RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 PSME4Q14997 1843 aa18.8■□□□□ 0.6
ATPAF2-204ENST00000467560 USP17L3A6NCW0 530 aa18.8■□□□□ 0.6
ATPAF2-204ENST00000467560 USP17L4A6NCW7 530 aa18.8■□□□□ 0.6
ATPAF2-204ENST00000467560 ECE1P42892 770 aa18.8■□□□□ 0.6
ATPAF2-204ENST00000467560 SCARF1Q14162 830 aa18.8■□□□□ 0.6
ATPAF2-204ENST00000467560 DACT2Q5SW24 774 aa18.8■□□□□ 0.6
ATPAF2-204ENST00000467560 USP17L1Q7RTZ2 530 aa18.8■□□□□ 0.6
ATPAF2-204ENST00000467560 ZIC5Q96T25 663 aa18.8■□□□□ 0.6
ATPAF2-204ENST00000467560 PRDM10Q9NQV6 1147 aa18.8■□□□□ 0.6
ATPAF2-204ENST00000467560 SCAF8Q9UPN6 1271 aaKnown RBP18.8■□□□□ 0.6
ATPAF2-204ENST00000467560 POLR2AP24928 1970 aaKnown RBP18.8■□□□□ 0.6
ATPAF2-204ENST00000467560 ZNF646O15015 1829 aaPredicted RBP18.79■□□□□ 0.6
ATPAF2-204ENST00000467560 ZNF804BA4D1E1 1349 aa18.79■□□□□ 0.6
ATPAF2-204ENST00000467560 USP17L8P0C7I0 530 aa18.79■□□□□ 0.6
ATPAF2-204ENST00000467560 MAP2K1Q02750 393 aaPredicted RBP18.79■□□□□ 0.6
ATPAF2-204ENST00000467560 CHRNDQ07001 517 aa18.79■□□□□ 0.6
ATPAF2-204ENST00000467560 DCPSQ96C86 337 aaKnown RBP18.79■□□□□ 0.6
ATPAF2-204ENST00000467560 MPHOSPH8Q99549 860 aa18.79■□□□□ 0.6
ATPAF2-204ENST00000467560 LEMD3Q9Y2U8 911 aa18.79■□□□□ 0.6
ATPAF2-204ENST00000467560 IRS2Q9Y4H2 1338 aa18.78■□□□□ 0.6
ATPAF2-204ENST00000467560 TAF5LO75529 589 aa18.78■□□□□ 0.6
ATPAF2-204ENST00000467560 ANGEL2Q5VTE6 544 aaKnown RBP18.78■□□□□ 0.6
ATPAF2-204ENST00000467560 LMBR1LQ6UX01 489 aa18.78■□□□□ 0.6
ATPAF2-204ENST00000467560 HELBQ8NG08 1087 aaPredicted RBP18.78■□□□□ 0.6
ATPAF2-204ENST00000467560 HHIPL1Q96JK4 782 aa18.78■□□□□ 0.6
ATPAF2-204ENST00000467560 MYOZ2Q9NPC6 264 aa18.78■□□□□ 0.6
ATPAF2-204ENST00000467560 ANKRD18BA2A2Z9 1011 aa18.77■□□□□ 0.6
ATPAF2-204ENST00000467560 GRM8O00222 908 aa18.77■□□□□ 0.6
ATPAF2-204ENST00000467560 HUNKP57058 714 aa18.77■□□□□ 0.6
ATPAF2-204ENST00000467560 SLC4A10Q6U841 1118 aa18.77■□□□□ 0.6
ATPAF2-204ENST00000467560 KAZALD1Q96I82 304 aa18.77■□□□□ 0.6
ATPAF2-204ENST00000467560 ZNF594Q96JF6 807 aaPredicted RBP18.77■□□□□ 0.6
ATPAF2-204ENST00000467560 ANKRD2Q9GZV1 360 aa18.77■□□□□ 0.6
ATPAF2-204ENST00000467560 COA1Q9GZY4 146 aa18.77■□□□□ 0.6
ATPAF2-204ENST00000467560 TSKSQ9UJT2 592 aa18.77■□□□□ 0.6
ATPAF2-204ENST00000467560 MAP2K2P36507 400 aa18.76■□□□□ 0.59
ATPAF2-204ENST00000467560 NBPF9Q3BBW0 867 aa18.76■□□□□ 0.59
ATPAF2-204ENST00000467560 MRPL50Q8N5N7 158 aaKnown RBP18.76■□□□□ 0.59
ATPAF2-204ENST00000467560 FBXW7Q969H0 707 aa18.76■□□□□ 0.59
ATPAF2-204ENST00000467560 CDCA5Q96FF9 252 aa18.76■□□□□ 0.59
ATPAF2-204ENST00000467560 CHMP3Q9Y3E7 222 aa18.76■□□□□ 0.59
ATPAF2-204ENST00000467560 IFIT5Q13325 482 aaKnown RBP18.75■□□□□ 0.59
ATPAF2-204ENST00000467560 STRIP1Q5VSL9 837 aa18.75■□□□□ 0.59
ATPAF2-204ENST00000467560 GBA2Q9HCG7 927 aaPredicted RBP18.75■□□□□ 0.59
ATPAF2-204ENST00000467560 FAM155AB1AL88 458 aaPredicted RBP18.74■□□□□ 0.59
ATPAF2-204ENST00000467560 SULF1Q8IWU6 871 aa18.74■□□□□ 0.59
ATPAF2-204ENST00000467560 SUCLG2Q96I99 432 aa18.74■□□□□ 0.59
ATPAF2-204ENST00000467560 SRCIN1Q9C0H9 1055 aa18.74■□□□□ 0.59
ATPAF2-204ENST00000467560 ALDH1L1O75891 902 aa18.73■□□□□ 0.59
ATPAF2-204ENST00000467560 NBPF7P0C2Y1 421 aaPredicted RBP18.73■□□□□ 0.59
ATPAF2-204ENST00000467560 CDCA7LQ96GN5 454 aa18.73■□□□□ 0.59
ATPAF2-204ENST00000467560 C9orf78Q9NZ63 289 aaPredicted RBP18.73■□□□□ 0.59
ATPAF2-204ENST00000467560 SASH1O94885 1247 aa18.72■□□□□ 0.59
ATPAF2-204ENST00000467560 KCNJ4P48050 445 aa18.72■□□□□ 0.59
ATPAF2-204ENST00000467560 GTF2IP78347 998 aa18.72■□□□□ 0.59
ATPAF2-204ENST00000467560 SLFN5Q08AF3 891 aa18.72■□□□□ 0.59
ATPAF2-204ENST00000467560 PRAMEF18Q5VWM3 479 aa18.72■□□□□ 0.59
ATPAF2-204ENST00000467560 TTLL5Q6EMB2 1281 aa18.72■□□□□ 0.59
ATPAF2-204ENST00000467560 RGMBQ6NW40 437 aa18.72■□□□□ 0.59
ATPAF2-204ENST00000467560 MOB2Q70IA6 237 aa18.72■□□□□ 0.59
ATPAF2-204ENST00000467560 SSH1Q8WYL5 1049 aa18.72■□□□□ 0.59
ATPAF2-204ENST00000467560 CD209Q9NNX6 404 aa18.72■□□□□ 0.59
ATPAF2-204ENST00000467560 A0A1B0GUL6 1792 aa18.71■□□□□ 0.59
ATPAF2-204ENST00000467560 WNT10BO00744 389 aa18.71■□□□□ 0.59
ATPAF2-204ENST00000467560 BRPF1P55201 1214 aaPredicted RBP18.71■□□□□ 0.59
ATPAF2-204ENST00000467560 KIAA0825Q8IV33 1275 aa18.71■□□□□ 0.59
ATPAF2-204ENST00000467560 CERS5Q8N5B7 392 aa18.71■□□□□ 0.59
ATPAF2-204ENST00000467560 C2orf69Q8N8R5 385 aa18.71■□□□□ 0.59
ATPAF2-204ENST00000467560 PUS3Q9BZE2 481 aaKnown RBP18.71■□□□□ 0.59
ATPAF2-204ENST00000467560 E9PSI1 815 aa18.7■□□□□ 0.58
ATPAF2-204ENST00000467560 CCDC57Q2TAC2 916 aa18.7■□□□□ 0.58
ATPAF2-204ENST00000467560 C15orf52Q6ZUT6 534 aaKnown RBP18.7■□□□□ 0.58
ATPAF2-204ENST00000467560 BEGAINQ9BUH8 593 aa18.7■□□□□ 0.58
ATPAF2-204ENST00000467560 UTYO14607 1347 aa18.7■□□□□ 0.58
ATPAF2-204ENST00000467560 PITPNM2Q9BZ72 1349 aa18.7■□□□□ 0.58
ATPAF2-204ENST00000467560 PLIN1O60240 522 aa18.69■□□□□ 0.58
ATPAF2-204ENST00000467560 NOGQ13253 232 aa18.69■□□□□ 0.58
ATPAF2-204ENST00000467560 LDHAL6AQ6ZMR3 332 aa18.69■□□□□ 0.58
ATPAF2-204ENST00000467560 ZBED3Q96IU2 234 aaPredicted RBP18.69■□□□□ 0.58
ATPAF2-204ENST00000467560 JAG2Q9Y219 1238 aa18.69■□□□□ 0.58
ATPAF2-204ENST00000467560 PCDHAC2Q9Y5I4 1007 aa18.69■□□□□ 0.58
ATPAF2-204ENST00000467560 MYO3BQ8WXR4 1341 aa18.69■□□□□ 0.58
ATPAF2-204ENST00000467560 ZNF157P51786 506 aaPredicted RBP18.68■□□□□ 0.58
ATPAF2-204ENST00000467560 OGFOD1Q8N543 542 aa18.68■□□□□ 0.58
ATPAF2-204ENST00000467560 ANKRD44Q8N8A2 993 aa18.68■□□□□ 0.58
ATPAF2-204ENST00000467560 BICC1Q9H694 974 aaKnown RBP18.68■□□□□ 0.58
ATPAF2-204ENST00000467560 IL1R1P14778 569 aa18.67■□□□□ 0.58
ATPAF2-204ENST00000467560 KIF23Q02241 960 aaPredicted RBP18.67■□□□□ 0.58
ATPAF2-204ENST00000467560 TAF7LQ5H9L4 462 aa18.67■□□□□ 0.58
ATPAF2-204ENST00000467560 CNNM1Q9NRU3 951 aa18.67■□□□□ 0.58
ATPAF2-204ENST00000467560 AOX1Q06278 1338 aa18.67■□□□□ 0.58
ATPAF2-204ENST00000467560 SLC10A3P09131 477 aa18.66■□□□□ 0.58
ATPAF2-204ENST00000467560 RABL6Q3YEC7 729 aaPredicted RBP18.66■□□□□ 0.58
ATPAF2-204ENST00000467560 TRMT2AQ8IZ69 625 aaKnown RBP18.66■□□□□ 0.58
ATPAF2-204ENST00000467560 UBE2Q2LH0YL09 131 aa18.65■□□□□ 0.58
ATPAF2-204ENST00000467560 RASAL3Q86YV0 1011 aa18.65■□□□□ 0.58
ATPAF2-204ENST00000467560 CCDC102AQ96A19 550 aa18.65■□□□□ 0.58
ATPAF2-204ENST00000467560 RIPOR2Q9Y4F9 1068 aa18.65■□□□□ 0.58
ATPAF2-204ENST00000467560 F8W031 263 aaPredicted RBP18.64■□□□□ 0.57
ATPAF2-204ENST00000467560 GYG1P46976 350 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms