RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 USP17L3A6NCW0 530 aa15.25■□□□□ 0.03
CNOT4-208ENST00000465721 USP17L4A6NCW7 530 aa15.25■□□□□ 0.03
CNOT4-208ENST00000465721 USP17L1Q7RTZ2 530 aa15.25■□□□□ 0.03
CNOT4-208ENST00000465721 JARID2Q92833 1246 aaPredicted RBP15.25■□□□□ 0.03
CNOT4-208ENST00000465721 CWC25Q9NXE8 425 aaPredicted RBP15.25■□□□□ 0.03
CNOT4-208ENST00000465721 ADAMTS8Q9UP79 889 aa15.25■□□□□ 0.03
CNOT4-208ENST00000465721 HPS5Q9UPZ3 1129 aa15.25■□□□□ 0.03
CNOT4-208ENST00000465721 OTOFQ9HC10 1997 aa15.24■□□□□ 0.03
CNOT4-208ENST00000465721 WTIPA6NIX2 430 aaPredicted RBP15.24■□□□□ 0.03
CNOT4-208ENST00000465721 PODNQ7Z5L7 613 aa15.24■□□□□ 0.03
CNOT4-208ENST00000465721 ANKRD18AQ8IVF6 992 aa15.24■□□□□ 0.03
CNOT4-208ENST00000465721 IFT57Q9NWB7 429 aa15.24■□□□□ 0.03
CNOT4-208ENST00000465721 ATP2B4P23634 1241 aa15.23■□□□□ 0.03
CNOT4-208ENST00000465721 CTSWP56202 376 aa15.23■□□□□ 0.03
CNOT4-208ENST00000465721 NBPF9Q3BBW0 867 aa15.23■□□□□ 0.03
CNOT4-208ENST00000465721 DACT2Q5SW24 774 aa15.23■□□□□ 0.03
CNOT4-208ENST00000465721 PRPF38BQ5VTL8 546 aaKnown RBP15.23■□□□□ 0.03
CNOT4-208ENST00000465721 ZNF296Q8WUU4 475 aaPredicted RBP15.23■□□□□ 0.03
CNOT4-208ENST00000465721 METTL22Q9BUU2 404 aaPredicted RBP15.23■□□□□ 0.03
CNOT4-208ENST00000465721 UBE2Q2LH0YL09 131 aa15.22■□□□□ 0.03
CNOT4-208ENST00000465721 PRAMEF18Q5VWM3 479 aa15.22■□□□□ 0.03
CNOT4-208ENST00000465721 MXD3Q9BW11 206 aa15.22■□□□□ 0.03
CNOT4-208ENST00000465721 ELL2O00472 640 aaPredicted RBP15.21■□□□□ 0.03
CNOT4-208ENST00000465721 WNT10BO00744 389 aa15.21■□□□□ 0.03
CNOT4-208ENST00000465721 TBC1D8O95759 1140 aa15.21■□□□□ 0.03
CNOT4-208ENST00000465721 PKN2Q16513 984 aaKnown RBP15.21■□□□□ 0.03
CNOT4-208ENST00000465721 CDC5LQ99459 802 aaKnown RBP15.21■□□□□ 0.03
CNOT4-208ENST00000465721 MINPP1Q9UNW1 487 aa15.21■□□□□ 0.03
CNOT4-208ENST00000465721 IGKV5-2P06315 115 aa15.2■□□□□ 0.02
CNOT4-208ENST00000465721 TM4SF4P48230 202 aa15.2■□□□□ 0.02
CNOT4-208ENST00000465721 GNAI1P63096 354 aa15.2■□□□□ 0.02
CNOT4-208ENST00000465721 NOM1Q5C9Z4 860 aaKnown RBP15.2■□□□□ 0.02
CNOT4-208ENST00000465721 C8orf58Q8NAV2 365 aa15.2■□□□□ 0.02
CNOT4-208ENST00000465721 TTLL11Q8NHH1 800 aa15.2■□□□□ 0.02
CNOT4-208ENST00000465721 GREM2Q9H772 168 aa15.2■□□□□ 0.02
CNOT4-208ENST00000465721 ARAP2Q8WZ64 1704 aa15.2■□□□□ 0.02
CNOT4-208ENST00000465721 COL1A1P02452 1464 aaPredicted RBP15.2■□□□□ 0.02
CNOT4-208ENST00000465721 SSC5DA1L4H1 1573 aa15.19■□□□□ 0.02
CNOT4-208ENST00000465721 MYO3BQ8WXR4 1341 aa15.19■□□□□ 0.02
CNOT4-208ENST00000465721 CCT4P50991 539 aaKnown RBP15.19■□□□□ 0.02
CNOT4-208ENST00000465721 STRIP1Q5VSL9 837 aa15.19■□□□□ 0.02
CNOT4-208ENST00000465721 CFHR5Q9BXR6 569 aa15.19■□□□□ 0.02
CNOT4-208ENST00000465721 BSDC1Q9NW68 430 aaPredicted RBP15.19■□□□□ 0.02
CNOT4-208ENST00000465721 HDAC9Q9UKV0 1011 aa15.19■□□□□ 0.02
CNOT4-208ENST00000465721 MAP3K2Q9Y2U5 619 aa15.19■□□□□ 0.02
CNOT4-208ENST00000465721 CEP290O15078 2479 aa15.19■□□□□ 0.02
CNOT4-208ENST00000465721 GPR25O00155 361 aa15.18■□□□□ 0.02
CNOT4-208ENST00000465721 SASH1O94885 1247 aa15.18■□□□□ 0.02
CNOT4-208ENST00000465721 DDX58O95786 925 aaKnown RBP15.18■□□□□ 0.02
CNOT4-208ENST00000465721 TTLL12Q14166 644 aaPredicted RBP15.18■□□□□ 0.02
CNOT4-208ENST00000465721 TXNRD3Q86VQ6 643 aa15.18■□□□□ 0.02
CNOT4-208ENST00000465721 COA1Q9GZY4 146 aa15.18■□□□□ 0.02
CNOT4-208ENST00000465721 PI4KAP2A4QPH2 592 aa15.17■□□□□ 0.02
CNOT4-208ENST00000465721 APAF1O14727 1248 aa15.17■□□□□ 0.02
CNOT4-208ENST00000465721 KLRK1P26718 216 aa15.17■□□□□ 0.02
CNOT4-208ENST00000465721 NF2P35240 595 aa15.17■□□□□ 0.02
CNOT4-208ENST00000465721 CALD1Q05682 793 aaKnown RBP15.17■□□□□ 0.02
CNOT4-208ENST00000465721 MKRN3Q13064 507 aaKnown RBP15.17■□□□□ 0.02
CNOT4-208ENST00000465721 DDX10Q13206 875 aaKnown RBP15.17■□□□□ 0.02
CNOT4-208ENST00000465721 CCDC30Q5VVM6 783 aa15.17■□□□□ 0.02
CNOT4-208ENST00000465721 OGFOD1Q8N543 542 aa15.17■□□□□ 0.02
CNOT4-208ENST00000465721 PI4KAP1Q8N8J0 262 aa15.17■□□□□ 0.02
CNOT4-208ENST00000465721 ZBED3Q96IU2 234 aaPredicted RBP15.17■□□□□ 0.02
CNOT4-208ENST00000465721 PTPN12Q05209 780 aaKnown RBP15.16■□□□□ 0.02
CNOT4-208ENST00000465721 SREBF2Q12772 1141 aa15.16■□□□□ 0.02
CNOT4-208ENST00000465721 CWF19L2Q2TBE0 894 aaKnown RBP15.16■□□□□ 0.02
CNOT4-208ENST00000465721 FBXO46Q6PJ61 603 aaPredicted RBP15.16■□□□□ 0.02
CNOT4-208ENST00000465721 KSR2Q6VAB6 950 aa15.16■□□□□ 0.02
CNOT4-208ENST00000465721 TSPYL6Q8N831 410 aa15.16■□□□□ 0.02
CNOT4-208ENST00000465721 FBXW7Q969H0 707 aa15.16■□□□□ 0.02
CNOT4-208ENST00000465721 R3HDMLQ9H3Y0 253 aa15.16■□□□□ 0.02
CNOT4-208ENST00000465721 NEURL1BA8MQ27 555 aa15.15■□□□□ 0.02
CNOT4-208ENST00000465721 LDLRAD1Q5T700 205 aa15.15■□□□□ 0.02
CNOT4-208ENST00000465721 APOBEC3FQ8IUX4 373 aaKnown RBP15.15■□□□□ 0.02
CNOT4-208ENST00000465721 LEMD3Q9Y2U8 911 aa15.15■□□□□ 0.02
CNOT4-208ENST00000465721 FKTNO75072 461 aa15.14■□□□□ 0.01
CNOT4-208ENST00000465721 MMP14P50281 582 aa15.14■□□□□ 0.01
CNOT4-208ENST00000465721 SPRYD7Q5W111 196 aa15.14■□□□□ 0.01
CNOT4-208ENST00000465721 SAMD1Q6SPF0 538 aaPredicted RBP15.14■□□□□ 0.01
CNOT4-208ENST00000465721 ARMC9Q7Z3E5 817 aa15.14■□□□□ 0.01
CNOT4-208ENST00000465721 UBE3BQ7Z3V4 1068 aa15.14■□□□□ 0.01
CNOT4-208ENST00000465721 KIAA0825Q8IV33 1275 aa15.14■□□□□ 0.01
CNOT4-208ENST00000465721 U3KPZ7 1027 aaPredicted RBP15.14■□□□□ 0.01
CNOT4-208ENST00000465721 ZNF804BA4D1E1 1349 aa15.14■□□□□ 0.01
CNOT4-208ENST00000465721 IRS2Q9Y4H2 1338 aa15.14■□□□□ 0.01
CNOT4-208ENST00000465721 H7C1W4 665 aa15.13■□□□□ 0.01
CNOT4-208ENST00000465721 PRKG1Q13976 671 aa15.13■□□□□ 0.01
CNOT4-208ENST00000465721 TTLL5Q6EMB2 1281 aa15.13■□□□□ 0.01
CNOT4-208ENST00000465721 PLA2G12BQ9BX93 195 aa15.13■□□□□ 0.01
CNOT4-208ENST00000465721 PRKRIP1Q9H875 184 aaPredicted RBP15.13■□□□□ 0.01
CNOT4-208ENST00000465721 FZD1Q9UP38 647 aa15.13■□□□□ 0.01
CNOT4-208ENST00000465721 IGHMBP2P38935 993 aaKnown RBP15.12■□□□□ 0.01
CNOT4-208ENST00000465721 NEXNQ0ZGT2 675 aa15.12■□□□□ 0.01
CNOT4-208ENST00000465721 G2E3Q7L622 706 aa15.12■□□□□ 0.01
CNOT4-208ENST00000465721 TSR2Q969E8 191 aaKnown RBP15.12■□□□□ 0.01
CNOT4-208ENST00000465721 CHMP4AQ9BY43 222 aa15.12■□□□□ 0.01
CNOT4-208ENST00000465721 ANGEL1Q9UNK9 670 aaKnown RBP15.12■□□□□ 0.01
CNOT4-208ENST00000465721 ITGA6P23229 1130 aa15.11■□□□□ 0.01
CNOT4-208ENST00000465721 CASP7P55210 303 aa15.11■□□□□ 0.01
CNOT4-208ENST00000465721 GTF2IP78347 998 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms