RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 NUTM1Q86Y26 1132 aa7.41□□□□□ -1.22
CXXC4-202ENST00000466963 MYH3P11055 1940 aa7.4□□□□□ -1.22
CXXC4-202ENST00000466963 CACNA1FO60840 1977 aa7.4□□□□□ -1.22
CXXC4-202ENST00000466963 ANGEL2Q5VTE6 544 aaKnown RBP7.4□□□□□ -1.22
CXXC4-202ENST00000466963 ANKRD18AQ8IVF6 992 aa7.4□□□□□ -1.22
CXXC4-202ENST00000466963 TRMT44Q8IYL2 757 aaKnown RBP7.4□□□□□ -1.22
CXXC4-202ENST00000466963 GRM1Q13255 1194 aa7.4□□□□□ -1.23
CXXC4-202ENST00000466963 TBC1D10BQ4KMP7 808 aaPredicted RBP7.4□□□□□ -1.23
CXXC4-202ENST00000466963 PRO3102Q9H379 93 aa7.4□□□□□ -1.23
CXXC4-202ENST00000466963 MAP4K4O95819 1239 aaPredicted RBP7.39□□□□□ -1.23
CXXC4-202ENST00000466963 GOLGA2Q08379 1002 aa7.39□□□□□ -1.23
CXXC4-202ENST00000466963 PDIA6Q15084 440 aa7.39□□□□□ -1.23
CXXC4-202ENST00000466963 TTLL7Q6ZT98 887 aa7.39□□□□□ -1.23
CXXC4-202ENST00000466963 TSPYL4Q9UJ04 414 aa7.39□□□□□ -1.23
CXXC4-202ENST00000466963 TRIM17Q9Y577 477 aa7.39□□□□□ -1.23
CXXC4-202ENST00000466963 ADM5C9JUS6 153 aa7.39□□□□□ -1.23
CXXC4-202ENST00000466963 CETPP11597 493 aa7.39□□□□□ -1.23
CXXC4-202ENST00000466963 GPSM2P81274 684 aa7.39□□□□□ -1.23
CXXC4-202ENST00000466963 OTUD5Q96G74 571 aa7.39□□□□□ -1.23
CXXC4-202ENST00000466963 NSFL1CQ9UNZ2 370 aaKnown RBP7.39□□□□□ -1.23
CXXC4-202ENST00000466963 MAST3O60307 1309 aa7.39□□□□□ -1.23
CXXC4-202ENST00000466963 KCNQ3O43525 872 aa7.38□□□□□ -1.23
CXXC4-202ENST00000466963 PPP2R1AP30153 589 aa7.38□□□□□ -1.23
CXXC4-202ENST00000466963 COPS6Q7L5N1 327 aa7.38□□□□□ -1.23
CXXC4-202ENST00000466963 SLAIN1Q8ND83 568 aa7.38□□□□□ -1.23
CXXC4-202ENST00000466963 TRIM47Q96LD4 638 aa7.38□□□□□ -1.23
CXXC4-202ENST00000466963 PLEKHF1Q96S99 279 aa7.38□□□□□ -1.23
CXXC4-202ENST00000466963 STXBP5LQ9Y2K9 1186 aa7.38□□□□□ -1.23
CXXC4-202ENST00000466963 KIF16BQ96L93 1317 aa7.38□□□□□ -1.23
CXXC4-202ENST00000466963 TMEM265A0A087WTH1 108 aa7.38□□□□□ -1.23
CXXC4-202ENST00000466963 UFL1O94874 794 aa7.38□□□□□ -1.23
CXXC4-202ENST00000466963 RALBP1Q15311 655 aa7.38□□□□□ -1.23
CXXC4-202ENST00000466963 DACT2Q5SW24 774 aa7.38□□□□□ -1.23
CXXC4-202ENST00000466963 CCDC24Q8N4L8 307 aa7.38□□□□□ -1.23
CXXC4-202ENST00000466963 SYMPKQ92797 1274 aaKnown RBP7.38□□□□□ -1.23
CXXC4-202ENST00000466963 PHACTR3Q96KR7 559 aa7.38□□□□□ -1.23
CXXC4-202ENST00000466963 POLLQ9UGP5 575 aa7.38□□□□□ -1.23
CXXC4-202ENST00000466963 TSKSQ9UJT2 592 aa7.38□□□□□ -1.23
CXXC4-202ENST00000466963 CHL1O00533 1208 aa7.38□□□□□ -1.23
CXXC4-202ENST00000466963 IRS4O14654 1257 aaPredicted RBP7.38□□□□□ -1.23
CXXC4-202ENST00000466963 GJB1P08034 283 aa7.38□□□□□ -1.23
CXXC4-202ENST00000466963 IRF5Q13568 498 aa7.38□□□□□ -1.23
CXXC4-202ENST00000466963 RNF39Q9H2S5 420 aa7.38□□□□□ -1.23
CXXC4-202ENST00000466963 ZBTB3Q9H5J0 574 aa7.38□□□□□ -1.23
CXXC4-202ENST00000466963 ZBTB12Q9Y330 459 aaPredicted RBP7.38□□□□□ -1.23
CXXC4-202ENST00000466963 RRP7AQ9Y3A4 280 aaKnown RBP7.38□□□□□ -1.23
CXXC4-202ENST00000466963 POLR2AP24928 1970 aaKnown RBP7.37□□□□□ -1.23
CXXC4-202ENST00000466963 ADGRA2Q96PE1 1338 aa7.37□□□□□ -1.23
CXXC4-202ENST00000466963 TTLL12Q14166 644 aaPredicted RBP7.37□□□□□ -1.23
CXXC4-202ENST00000466963 SLC9C1Q4G0N8 1177 aa7.37□□□□□ -1.23
CXXC4-202ENST00000466963 PXYLP1Q8TE99 480 aa7.37□□□□□ -1.23
CXXC4-202ENST00000466963 GPTP24298 496 aa7.37□□□□□ -1.23
CXXC4-202ENST00000466963 DCAF15Q66K64 600 aa7.37□□□□□ -1.23
CXXC4-202ENST00000466963 ANKRD23Q86SG2 305 aa7.37□□□□□ -1.23
CXXC4-202ENST00000466963 CWC25Q9NXE8 425 aaPredicted RBP7.37□□□□□ -1.23
CXXC4-202ENST00000466963 ANKIB1Q9P2G1 1089 aa7.37□□□□□ -1.23
CXXC4-202ENST00000466963 SERPINA10Q9UK55 444 aa7.37□□□□□ -1.23
CXXC4-202ENST00000466963 LRIT3Q3SXY7 679 aa7.36□□□□□ -1.23
CXXC4-202ENST00000466963 UBE2Q1Q7Z7E8 422 aa7.36□□□□□ -1.23
CXXC4-202ENST00000466963 GJA8P48165 433 aa7.36□□□□□ -1.23
CXXC4-202ENST00000466963 DLGAP5Q15398 846 aa7.36□□□□□ -1.23
CXXC4-202ENST00000466963 OLFM4Q6UX06 510 aa7.36□□□□□ -1.23
CXXC4-202ENST00000466963 MCM10Q7L590 875 aa7.36□□□□□ -1.23
CXXC4-202ENST00000466963 ZNF804AQ7Z570 1209 aa7.36□□□□□ -1.23
CXXC4-202ENST00000466963 FAM83AQ86UY5 434 aa7.36□□□□□ -1.23
CXXC4-202ENST00000466963 TBC1D22AQ8WUA7 517 aa7.36□□□□□ -1.23
CXXC4-202ENST00000466963 POLR3GLQ9BT43 218 aa7.36□□□□□ -1.23
CXXC4-202ENST00000466963 ZBTB7BO15156 539 aaPredicted RBP7.36□□□□□ -1.23
CXXC4-202ENST00000466963 TBC1D8O95759 1140 aa7.36□□□□□ -1.23
CXXC4-202ENST00000466963 IGHMBP2P38935 993 aaKnown RBP7.36□□□□□ -1.23
CXXC4-202ENST00000466963 PPIL2Q13356 520 aa7.36□□□□□ -1.23
CXXC4-202ENST00000466963 XAGE3Q8WTP9 111 aa7.36□□□□□ -1.23
CXXC4-202ENST00000466963 GTF3C2Q8WUA4 911 aaPredicted RBP7.36□□□□□ -1.23
CXXC4-202ENST00000466963 SCN9AQ15858 1988 aa7.35□□□□□ -1.23
CXXC4-202ENST00000466963 WNT10BO00744 389 aa7.35□□□□□ -1.23
CXXC4-202ENST00000466963 GINM1Q9NU53 330 aa7.35□□□□□ -1.23
CXXC4-202ENST00000466963 PDE4DIPQ5VU43 2346 aa7.35□□□□□ -1.23
CXXC4-202ENST00000466963 DLL1O00548 723 aa7.35□□□□□ -1.23
CXXC4-202ENST00000466963 IL1R1P14778 569 aa7.35□□□□□ -1.23
CXXC4-202ENST00000466963 PTPN12Q05209 780 aaKnown RBP7.35□□□□□ -1.23
CXXC4-202ENST00000466963 NEXNQ0ZGT2 675 aa7.35□□□□□ -1.23
CXXC4-202ENST00000466963 SNAPC2Q13487 334 aa7.35□□□□□ -1.23
CXXC4-202ENST00000466963 NGEFQ8N5V2 710 aa7.35□□□□□ -1.23
CXXC4-202ENST00000466963 ZIC5Q96T25 663 aa7.35□□□□□ -1.23
CXXC4-202ENST00000466963 DBNDD1Q9H9R9 158 aa7.35□□□□□ -1.23
CXXC4-202ENST00000466963 TAOK2Q9UL54 1235 aa7.35□□□□□ -1.23
CXXC4-202ENST00000466963 CSADQ9Y600 493 aa7.35□□□□□ -1.23
CXXC4-202ENST00000466963 TLR2O60603 784 aa7.34□□□□□ -1.23
CXXC4-202ENST00000466963 MYL6BP14649 208 aa7.34□□□□□ -1.23
CXXC4-202ENST00000466963 MAP3K9P80192 1104 aa7.34□□□□□ -1.23
CXXC4-202ENST00000466963 SLC4A8Q2Y0W8 1093 aa7.34□□□□□ -1.23
CXXC4-202ENST00000466963 NOL9Q5SY16 702 aaKnown RBP7.34□□□□□ -1.23
CXXC4-202ENST00000466963 ERO1BQ86YB8 467 aa7.34□□□□□ -1.23
CXXC4-202ENST00000466963 MYH16Q9H6N6 1097 aa7.34□□□□□ -1.23
CXXC4-202ENST00000466963 SPDYE5A6NIY4 337 aa7.34□□□□□ -1.23
CXXC4-202ENST00000466963 FAM177BA6PVY3 158 aa7.34□□□□□ -1.23
CXXC4-202ENST00000466963 PPATQ06203 517 aa7.34□□□□□ -1.23
CXXC4-202ENST00000466963 METTL22Q9BUU2 404 aaPredicted RBP7.34□□□□□ -1.23
CXXC4-202ENST00000466963 UBE2Q2LH0YL09 131 aa7.34□□□□□ -1.24
CXXC4-202ENST00000466963 CCT4P50991 539 aaKnown RBP7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms