□□□□ -0.8
NPHP3-204ENST00000469232 PDE8BO95263 885 aa10.04□□□□□ -0.8
NPHP3-204ENST00000469232 NPR1P16066 1061 aa10.04□□□□□ -0.8
NPHP3-204ENST00000469232 PDE1AP54750 535 aa10.04□□□□□ -0.8
NPHP3-204ENST00000469232 TFCP2Q12800 502 aa10.04□□□□□ -0.8
NPHP3-204ENST00000469232 TNNI3KQ59H18 835 aa10.04□□□□□ -0.8
NPHP3-204ENST00000469232 STYK1Q6J9G0 422 aa10.04□□□□□ -0.8
NPHP3-204ENST00000469232 DDX46Q7L014 1031 aaKnown RBP10.04□□□□□ -0.8
NPHP3-204ENST00000469232 ANKRD18AQ8IVF6 992 aa10.04□□□□□ -0.8
NPHP3-204ENST00000469232 C16orf71Q8IYS4 520 aaPredicted RBP10.04□□□□□ -0.8
NPHP3-204ENST00000469232 CLASRPQ8N2M8 674 aaKnown RBP10.04□□□□□ -0.8
NPHP3-204ENST00000469232 CCDC24Q8N4L8 307 aa10.04□□□□□ -0.8
NPHP3-204ENST00000469232 OTUD7AQ8TE49 926 aaPredicted RBP10.04□□□□□ -0.8
NPHP3-204ENST00000469232 SIL1Q9H173 461 aa10.04□□□□□ -0.8
NPHP3-204ENST00000469232 FPGT-TNNI3KV9GXZ4 949 aa10.04□□□□□ -0.8
NPHP3-204ENST00000469232 SNED1Q8TER0 1413 aa10.04□□□□□ -0.8
NPHP3-204ENST00000469232 TAF1P21675 1872 aa10.04□□□□□ -0.8
NPHP3-204ENST00000469232 IGHMBP2P38935 993 aaKnown RBP10.04□□□□□ -0.8
NPHP3-204ENST00000469232 SKAP1Q86WV1 359 aa10.04□□□□□ -0.8
NPHP3-204ENST00000469232 SLAIN1Q8ND83 568 aa10.04□□□□□ -0.8
NPHP3-204ENST00000469232 RBM17Q96I25 401 aaKnown RBP10.04□□□□□ -0.8
NPHP3-204ENST00000469232 CCDC85AQ96PX6 553 aaPredicted RBP10.04□□□□□ -0.8
NPHP3-204ENST00000469232 IL1RAPL2Q9NP60 686 aa10.04□□□□□ -0.8
NPHP3-204ENST00000469232 CEP126Q9P2H0 1117 aa10.04□□□□□ -0.8
NPHP3-204ENST00000469232 MINPP1Q9UNW1 487 aa10.04□□□□□ -0.8
NPHP3-204ENST00000469232 STK24Q9Y6E0 443 aa10.04□□□□□ -0.8
NPHP3-204ENST00000469232 TTC41PQ6P2S7 1318 aa10.03□□□□□ -0.8
NPHP3-204ENST00000469232 IRS2Q9Y4H2 1338 aa10.03□□□□□ -0.8
NPHP3-204ENST00000469232 STK25O00506 426 aa10.03□□□□□ -0.8
NPHP3-204ENST00000469232 MX1P20591 662 aa10.03□□□□□ -0.8
NPHP3-204ENST00000469232 BMP2KLQ5H9B9 411 aa10.03□□□□□ -0.8
NPHP3-204ENST00000469232 TAF7LQ5H9L4 462 aa10.03□□□□□ -0.8
NPHP3-204ENST00000469232 C15orf52Q6ZUT6 534 aaKnown RBP10.03□□□□□ -0.8
NPHP3-204ENST00000469232 PI4K2BQ8TCG2 481 aa10.03□□□□□ -0.8
NPHP3-204ENST00000469232 MASTLQ96GX5 879 aa10.03□□□□□ -0.8
NPHP3-204ENST00000469232 ZNF512BQ96KM6 892 aaPredicted RBP10.03□□□□□ -0.8
NPHP3-204ENST00000469232 MPHOSPH8Q99549 860 aa10.03□□□□□ -0.8
NPHP3-204ENST00000469232 PODXL2Q9NZ53 605 aa10.03□□□□□ -0.8
NPHP3-204ENST00000469232 DBNLQ9UJU6 430 aaKnown RBP10.03□□□□□ -0.8
NPHP3-204ENST00000469232 AKAP2Q9Y2D5 859 aa10.03□□□□□ -0.8
NPHP3-204ENST00000469232 KCNA3P22001 575 aa10.02□□□□□ -0.81
NPHP3-204ENST00000469232 ALDH1B1P30837 517 aa10.02□□□□□ -0.81
NPHP3-204ENST00000469232 CHRNDQ07001 517 aa10.02□□□□□ -0.81
NPHP3-204ENST00000469232 OS9Q13438 667 aaPredicted RBP10.02□□□□□ -0.81
NPHP3-204ENST00000469232 UBE4AQ14139 1066 aa10.02□□□□□ -0.81
NPHP3-204ENST00000469232 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.02□□□□□ -0.81
NPHP3-204ENST00000469232 C7orf43Q8WVR3 580 aa10.02□□□□□ -0.81
NPHP3-204ENST00000469232 RPGRQ92834 1020 aaKnown RBP10.02□□□□□ -0.81
NPHP3-204ENST00000469232 CNNM1Q9NRU3 951 aa10.02□□□□□ -0.81
NPHP3-204ENST00000469232 SPEF2Q9C093 1822 aa10.01□□□□□ -0.81
NPHP3-204ENST00000469232 A0A1B0GUL7 405 aa10.01□□□□□ -0.81
NPHP3-204ENST00000469232 ZBTB7AO95365 584 aa10.01□□□□□ -0.81
NPHP3-204ENST00000469232 ATP5JP18859 108 aa10.01□□□□□ -0.81
NPHP3-204ENST00000469232 TGFB2P61812 414 aa10.01□□□□□ -0.81
NPHP3-204ENST00000469232 PUM3Q15397 648 aaKnown RBP10.01□□□□□ -0.81
NPHP3-204ENST00000469232 METTL24Q5JXM2 366 aa10.01□□□□□ -0.81
NPHP3-204ENST00000469232 TTC22Q5TAA0 569 aa10.01□□□□□ -0.81
NPHP3-204ENST00000469232 AACSQ86V21 672 aa10.01□□□□□ -0.81
NPHP3-204ENST00000469232 TICAM2Q86XR7 235 aa10.01□□□□□ -0.81
NPHP3-204ENST00000469232 SP8Q8IXZ3 490 aa10.01□□□□□ -0.81
NPHP3-204ENST00000469232 LPIN2Q92539 896 aa10.01□□□□□ -0.81
NPHP3-204ENST00000469232 ANKRD2Q9GZV1 360 aa10.01□□□□□ -0.81
NPHP3-204ENST00000469232 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.01□□□□□ -0.81
NPHP3-204ENST00000469232 CD2APQ9Y5K6 639 aa10.01□□□□□ -0.81
NPHP3-204ENST00000469232 ZNF804BA4D1E1 1349 aa10□□□□□ -0.81
NPHP3-204ENST00000469232 APBB1O00213 710 aa10□□□□□ -0.81
NPHP3-204ENST00000469232 NPHP1O15259 732 aa10□□□□□ -0.81
NPHP3-204ENST00000469232 GSPT1P15170 499 aaKnown RBP10□□□□□ -0.81
NPHP3-204ENST00000469232 POLD1P28340 1107 aa10□□□□□ -0.81
NPHP3-204ENST00000469232 ECHDC1Q9NTX5 307 aa10□□□□□ -0.81
NPHP3-204ENST00000469232 TLR7Q9NYK1 1049 aaKnown RBP10□□□□□ -0.81
NPHP3-204ENST00000469232 ATP6V0A2Q9Y487 856 aa10□□□□□ -0.81
NPHP3-204ENST00000469232 BRCA1P38398 1863 aaKnown RBP10□□□□□ -0.81
NPHP3-204ENST00000469232 H0YIN7 160 aa10□□□□□ -0.81
NPHP3-204ENST00000469232 GLRX3O76003 335 aaKnown RBP10□□□□□ -0.81
NPHP3-204ENST00000469232 IFIT2P09913 472 aaKnown RBP10□□□□□ -0.81
NPHP3-204ENST00000469232 ATP2B3Q16720 1220 aa10□□□□□ -0.81
NPHP3-204ENST00000469232 C2CD5Q86YS7 1000 aa10□□□□□ -0.81
NPHP3-204ENST00000469232 CNKSR1Q969H4 720 aa10□□□□□ -0.81
NPHP3-204ENST00000469232 DBNDD2Q9BQY9 259 aa10□□□□□ -0.81
NPHP3-204ENST00000469232 LEMD3Q9Y2U8 911 aa10□□□□□ -0.81
NPHP3-204ENST00000469232 DUOX1Q9NRD9 1551 aa9.99□□□□□ -0.81
NPHP3-204ENST00000469232 XDHP47989 1333 aa9.99□□□□□ -0.81
NPHP3-204ENST00000469232 PSDA5PKW4 1024 aaPredicted RBP9.99□□□□□ -0.81
NPHP3-204ENST00000469232 RGS3P49796 1198 aa9.99□□□□□ -0.81
NPHP3-204ENST00000469232 TIMM10P62072 90 aa9.99□□□□□ -0.81
NPHP3-204ENST00000469232 CC2D2BQ6DHV5 1058 aa9.99□□□□□ -0.81
NPHP3-204ENST00000469232 FBXO33Q7Z6M2 555 aa9.99□□□□□ -0.81
NPHP3-204ENST00000469232 XAGE2Q96GT9 111 aa9.99□□□□□ -0.81
NPHP3-204ENST00000469232 CCDC8Q9H0W5 538 aaPredicted RBP9.99□□□□□ -0.81
NPHP3-204ENST00000469232 SLX4Q8IY92 1834 aa9.98□□□□□ -0.81
NPHP3-204ENST00000469232 ERC2O15083 957 aa9.98□□□□□ -0.81
NPHP3-204ENST00000469232 ARID4AP29374 1257 aaPredicted RBP9.98□□□□□ -0.81
NPHP3-204ENST00000469232 GRIPAP1Q4V328 841 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms