RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 CIAPIN1Q6FI81 312 aa17■□□□□ 0.31
LIMD1-203ENST00000465039 CEP126Q9P2H0 1117 aa17■□□□□ 0.31
LIMD1-203ENST00000465039 MYO3BQ8WXR4 1341 aa16.99■□□□□ 0.31
LIMD1-203ENST00000465039 ARAP2Q8WZ64 1704 aa16.99■□□□□ 0.31
LIMD1-203ENST00000465039 YDJCA8MPS7 323 aa16.99■□□□□ 0.31
LIMD1-203ENST00000465039 RIMBP2O15034 1052 aa16.99■□□□□ 0.31
LIMD1-203ENST00000465039 TAF5LO75529 589 aa16.99■□□□□ 0.31
LIMD1-203ENST00000465039 IFIT1P09914 478 aaKnown RBP16.99■□□□□ 0.31
LIMD1-203ENST00000465039 FGFR2P21802 821 aa16.99■□□□□ 0.31
LIMD1-203ENST00000465039 HSP90AB4PQ58FF6 505 aa16.99■□□□□ 0.31
LIMD1-203ENST00000465039 LPIN2Q92539 896 aa16.99■□□□□ 0.31
LIMD1-203ENST00000465039 AKAP2Q9Y2D5 859 aa16.99■□□□□ 0.31
LIMD1-203ENST00000465039 SCN9AQ15858 1988 aa16.98■□□□□ 0.31
LIMD1-203ENST00000465039 IL1R1P14778 569 aa16.98■□□□□ 0.31
LIMD1-203ENST00000465039 ERC1Q8IUD2 1116 aa16.98■□□□□ 0.31
LIMD1-203ENST00000465039 HELBQ8NG08 1087 aaPredicted RBP16.98■□□□□ 0.31
LIMD1-203ENST00000465039 DPF2Q92785 391 aa16.98■□□□□ 0.31
LIMD1-203ENST00000465039 C1orf115Q9H7X2 142 aa16.98■□□□□ 0.31
LIMD1-203ENST00000465039 DBNDD1Q9H9R9 158 aa16.98■□□□□ 0.31
LIMD1-203ENST00000465039 GPR108Q9NPR9 543 aa16.98■□□□□ 0.31
LIMD1-203ENST00000465039 DDNO94850 711 aaPredicted RBP16.97■□□□□ 0.31
LIMD1-203ENST00000465039 SLC5A1P13866 664 aa16.97■□□□□ 0.31
LIMD1-203ENST00000465039 G3BP1Q13283 466 aaKnown RBP eCLIP16.97■□□□□ 0.31
LIMD1-203ENST00000465039 CAVIN4Q5BKX8 364 aa16.97■□□□□ 0.31
LIMD1-203ENST00000465039 STRIP1Q5VSL9 837 aa16.97■□□□□ 0.31
LIMD1-203ENST00000465039 GPR101Q96P66 508 aaPredicted RBP16.97■□□□□ 0.31
LIMD1-203ENST00000465039 SIL1Q9H173 461 aa16.97■□□□□ 0.31
LIMD1-203ENST00000465039 PA2G4Q9UQ80 394 aaKnown RBP16.97■□□□□ 0.31
LIMD1-203ENST00000465039 ZNF646O15015 1829 aaPredicted RBP16.96■□□□□ 0.31
LIMD1-203ENST00000465039 USP17L3A6NCW0 530 aa16.96■□□□□ 0.31
LIMD1-203ENST00000465039 USP17L4A6NCW7 530 aa16.96■□□□□ 0.31
LIMD1-203ENST00000465039 VIL1P09327 827 aaKnown RBP16.96■□□□□ 0.31
LIMD1-203ENST00000465039 LMOD1P29536 600 aaPredicted RBP16.96■□□□□ 0.31
LIMD1-203ENST00000465039 FKBP1AP62942 108 aaKnown RBP16.96■□□□□ 0.31
LIMD1-203ENST00000465039 ATP2B3Q16720 1220 aa16.96■□□□□ 0.31
LIMD1-203ENST00000465039 USP17L1Q7RTZ2 530 aa16.96■□□□□ 0.31
LIMD1-203ENST00000465039 TXNRD3Q86VQ6 643 aa16.96■□□□□ 0.31
LIMD1-203ENST00000465039 AGBL3Q8NEM8 1001 aa16.96■□□□□ 0.31
LIMD1-203ENST00000465039 CD209Q9NNX6 404 aa16.96■□□□□ 0.31
LIMD1-203ENST00000465039 HACL1Q9UJ83 578 aa16.96■□□□□ 0.31
LIMD1-203ENST00000465039 KIF3CO14782 793 aa16.95■□□□□ 0.3
LIMD1-203ENST00000465039 KLRK1P26718 216 aa16.95■□□□□ 0.3
LIMD1-203ENST00000465039 HIBADHP31937 336 aaKnown RBP16.95■□□□□ 0.3
LIMD1-203ENST00000465039 DOK7Q18PE1 504 aa16.95■□□□□ 0.3
LIMD1-203ENST00000465039 FBXO33Q7Z6M2 555 aa16.95■□□□□ 0.3
LIMD1-203ENST00000465039 PNMA8AQ86V59 439 aaPredicted RBP16.95■□□□□ 0.3
LIMD1-203ENST00000465039 NMRK2Q9NPI5 230 aa16.95■□□□□ 0.3
LIMD1-203ENST00000465039 GPRC5DQ9NZD1 345 aa16.95■□□□□ 0.3
LIMD1-203ENST00000465039 WTIPA6NIX2 430 aaPredicted RBP16.94■□□□□ 0.3
LIMD1-203ENST00000465039 SEMA3EO15041 775 aa16.94■□□□□ 0.3
LIMD1-203ENST00000465039 SURF6O75683 361 aaKnown RBP16.94■□□□□ 0.3
LIMD1-203ENST00000465039 RAD17O75943 681 aa16.94■□□□□ 0.3
LIMD1-203ENST00000465039 SASH1O94885 1247 aa16.94■□□□□ 0.3
LIMD1-203ENST00000465039 SCNN1DP51172 638 aa16.94■□□□□ 0.3
LIMD1-203ENST00000465039 TDRD7Q8NHU6 1098 aaKnown RBP16.94■□□□□ 0.3
LIMD1-203ENST00000465039 ZNF526Q8TF50 670 aaPredicted RBP16.94■□□□□ 0.3
LIMD1-203ENST00000465039 FAM84BQ96KN1 310 aaPredicted RBP16.94■□□□□ 0.3
LIMD1-203ENST00000465039 FAM205AQ6ZU69 1335 aa16.94■□□□□ 0.3
LIMD1-203ENST00000465039 POTECB2RU33 542 aa16.93■□□□□ 0.3
LIMD1-203ENST00000465039 PSMD14O00487 310 aa16.93■□□□□ 0.3
LIMD1-203ENST00000465039 DACT2Q5SW24 774 aa16.93■□□□□ 0.3
LIMD1-203ENST00000465039 RSBN1LQ6PCB5 846 aaPredicted RBP16.93■□□□□ 0.3
LIMD1-203ENST00000465039 VPS37DQ86XT2 251 aa16.93■□□□□ 0.3
LIMD1-203ENST00000465039 GJA3Q9Y6H8 435 aa16.93■□□□□ 0.3
LIMD1-203ENST00000465039 PDS5AQ29RF7 1337 aaKnown RBP16.93■□□□□ 0.3
LIMD1-203ENST00000465039 ADAMTSL1Q8N6G6 1762 aa16.92■□□□□ 0.3
LIMD1-203ENST00000465039 SNAP23O00161 211 aa16.92■□□□□ 0.3
LIMD1-203ENST00000465039 RAB11FIP3O75154 756 aa16.92■□□□□ 0.3
LIMD1-203ENST00000465039 TOMM70O94826 608 aa16.92■□□□□ 0.3
LIMD1-203ENST00000465039 GMPSP49915 693 aaPredicted RBP16.92■□□□□ 0.3
LIMD1-203ENST00000465039 OS9Q13438 667 aaPredicted RBP16.92■□□□□ 0.3
LIMD1-203ENST00000465039 SIRT2Q8IXJ6 389 aa16.92■□□□□ 0.3
LIMD1-203ENST00000465039 RBM46Q8TBY0 533 aaKnown RBP16.92■□□□□ 0.3
LIMD1-203ENST00000465039 GMLQ99445 158 aa16.92■□□□□ 0.3
LIMD1-203ENST00000465039 TAF1DQ9H5J8 278 aaPredicted RBP16.92■□□□□ 0.3
LIMD1-203ENST00000465039 GNL3LQ9NVN8 582 aaKnown RBP16.92■□□□□ 0.3
LIMD1-203ENST00000465039 EPHX2P34913 555 aa16.91■□□□□ 0.3
LIMD1-203ENST00000465039 TFCP2Q12800 502 aa16.91■□□□□ 0.3
LIMD1-203ENST00000465039 USP50Q70EL3 339 aaPredicted RBP16.91■□□□□ 0.3
LIMD1-203ENST00000465039 C16orf71Q8IYS4 520 aaPredicted RBP16.91■□□□□ 0.3
LIMD1-203ENST00000465039 TBC1D22AQ8WUA7 517 aa16.91■□□□□ 0.3
LIMD1-203ENST00000465039 RRAGCQ9HB90 399 aa16.91■□□□□ 0.3
LIMD1-203ENST00000465039 ADARB2Q9NS39 739 aaKnown RBP16.91■□□□□ 0.3
LIMD1-203ENST00000465039 A0A1B0GUL7 405 aa16.9■□□□□ 0.3
LIMD1-203ENST00000465039 H7C1D1 291 aa16.9■□□□□ 0.3
LIMD1-203ENST00000465039 GYG1P46976 350 aa16.9■□□□□ 0.3
LIMD1-203ENST00000465039 ZNF280AP59817 542 aaPredicted RBP16.9■□□□□ 0.3
LIMD1-203ENST00000465039 TTLL5Q6EMB2 1281 aa16.9■□□□□ 0.3
LIMD1-203ENST00000465039 SUGT1Q9Y2Z0 365 aa16.9■□□□□ 0.3
LIMD1-203ENST00000465039 SUPT16HQ9Y5B9 1047 aaKnown RBP16.9■□□□□ 0.3
LIMD1-203ENST00000465039 IGSF3O75054 1194 aa16.89■□□□□ 0.29
LIMD1-203ENST00000465039 FSTL1Q12841 308 aa16.89■□□□□ 0.29
LIMD1-203ENST00000465039 LDHDQ86WU2 507 aa16.89■□□□□ 0.29
LIMD1-203ENST00000465039 ZC3H15Q8WU90 426 aaKnown RBP16.89■□□□□ 0.29
LIMD1-203ENST00000465039 KIF1BPQ96EK5 621 aa16.89■□□□□ 0.29
LIMD1-203ENST00000465039 CRBNQ96SW2 442 aa16.89■□□□□ 0.29
LIMD1-203ENST00000465039 MYH13Q9UKX3 1938 aa16.89■□□□□ 0.29
LIMD1-203ENST00000465039 USP17L8P0C7I0 530 aa16.88■□□□□ 0.29
LIMD1-203ENST00000465039 GTF2IP78347 998 aa16.88■□□□□ 0.29
LIMD1-203ENST00000465039 TNNI3KQ59H18 835 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms