RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 COPRSQ9NQ92 184 aa14.52□□□□□ -0.09
CUX1-207ENST00000465461 DDX19BQ9UMR2 479 aa14.52□□□□□ -0.09
CUX1-207ENST00000465461 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.52□□□□□ -0.09
CUX1-207ENST00000465461 SCN9AQ15858 1988 aa14.52□□□□□ -0.09
CUX1-207ENST00000465461 PDE8BO95263 885 aa14.51□□□□□ -0.09
CUX1-207ENST00000465461 VEGFAP15692 232 aaPredicted RBP14.51□□□□□ -0.09
CUX1-207ENST00000465461 EPS15P42566 896 aa14.51□□□□□ -0.09
CUX1-207ENST00000465461 GYG1P46976 350 aa14.51□□□□□ -0.09
CUX1-207ENST00000465461 GMPSP49915 693 aaPredicted RBP14.51□□□□□ -0.09
CUX1-207ENST00000465461 SCNN1DP51172 638 aa14.51□□□□□ -0.09
CUX1-207ENST00000465461 CEP85Q6P2H3 762 aa14.51□□□□□ -0.09
CUX1-207ENST00000465461 L3MBTL3Q96JM7 780 aaPredicted RBP14.51□□□□□ -0.09
CUX1-207ENST00000465461 ZBTB40Q9NUA8 1239 aa14.51□□□□□ -0.09
CUX1-207ENST00000465461 JAG2Q9Y219 1238 aa14.51□□□□□ -0.09
CUX1-207ENST00000465461 CIAO1O76071 339 aa14.5□□□□□ -0.09
CUX1-207ENST00000465461 POTEIP0CG38 1075 aa14.5□□□□□ -0.09
CUX1-207ENST00000465461 POTEJP0CG39 1038 aa14.5□□□□□ -0.09
CUX1-207ENST00000465461 UBE4AQ14139 1066 aa14.5□□□□□ -0.09
CUX1-207ENST00000465461 POLA2Q14181 598 aa14.5□□□□□ -0.09
CUX1-207ENST00000465461 TNIP1Q15025 636 aa14.5□□□□□ -0.09
CUX1-207ENST00000465461 COA1Q9GZY4 146 aa14.5□□□□□ -0.09
CUX1-207ENST00000465461 CD209Q9NNX6 404 aa14.5□□□□□ -0.09
CUX1-207ENST00000465461 IL15P40933 162 aaPredicted RBP14.49□□□□□ -0.09
CUX1-207ENST00000465461 TFCP2Q12800 502 aa14.49□□□□□ -0.09
CUX1-207ENST00000465461 EAPPQ56P03 285 aaPredicted RBP14.49□□□□□ -0.09
CUX1-207ENST00000465461 C15orf52Q6ZUT6 534 aaKnown RBP14.49□□□□□ -0.09
CUX1-207ENST00000465461 PODNQ7Z5L7 613 aa14.49□□□□□ -0.09
CUX1-207ENST00000465461 C16orf71Q8IYS4 520 aaPredicted RBP14.49□□□□□ -0.09
CUX1-207ENST00000465461 SSH3Q8TE77 659 aa14.49□□□□□ -0.09
CUX1-207ENST00000465461 TAF1DQ9H5J8 278 aaPredicted RBP14.49□□□□□ -0.09
CUX1-207ENST00000465461 HACL1Q9UJ83 578 aa14.49□□□□□ -0.09
CUX1-207ENST00000465461 SUPT16HQ9Y5B9 1047 aaKnown RBP14.49□□□□□ -0.09
CUX1-207ENST00000465461 USP17L3A6NCW0 530 aa14.48□□□□□ -0.09
CUX1-207ENST00000465461 USP17L4A6NCW7 530 aa14.48□□□□□ -0.09
CUX1-207ENST00000465461 SURF6O75683 361 aaKnown RBP14.48□□□□□ -0.09
CUX1-207ENST00000465461 VIL1P09327 827 aaKnown RBP14.48□□□□□ -0.09
CUX1-207ENST00000465461 FGFR2P21802 821 aa14.48□□□□□ -0.09
CUX1-207ENST00000465461 EPHX2P34913 555 aa14.48□□□□□ -0.09
CUX1-207ENST00000465461 BCAMP50895 628 aa14.48□□□□□ -0.09
CUX1-207ENST00000465461 GTF2IP78347 998 aa14.48□□□□□ -0.09
CUX1-207ENST00000465461 USP17L1Q7RTZ2 530 aa14.48□□□□□ -0.09
CUX1-207ENST00000465461 SIRT2Q8IXJ6 389 aa14.48□□□□□ -0.09
CUX1-207ENST00000465461 FAM84BQ96KN1 310 aaPredicted RBP14.48□□□□□ -0.09
CUX1-207ENST00000465461 CRBNQ96SW2 442 aa14.48□□□□□ -0.09
CUX1-207ENST00000465461 CEP126Q9P2H0 1117 aa14.48□□□□□ -0.09
CUX1-207ENST00000465461 IQSEC3Q9UPP2 1182 aaPredicted RBP14.48□□□□□ -0.09
CUX1-207ENST00000465461 IQCA1LA6NCM1 817 aa14.47□□□□□ -0.09
CUX1-207ENST00000465461 LMOD1P29536 600 aaPredicted RBP14.47□□□□□ -0.09
CUX1-207ENST00000465461 HIBADHP31937 336 aaKnown RBP14.47□□□□□ -0.09
CUX1-207ENST00000465461 G3BP1Q13283 466 aaKnown RBP eCLIP14.47□□□□□ -0.09
CUX1-207ENST00000465461 PUM3Q15397 648 aaKnown RBP14.47□□□□□ -0.09
CUX1-207ENST00000465461 ZNF804AQ7Z570 1209 aa14.47□□□□□ -0.09
CUX1-207ENST00000465461 GPRC5DQ9NZD1 345 aa14.47□□□□□ -0.09
CUX1-207ENST00000465461 CNOT7Q9UIV1 285 aaKnown RBP14.47□□□□□ -0.09
CUX1-207ENST00000465461 FBXO3Q9UK99 471 aa14.47□□□□□ -0.09
CUX1-207ENST00000465461 TOMM70O94826 608 aa14.46□□□□□ -0.09
CUX1-207ENST00000465461 SASH1O94885 1247 aa14.46□□□□□ -0.09
CUX1-207ENST00000465461 IL1R1P14778 569 aa14.46□□□□□ -0.09
CUX1-207ENST00000465461 ADORA1P30542 326 aa14.46□□□□□ -0.09
CUX1-207ENST00000465461 TIMM10P62072 90 aa14.46□□□□□ -0.09
CUX1-207ENST00000465461 ATP2B3Q16720 1220 aa14.46□□□□□ -0.09
CUX1-207ENST00000465461 DACT2Q5SW24 774 aa14.46□□□□□ -0.09
CUX1-207ENST00000465461 RBM26Q5T8P6 1007 aaKnown RBP14.46□□□□□ -0.09
CUX1-207ENST00000465461 TTLL5Q6EMB2 1281 aa14.46□□□□□ -0.09
CUX1-207ENST00000465461 RSBN1LQ6PCB5 846 aaPredicted RBP14.46□□□□□ -0.09
CUX1-207ENST00000465461 MICALL2Q8IY33 904 aa14.46□□□□□ -0.09
CUX1-207ENST00000465461 SCN4AP35499 1836 aa14.45□□□□□ -0.1
CUX1-207ENST00000465461 EGFRP00533 1210 aa14.45□□□□□ -0.1
CUX1-207ENST00000465461 IFIT1P09914 478 aaKnown RBP14.45□□□□□ -0.1
CUX1-207ENST00000465461 SLC5A1P13866 664 aa14.45□□□□□ -0.1
CUX1-207ENST00000465461 C1QTNF8P60827 252 aa14.45□□□□□ -0.1
CUX1-207ENST00000465461 OS9Q13438 667 aaPredicted RBP14.45□□□□□ -0.1
CUX1-207ENST00000465461 SAMD7Q7Z3H4 446 aa14.45□□□□□ -0.1
CUX1-207ENST00000465461 FBXO33Q7Z6M2 555 aa14.45□□□□□ -0.1
CUX1-207ENST00000465461 VPS37DQ86XT2 251 aa14.45□□□□□ -0.1
CUX1-207ENST00000465461 TRPM4Q8TD43 1214 aa14.45□□□□□ -0.1
CUX1-207ENST00000465461 LPIN2Q92539 896 aa14.45□□□□□ -0.1
CUX1-207ENST00000465461 CLEC11AQ9Y240 323 aa14.45□□□□□ -0.1
CUX1-207ENST00000465461 EXOC6BQ9Y2D4 811 aa14.45□□□□□ -0.1
CUX1-207ENST00000465461 ZNF646O15015 1829 aaPredicted RBP14.44□□□□□ -0.1
CUX1-207ENST00000465461 APBB1O00213 710 aa14.44□□□□□ -0.1
CUX1-207ENST00000465461 HIRAP54198 1017 aaPredicted RBP14.44□□□□□ -0.1
CUX1-207ENST00000465461 TBC1D10BQ4KMP7 808 aaPredicted RBP14.44□□□□□ -0.1
CUX1-207ENST00000465461 CAVIN4Q5BKX8 364 aa14.44□□□□□ -0.1
CUX1-207ENST00000465461 STRIP1Q5VSL9 837 aa14.44□□□□□ -0.1
CUX1-207ENST00000465461 RPAP2Q8IXW5 612 aaPredicted RBP14.44□□□□□ -0.1
CUX1-207ENST00000465461 CERS5Q8N5B7 392 aa14.44□□□□□ -0.1
CUX1-207ENST00000465461 TDRD7Q8NHU6 1098 aaKnown RBP14.44□□□□□ -0.1
CUX1-207ENST00000465461 NEUROD6Q96NK8 337 aa14.44□□□□□ -0.1
CUX1-207ENST00000465461 BCL11AQ9H165 835 aa14.44□□□□□ -0.1
CUX1-207ENST00000465461 PSME4Q14997 1843 aa14.43□□□□□ -0.1
CUX1-207ENST00000465461 A0A1B0GUL7 405 aa14.43□□□□□ -0.1
CUX1-207ENST00000465461 F8W031 263 aaPredicted RBP14.43□□□□□ -0.1
CUX1-207ENST00000465461 H7C1D1 291 aa14.43□□□□□ -0.1
CUX1-207ENST00000465461 CHAF1AQ13111 956 aaPredicted RBP14.43□□□□□ -0.1
CUX1-207ENST00000465461 RBM46Q8TBY0 533 aaKnown RBP14.43□□□□□ -0.1
CUX1-207ENST00000465461 DPF2Q92785 391 aa14.43□□□□□ -0.1
CUX1-207ENST00000465461 GMLQ99445 158 aa14.43□□□□□ -0.1
CUX1-207ENST00000465461 CHMP4BQ9H444 224 aaKnown RBP14.43□□□□□ -0.1
CUX1-207ENST00000465461 ADARB2Q9NS39 739 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms