RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 TAF1DQ9H5J8 278 aaPredicted RBP11.84□□□□□ -0.51
SDCCAG3-208ENST00000466579 PSMD14O00487 310 aa11.83□□□□□ -0.52
SDCCAG3-208ENST00000466579 RAD17O75943 681 aa11.83□□□□□ -0.52
SDCCAG3-208ENST00000466579 KLRK1P26718 216 aa11.83□□□□□ -0.52
SDCCAG3-208ENST00000466579 ATG9AQ7Z3C6 839 aa11.83□□□□□ -0.52
SDCCAG3-208ENST00000466579 ITPRIPQ8IWB1 547 aa11.83□□□□□ -0.52
SDCCAG3-208ENST00000466579 HELBQ8NG08 1087 aaPredicted RBP11.83□□□□□ -0.52
SDCCAG3-208ENST00000466579 DPF2Q92785 391 aa11.83□□□□□ -0.52
SDCCAG3-208ENST00000466579 KCNQ5Q9NR82 932 aa11.83□□□□□ -0.52
SDCCAG3-208ENST00000466579 HACL1Q9UJ83 578 aa11.83□□□□□ -0.52
SDCCAG3-208ENST00000466579 SNAP23O00161 211 aa11.82□□□□□ -0.52
SDCCAG3-208ENST00000466579 PDE8BO95263 885 aa11.82□□□□□ -0.52
SDCCAG3-208ENST00000466579 FGFR2P21802 821 aa11.82□□□□□ -0.52
SDCCAG3-208ENST00000466579 RPS12P25398 132 aaKnown RBP11.82□□□□□ -0.52
SDCCAG3-208ENST00000466579 GMPSP49915 693 aaPredicted RBP11.82□□□□□ -0.52
SDCCAG3-208ENST00000466579 FSTL1Q12841 308 aa11.82□□□□□ -0.52
SDCCAG3-208ENST00000466579 MVPQ14764 893 aaKnown RBP11.82□□□□□ -0.52
SDCCAG3-208ENST00000466579 GPRC5DQ9NZD1 345 aa11.82□□□□□ -0.52
SDCCAG3-208ENST00000466579 GJA3Q9Y6H8 435 aa11.82□□□□□ -0.52
SDCCAG3-208ENST00000466579 ZBTB22O15209 634 aa11.81□□□□□ -0.52
SDCCAG3-208ENST00000466579 SRGAP3O43295 1099 aa11.81□□□□□ -0.52
SDCCAG3-208ENST00000466579 PLIN1O60240 522 aa11.81□□□□□ -0.52
SDCCAG3-208ENST00000466579 IL1R1P14778 569 aa11.81□□□□□ -0.52
SDCCAG3-208ENST00000466579 EPHX2P34913 555 aa11.81□□□□□ -0.52
SDCCAG3-208ENST00000466579 IL15P40933 162 aaPredicted RBP11.81□□□□□ -0.52
SDCCAG3-208ENST00000466579 KCNJ4P48050 445 aa11.81□□□□□ -0.52
SDCCAG3-208ENST00000466579 ATP8B2P98198 1209 aa11.81□□□□□ -0.52
SDCCAG3-208ENST00000466579 POLA2Q14181 598 aa11.81□□□□□ -0.52
SDCCAG3-208ENST00000466579 METTL24Q5JXM2 366 aa11.81□□□□□ -0.52
SDCCAG3-208ENST00000466579 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.81□□□□□ -0.52
SDCCAG3-208ENST00000466579 SSH3Q8TE77 659 aa11.81□□□□□ -0.52
SDCCAG3-208ENST00000466579 YTHDC1Q96MU7 727 aaKnown RBP11.81□□□□□ -0.52
SDCCAG3-208ENST00000466579 GMLQ99445 158 aa11.81□□□□□ -0.52
SDCCAG3-208ENST00000466579 CD209Q9NNX6 404 aa11.81□□□□□ -0.52
SDCCAG3-208ENST00000466579 PNMA6EA0A0J9YXQ4 647 aa11.8□□□□□ -0.52
SDCCAG3-208ENST00000466579 USP17L3A6NCW0 530 aa11.8□□□□□ -0.52
SDCCAG3-208ENST00000466579 USP17L4A6NCW7 530 aa11.8□□□□□ -0.52
SDCCAG3-208ENST00000466579 EPS15P42566 896 aa11.8□□□□□ -0.52
SDCCAG3-208ENST00000466579 DACT2Q5SW24 774 aa11.8□□□□□ -0.52
SDCCAG3-208ENST00000466579 STRIP1Q5VSL9 837 aa11.8□□□□□ -0.52
SDCCAG3-208ENST00000466579 RSBN1LQ6PCB5 846 aaPredicted RBP11.8□□□□□ -0.52
SDCCAG3-208ENST00000466579 USP50Q70EL3 339 aaPredicted RBP11.8□□□□□ -0.52
SDCCAG3-208ENST00000466579 USP17L1Q7RTZ2 530 aa11.8□□□□□ -0.52
SDCCAG3-208ENST00000466579 FBXO33Q7Z6M2 555 aa11.8□□□□□ -0.52
SDCCAG3-208ENST00000466579 PNMA8AQ86V59 439 aaPredicted RBP11.8□□□□□ -0.52
SDCCAG3-208ENST00000466579 LDHDQ86WU2 507 aa11.8□□□□□ -0.52
SDCCAG3-208ENST00000466579 C16orf71Q8IYS4 520 aaPredicted RBP11.8□□□□□ -0.52
SDCCAG3-208ENST00000466579 SMC1BQ8NDV3 1235 aa11.8□□□□□ -0.52
SDCCAG3-208ENST00000466579 AGBL3Q8NEM8 1001 aa11.8□□□□□ -0.52
SDCCAG3-208ENST00000466579 FAM84BQ96KN1 310 aaPredicted RBP11.8□□□□□ -0.52
SDCCAG3-208ENST00000466579 ZBTB40Q9NUA8 1239 aa11.8□□□□□ -0.52
SDCCAG3-208ENST00000466579 DDX19BQ9UMR2 479 aa11.8□□□□□ -0.52
SDCCAG3-208ENST00000466579 PA2G4Q9UQ80 394 aaKnown RBP11.8□□□□□ -0.52
SDCCAG3-208ENST00000466579 ARAP2Q8WZ64 1704 aa11.8□□□□□ -0.52
SDCCAG3-208ENST00000466579 G3V3G9 751 aa11.79□□□□□ -0.52
SDCCAG3-208ENST00000466579 LMOD1P29536 600 aaPredicted RBP11.79□□□□□ -0.52
SDCCAG3-208ENST00000466579 MMP14P50281 582 aa11.79□□□□□ -0.52
SDCCAG3-208ENST00000466579 PUM3Q15397 648 aaKnown RBP11.79□□□□□ -0.52
SDCCAG3-208ENST00000466579 DCAF8Q5TAQ9 597 aa11.79□□□□□ -0.52
SDCCAG3-208ENST00000466579 C20orf194Q5TEA3 1177 aa11.79□□□□□ -0.52
SDCCAG3-208ENST00000466579 ZNF804AQ7Z570 1209 aa11.79□□□□□ -0.52
SDCCAG3-208ENST00000466579 ADARB2Q9NS39 739 aaKnown RBP11.79□□□□□ -0.52
SDCCAG3-208ENST00000466579 PGAP2Q9UHJ9 254 aa11.79□□□□□ -0.52
SDCCAG3-208ENST00000466579 ZBTB12Q9Y330 459 aaPredicted RBP11.79□□□□□ -0.52
SDCCAG3-208ENST00000466579 POTEIP0CG38 1075 aa11.78□□□□□ -0.52
SDCCAG3-208ENST00000466579 POTEJP0CG39 1038 aa11.78□□□□□ -0.52
SDCCAG3-208ENST00000466579 ZNF280AP59817 542 aaPredicted RBP11.78□□□□□ -0.52
SDCCAG3-208ENST00000466579 FKBP1AP62942 108 aaKnown RBP11.78□□□□□ -0.52
SDCCAG3-208ENST00000466579 CHADLQ6NUI6 762 aa11.78□□□□□ -0.52
SDCCAG3-208ENST00000466579 CEP85Q6P2H3 762 aa11.78□□□□□ -0.52
SDCCAG3-208ENST00000466579 TDRD7Q8NHU6 1098 aaKnown RBP11.78□□□□□ -0.52
SDCCAG3-208ENST00000466579 LPIN2Q92539 896 aa11.78□□□□□ -0.52
SDCCAG3-208ENST00000466579 SIL1Q9H173 461 aa11.78□□□□□ -0.52
SDCCAG3-208ENST00000466579 CHMP4BQ9H444 224 aaKnown RBP11.78□□□□□ -0.52
SDCCAG3-208ENST00000466579 CEP126Q9P2H0 1117 aa11.78□□□□□ -0.52
SDCCAG3-208ENST00000466579 CNOT7Q9UIV1 285 aaKnown RBP11.78□□□□□ -0.52
SDCCAG3-208ENST00000466579 COG6Q9Y2V7 657 aa11.78□□□□□ -0.52
SDCCAG3-208ENST00000466579 NOP58Q9Y2X3 529 aaKnown RBP11.78□□□□□ -0.52
SDCCAG3-208ENST00000466579 FAM205AQ6ZU69 1335 aa11.78□□□□□ -0.52
SDCCAG3-208ENST00000466579 MYO3BQ8WXR4 1341 aa11.78□□□□□ -0.52
SDCCAG3-208ENST00000466579 SASH1O94885 1247 aa11.77□□□□□ -0.53
SDCCAG3-208ENST00000466579 HIBADHP31937 336 aaKnown RBP11.77□□□□□ -0.53
SDCCAG3-208ENST00000466579 TTLL5Q6EMB2 1281 aa11.77□□□□□ -0.53
SDCCAG3-208ENST00000466579 MICALL2Q8IY33 904 aa11.77□□□□□ -0.53
SDCCAG3-208ENST00000466579 C1orf115Q9H7X2 142 aa11.77□□□□□ -0.53
SDCCAG3-208ENST00000466579 SHTN1A0MZ66 631 aa11.76□□□□□ -0.53
SDCCAG3-208ENST00000466579 H7C1D1 291 aa11.76□□□□□ -0.53
SDCCAG3-208ENST00000466579 IFIT1P09914 478 aaKnown RBP11.76□□□□□ -0.53
SDCCAG3-208ENST00000466579 GYG1P46976 350 aa11.76□□□□□ -0.53
SDCCAG3-208ENST00000466579 HIRAP54198 1017 aaPredicted RBP11.76□□□□□ -0.53
SDCCAG3-208ENST00000466579 RRP1P56182 461 aaKnown RBP11.76□□□□□ -0.53
SDCCAG3-208ENST00000466579 RPAP2Q8IXW5 612 aaPredicted RBP11.76□□□□□ -0.53
SDCCAG3-208ENST00000466579 ZC3H15Q8WU90 426 aaKnown RBP11.76□□□□□ -0.53
SDCCAG3-208ENST00000466579 ITGBL1O95965 494 aaPredicted RBP11.75□□□□□ -0.53
SDCCAG3-208ENST00000466579 SLC5A1P13866 664 aa11.75□□□□□ -0.53
SDCCAG3-208ENST00000466579 HSPA6P17066 643 aa11.75□□□□□ -0.53
SDCCAG3-208ENST00000466579 GTF2IP78347 998 aa11.75□□□□□ -0.53
SDCCAG3-208ENST00000466579 ATP2B3Q16720 1220 aa11.75□□□□□ -0.53
SDCCAG3-208ENST00000466579 CAVIN4Q5BKX8 364 aa11.75□□□□□ -0.53
SDCCAG3-208ENST00000466579 TRPM4Q8TD43 1214 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms