RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 KSR2Q6VAB6 950 aa16.86■□□□□ 0.29
PTPN7-207ENST00000468385 TSPYL6Q8N831 410 aa16.86■□□□□ 0.29
PTPN7-207ENST00000468385 MXD3Q9BW11 206 aa16.86■□□□□ 0.29
PTPN7-207ENST00000468385 GREM2Q9H772 168 aa16.86■□□□□ 0.29
PTPN7-207ENST00000468385 BSDC1Q9NW68 430 aaPredicted RBP16.86■□□□□ 0.29
PTPN7-207ENST00000468385 TNRC18O15417 2968 aaPredicted RBP16.85■□□□□ 0.29
PTPN7-207ENST00000468385 ZNF646O15015 1829 aaPredicted RBP16.85■□□□□ 0.29
PTPN7-207ENST00000468385 PI4KAP2A4QPH2 592 aa16.85■□□□□ 0.29
PTPN7-207ENST00000468385 SOX10P56693 466 aa16.85■□□□□ 0.29
PTPN7-207ENST00000468385 NBPF9Q3BBW0 867 aa16.85■□□□□ 0.29
PTPN7-207ENST00000468385 DACT2Q5SW24 774 aa16.85■□□□□ 0.29
PTPN7-207ENST00000468385 CTU1Q7Z7A3 348 aaKnown RBP16.85■□□□□ 0.29
PTPN7-207ENST00000468385 PI4KAP1Q8N8J0 262 aa16.85■□□□□ 0.29
PTPN7-207ENST00000468385 CCT4P50991 539 aaKnown RBP16.84■□□□□ 0.29
PTPN7-207ENST00000468385 PRAMEF18Q5VWM3 479 aa16.84■□□□□ 0.29
PTPN7-207ENST00000468385 CHMP4AQ9BY43 222 aa16.84■□□□□ 0.29
PTPN7-207ENST00000468385 UBE2Q2LH0YL09 131 aa16.83■□□□□ 0.28
PTPN7-207ENST00000468385 WNT10BO00744 389 aa16.83■□□□□ 0.28
PTPN7-207ENST00000468385 CWF19L2Q2TBE0 894 aaKnown RBP16.83■□□□□ 0.28
PTPN7-207ENST00000468385 SPEF2Q9C093 1822 aa16.82■□□□□ 0.28
PTPN7-207ENST00000468385 NEURL1BA8MQ27 555 aa16.82■□□□□ 0.28
PTPN7-207ENST00000468385 STRIP1Q5VSL9 837 aa16.82■□□□□ 0.28
PTPN7-207ENST00000468385 TXNRD3Q86VQ6 643 aa16.82■□□□□ 0.28
PTPN7-207ENST00000468385 COA1Q9GZY4 146 aa16.82■□□□□ 0.28
PTPN7-207ENST00000468385 MYO3BQ8WXR4 1341 aa16.81■□□□□ 0.28
PTPN7-207ENST00000468385 MYH3P11055 1940 aa16.81■□□□□ 0.28
PTPN7-207ENST00000468385 NEXNQ0ZGT2 675 aa16.81■□□□□ 0.28
PTPN7-207ENST00000468385 OGFOD1Q8N543 542 aa16.81■□□□□ 0.28
PTPN7-207ENST00000468385 TSR2Q969E8 191 aaKnown RBP16.81■□□□□ 0.28
PTPN7-207ENST00000468385 FBXW7Q969H0 707 aa16.81■□□□□ 0.28
PTPN7-207ENST00000468385 LEMD3Q9Y2U8 911 aa16.81■□□□□ 0.28
PTPN7-207ENST00000468385 H7C1W4 665 aa16.8■□□□□ 0.28
PTPN7-207ENST00000468385 TBC1D8O95759 1140 aa16.8■□□□□ 0.28
PTPN7-207ENST00000468385 TM4SF4P48230 202 aa16.8■□□□□ 0.28
PTPN7-207ENST00000468385 G2E3Q7L622 706 aa16.8■□□□□ 0.28
PTPN7-207ENST00000468385 ZNF296Q8WUU4 475 aaPredicted RBP16.8■□□□□ 0.28
PTPN7-207ENST00000468385 HPS5Q9UPZ3 1129 aa16.8■□□□□ 0.28
PTPN7-207ENST00000468385 SASH1O94885 1247 aa16.79■□□□□ 0.28
PTPN7-207ENST00000468385 KLRK1P26718 216 aa16.79■□□□□ 0.28
PTPN7-207ENST00000468385 IGHMBP2P38935 993 aaKnown RBP16.79■□□□□ 0.28
PTPN7-207ENST00000468385 TTLL12Q14166 644 aaPredicted RBP16.79■□□□□ 0.28
PTPN7-207ENST00000468385 UBE3BQ7Z3V4 1068 aa16.79■□□□□ 0.28
PTPN7-207ENST00000468385 PLA2G12BQ9BX93 195 aa16.79■□□□□ 0.28
PTPN7-207ENST00000468385 STK31Q9BXU1 1019 aa16.79■□□□□ 0.28
PTPN7-207ENST00000468385 ZNF804BA4D1E1 1349 aa16.78■□□□□ 0.28
PTPN7-207ENST00000468385 MMP14P50281 582 aa16.78■□□□□ 0.28
PTPN7-207ENST00000468385 TTLL5Q6EMB2 1281 aa16.78■□□□□ 0.28
PTPN7-207ENST00000468385 ZBED3Q96IU2 234 aaPredicted RBP16.78■□□□□ 0.28
PTPN7-207ENST00000468385 HDAC9Q9UKV0 1011 aa16.78■□□□□ 0.28
PTPN7-207ENST00000468385 ITGA6P23229 1130 aa16.77■□□□□ 0.28
PTPN7-207ENST00000468385 NF2P35240 595 aa16.77■□□□□ 0.28
PTPN7-207ENST00000468385 CASP7P55210 303 aa16.77■□□□□ 0.28
PTPN7-207ENST00000468385 MKRN3Q13064 507 aaKnown RBP16.77■□□□□ 0.28
PTPN7-207ENST00000468385 PKN2Q16513 984 aaKnown RBP16.77■□□□□ 0.28
PTPN7-207ENST00000468385 KIAA0825Q8IV33 1275 aa16.77■□□□□ 0.28
PTPN7-207ENST00000468385 GPR25O00155 361 aa16.76■□□□□ 0.27
PTPN7-207ENST00000468385 SLC4A2P04920 1241 aa16.76■□□□□ 0.27
PTPN7-207ENST00000468385 CSF1RP07333 972 aa16.76■□□□□ 0.27
PTPN7-207ENST00000468385 PTPN12Q05209 780 aaKnown RBP16.76■□□□□ 0.27
PTPN7-207ENST00000468385 GCKRQ14397 625 aa16.76■□□□□ 0.27
PTPN7-207ENST00000468385 TWISTNBQ3B726 338 aaPredicted RBP16.76■□□□□ 0.27
PTPN7-207ENST00000468385 NOM1Q5C9Z4 860 aaKnown RBP16.76■□□□□ 0.27
PTPN7-207ENST00000468385 APOBEC3FQ8IUX4 373 aaKnown RBP16.76■□□□□ 0.27
PTPN7-207ENST00000468385 ANKRD2Q9GZV1 360 aa16.76■□□□□ 0.27
PTPN7-207ENST00000468385 GTF2IP78347 998 aa16.75■□□□□ 0.27
PTPN7-207ENST00000468385 SREBF2Q12772 1141 aa16.75■□□□□ 0.27
PTPN7-207ENST00000468385 PRKG1Q13976 671 aa16.75■□□□□ 0.27
PTPN7-207ENST00000468385 CCDC27Q2M243 656 aa16.75■□□□□ 0.27
PTPN7-207ENST00000468385 ARMC9Q7Z3E5 817 aa16.75■□□□□ 0.27
PTPN7-207ENST00000468385 MPHOSPH8Q99549 860 aa16.75■□□□□ 0.27
PTPN7-207ENST00000468385 CFHR5Q9BXR6 569 aa16.75■□□□□ 0.27
PTPN7-207ENST00000468385 IRS2Q9Y4H2 1338 aa16.74■□□□□ 0.27
PTPN7-207ENST00000468385 CHRNDQ07001 517 aa16.74■□□□□ 0.27
PTPN7-207ENST00000468385 FLIIQ13045 1269 aa16.74■□□□□ 0.27
PTPN7-207ENST00000468385 LDLRAD1Q5T700 205 aa16.74■□□□□ 0.27
PTPN7-207ENST00000468385 WWC1Q8IX03 1113 aa16.74■□□□□ 0.27
PTPN7-207ENST00000468385 R3HDMLQ9H3Y0 253 aa16.74■□□□□ 0.27
PTPN7-207ENST00000468385 CD209Q9NNX6 404 aa16.74■□□□□ 0.27
PTPN7-207ENST00000468385 PDE4DIPQ5VU43 2346 aa16.73■□□□□ 0.27
PTPN7-207ENST00000468385 SNAP23O00161 211 aa16.73■□□□□ 0.27
PTPN7-207ENST00000468385 SPRYD7Q5W111 196 aa16.73■□□□□ 0.27
PTPN7-207ENST00000468385 CERS5Q8N5B7 392 aa16.73■□□□□ 0.27
PTPN7-207ENST00000468385 ANGEL1Q9UNK9 670 aaKnown RBP16.73■□□□□ 0.27
PTPN7-207ENST00000468385 FZD1Q9UP38 647 aa16.73■□□□□ 0.27
PTPN7-207ENST00000468385 COL1A1P02452 1464 aaPredicted RBP16.73■□□□□ 0.27
PTPN7-207ENST00000468385 KCNJ4P48050 445 aa16.72■□□□□ 0.27
PTPN7-207ENST00000468385 CCDC184Q52MB2 194 aa16.72■□□□□ 0.27
PTPN7-207ENST00000468385 PRPF38BQ5VTL8 546 aaKnown RBP16.72■□□□□ 0.27
PTPN7-207ENST00000468385 FBXO46Q6PJ61 603 aaPredicted RBP16.72■□□□□ 0.27
PTPN7-207ENST00000468385 DNAAF4Q8WXU2 420 aa16.72■□□□□ 0.27
PTPN7-207ENST00000468385 MYH16Q9H6N6 1097 aa16.72■□□□□ 0.27
PTPN7-207ENST00000468385 PCDH10Q9P2E7 1040 aa16.72■□□□□ 0.27
PTPN7-207ENST00000468385 FKTNO75072 461 aa16.71■□□□□ 0.27
PTPN7-207ENST00000468385 TAF5LO75529 589 aa16.71■□□□□ 0.27
PTPN7-207ENST00000468385 FKBP5Q13451 457 aaPredicted RBP16.71■□□□□ 0.27
PTPN7-207ENST00000468385 MAP3K11Q16584 847 aa16.71■□□□□ 0.27
PTPN7-207ENST00000468385 C15orf52Q6ZUT6 534 aaKnown RBP16.71■□□□□ 0.27
PTPN7-207ENST00000468385 MTMR14Q8NCE2 650 aa16.71■□□□□ 0.27
PTPN7-207ENST00000468385 LINS1Q8NG48 757 aa16.71■□□□□ 0.27
PTPN7-207ENST00000468385 DEFB129Q9H1M3 183 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms