RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 POP1Q99575 1024 aaKnown RBP10.55□□□□□ -0.72
SMC4-205ENST00000465563 SALL4Q9UJQ4 1053 aa10.55□□□□□ -0.72
SMC4-205ENST00000465563 FSCN2O14926 492 aa10.54□□□□□ -0.72
SMC4-205ENST00000465563 C1orf127Q8N9H9 656 aa10.54□□□□□ -0.72
SMC4-205ENST00000465563 KLHL23Q8NBE8 558 aa10.54□□□□□ -0.72
SMC4-205ENST00000465563 ADAM19Q9H013 955 aa10.54□□□□□ -0.72
SMC4-205ENST00000465563 SH2B1Q9NRF2 756 aaPredicted RBP10.54□□□□□ -0.72
SMC4-205ENST00000465563 EPHA1P21709 976 aa10.53□□□□□ -0.72
SMC4-205ENST00000465563 PMEPA1Q969W9 287 aa10.53□□□□□ -0.72
SMC4-205ENST00000465563 CARD10Q9BWT7 1032 aa10.53□□□□□ -0.72
SMC4-205ENST00000465563 A6NHS1 94 aa10.52□□□□□ -0.73
SMC4-205ENST00000465563 MTMR3Q13615 1198 aa10.52□□□□□ -0.73
SMC4-205ENST00000465563 ACAD11Q709F0 780 aa10.52□□□□□ -0.73
SMC4-205ENST00000465563 NBPF11Q86T75 865 aa10.52□□□□□ -0.73
SMC4-205ENST00000465563 SLC51AQ86UW1 340 aa10.52□□□□□ -0.73
SMC4-205ENST00000465563 C1orf115Q9H7X2 142 aa10.52□□□□□ -0.73
SMC4-205ENST00000465563 KCNK4Q9NYG8 393 aa10.52□□□□□ -0.73
SMC4-205ENST00000465563 MTMR7Q9Y216 660 aa10.52□□□□□ -0.73
SMC4-205ENST00000465563 TM4SF5O14894 197 aa10.51□□□□□ -0.73
SMC4-205ENST00000465563 WISP1O95388 367 aa10.51□□□□□ -0.73
SMC4-205ENST00000465563 CABP4P57796 275 aa10.51□□□□□ -0.73
SMC4-205ENST00000465563 AAMPQ13685 434 aa10.51□□□□□ -0.73
SMC4-205ENST00000465563 SEC31BQ9NQW1 1179 aa10.51□□□□□ -0.73
SMC4-205ENST00000465563 RNF112Q9ULX5 631 aa10.51□□□□□ -0.73
SMC4-205ENST00000465563 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.51□□□□□ -0.73
SMC4-205ENST00000465563 HYAL3O43820 417 aaPredicted RBP10.5□□□□□ -0.73
SMC4-205ENST00000465563 FAM13AO94988 1023 aa10.5□□□□□ -0.73
SMC4-205ENST00000465563 NPR3P17342 541 aa10.5□□□□□ -0.73
SMC4-205ENST00000465563 FSTP19883 344 aa10.5□□□□□ -0.73
SMC4-205ENST00000465563 UBL7Q96S82 380 aaPredicted RBP10.5□□□□□ -0.73
SMC4-205ENST00000465563 CEP41Q9BYV8 373 aa10.5□□□□□ -0.73
SMC4-205ENST00000465563 DZANK1Q9NVP4 752 aa10.5□□□□□ -0.73
SMC4-205ENST00000465563 POLIQ9UNA4 740 aa10.5□□□□□ -0.73
SMC4-205ENST00000465563 H3BRJ5 948 aa10.49□□□□□ -0.73
SMC4-205ENST00000465563 PDE2AO00408 941 aaPredicted RBP10.49□□□□□ -0.73
SMC4-205ENST00000465563 ACPPP15309 386 aa10.49□□□□□ -0.73
SMC4-205ENST00000465563 DUOXA2Q1HG44 320 aa10.49□□□□□ -0.73
SMC4-205ENST00000465563 WNT8BQ93098 351 aa10.49□□□□□ -0.73
SMC4-205ENST00000465563 CHRDQ9H2X0 955 aa10.49□□□□□ -0.73
SMC4-205ENST00000465563 NFKBIEO00221 500 aa10.48□□□□□ -0.73
SMC4-205ENST00000465563 PIP4K2BP78356 416 aa10.48□□□□□ -0.73
SMC4-205ENST00000465563 KLHDC7BQ96G42 594 aa10.48□□□□□ -0.73
SMC4-205ENST00000465563 RAXQ9Y2V3 346 aa10.48□□□□□ -0.73
SMC4-205ENST00000465563 DDX3YO15523 660 aaKnown RBP10.47□□□□□ -0.73
SMC4-205ENST00000465563 USP5P45974 858 aa10.47□□□□□ -0.73
SMC4-205ENST00000465563 SF3B2Q13435 895 aaKnown RBP10.47□□□□□ -0.73
SMC4-205ENST00000465563 PHLDB3Q6NSJ2 640 aa10.47□□□□□ -0.73
SMC4-205ENST00000465563 KIAA1211Q6ZU35 1233 aa10.47□□□□□ -0.73
SMC4-205ENST00000465563 FOXD4L4Q8WXT5 416 aaPredicted RBP10.47□□□□□ -0.73
SMC4-205ENST00000465563 DHX15O43143 795 aaKnown RBP10.46□□□□□ -0.73
SMC4-205ENST00000465563 FKBP4Q02790 459 aaKnown RBP eCLIP10.46□□□□□ -0.73
SMC4-205ENST00000465563 EHHADHQ08426 723 aa10.46□□□□□ -0.73
SMC4-205ENST00000465563 OSGEPQ9NPF4 335 aa10.46□□□□□ -0.73
SMC4-205ENST00000465563 ADAM11O75078 769 aa10.45□□□□□ -0.74
SMC4-205ENST00000465563 PHACTR2O75167 634 aa10.45□□□□□ -0.74
SMC4-205ENST00000465563 TNFRSF21O75509 655 aa10.45□□□□□ -0.74
SMC4-205ENST00000465563 TRPA1O75762 1119 aa10.45□□□□□ -0.74
SMC4-205ENST00000465563 UVSSAQ2YD98 709 aa10.45□□□□□ -0.74
SMC4-205ENST00000465563 TMEM102Q8N9M5 508 aaPredicted RBP10.45□□□□□ -0.74
SMC4-205ENST00000465563 SNX29Q8TEQ0 813 aa10.45□□□□□ -0.74
SMC4-205ENST00000465563 STOML1Q9UBI4 398 aa10.45□□□□□ -0.74
SMC4-205ENST00000465563 CARNS1A5YM72 827 aa10.44□□□□□ -0.74
SMC4-205ENST00000465563 EREGO14944 169 aa10.44□□□□□ -0.74
SMC4-205ENST00000465563 GSC2O15499 205 aa10.44□□□□□ -0.74
SMC4-205ENST00000465563 ABL1P00519 1130 aa10.44□□□□□ -0.74
SMC4-205ENST00000465563 C14orf37Q86TY3 774 aa10.44□□□□□ -0.74
SMC4-205ENST00000465563 UBASH3BQ8TF42 649 aa10.44□□□□□ -0.74
SMC4-205ENST00000465563 UTP4Q969X6 686 aaKnown RBP10.44□□□□□ -0.74
SMC4-205ENST00000465563 HHIPQ96QV1 700 aa10.44□□□□□ -0.74
SMC4-205ENST00000465563 OSMRQ99650 979 aa10.44□□□□□ -0.74
SMC4-205ENST00000465563 EDN3P14138 238 aa10.43□□□□□ -0.74
SMC4-205ENST00000465563 ARL4DP49703 201 aa10.43□□□□□ -0.74
SMC4-205ENST00000465563 ARMC10Q8N2F6 343 aa10.43□□□□□ -0.74
SMC4-205ENST00000465563 SLC7A3Q8WY07 619 aa10.43□□□□□ -0.74
SMC4-205ENST00000465563 NXPE3Q969Y0 559 aa10.43□□□□□ -0.74
SMC4-205ENST00000465563 FAM46AQ96IP4 442 aaKnown RBP10.43□□□□□ -0.74
SMC4-205ENST00000465563 SOX13Q9UN79 622 aa10.43□□□□□ -0.74
SMC4-205ENST00000465563 FZD6O60353 706 aa10.42□□□□□ -0.74
SMC4-205ENST00000465563 ZKSCAN3Q9BRR0 538 aa10.42□□□□□ -0.74
SMC4-205ENST00000465563 IGLV1-40P01703 118 aa10.41□□□□□ -0.74
SMC4-205ENST00000465563 NLRP12P59046 1061 aa10.41□□□□□ -0.74
SMC4-205ENST00000465563 BSNDQ8WZ55 320 aa10.41□□□□□ -0.74
SMC4-205ENST00000465563 ANO2Q9NQ90 1003 aa10.41□□□□□ -0.74
SMC4-205ENST00000465563 FOXD3Q9UJU5 478 aaPredicted RBP10.41□□□□□ -0.74
SMC4-205ENST00000465563 SART1O43290 800 aaKnown RBP10.4□□□□□ -0.74
SMC4-205ENST00000465563 C19orf57Q0VDD7 668 aa10.4□□□□□ -0.74
SMC4-205ENST00000465563 ZNF211Q13398 564 aaPredicted RBP10.4□□□□□ -0.74
SMC4-205ENST00000465563 RNF208Q9H0X6 261 aa10.4□□□□□ -0.74
SMC4-205ENST00000465563 ANKRD34AQ69YU3 496 aa10.39□□□□□ -0.75
SMC4-205ENST00000465563 GJD3Q8N144 294 aa10.39□□□□□ -0.75
SMC4-205ENST00000465563 MYRFLQ96LU7 910 aa10.39□□□□□ -0.75
SMC4-205ENST00000465563 PSMG3-AS1Q96PY0 264 aa10.39□□□□□ -0.75
SMC4-205ENST00000465563 KRTAP4-8Q9BYQ9 185 aa10.39□□□□□ -0.75
SMC4-205ENST00000465563 PCMTD2Q9NV79 361 aa10.39□□□□□ -0.75
SMC4-205ENST00000465563 CCDC87Q9NVE4 849 aa10.39□□□□□ -0.75
SMC4-205ENST00000465563 USTQ9Y2C2 406 aa10.39□□□□□ -0.75
SMC4-205ENST00000465563 AMOTL2Q9Y2J4 779 aa10.39□□□□□ -0.75
SMC4-205ENST00000465563 IKBKEQ14164 716 aa10.38□□□□□ -0.75
SMC4-205ENST00000465563 B4GALNT3Q6L9W6 998 aa10.38□□□□□ -0.75
SMC4-205ENST00000465563 RUSC1Q9BVN2 902 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms